RNA–Protein interactions for RNA: ENST00000568814.1

HERPUD1-216, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 509 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-216ENST00000568814 TAF7Q15545 349 aaPredicted RBP13.33□□□□□ -0.28
HERPUD1-216ENST00000568814 SBF2Q86WG5 1849 aa13.33□□□□□ -0.28
HERPUD1-216ENST00000568814 PRIM1P49642 420 aaKnown RBP13.32□□□□□ -0.28
HERPUD1-216ENST00000568814 GNAI1P63096 354 aa13.32□□□□□ -0.28
HERPUD1-216ENST00000568814 GOLGA2Q08379 1002 aa13.32□□□□□ -0.28
HERPUD1-216ENST00000568814 FAM182BQ5T319 152 aa13.32□□□□□ -0.28
HERPUD1-216ENST00000568814 SYTL4Q96C24 671 aaPredicted RBP13.32□□□□□ -0.28
HERPUD1-216ENST00000568814 THUMPD2Q9BTF0 503 aaKnown RBP13.32□□□□□ -0.28
HERPUD1-216ENST00000568814 IFT57Q9NWB7 429 aa13.32□□□□□ -0.28
HERPUD1-216ENST00000568814 KAT6BQ8WYB5 2073 aa13.32□□□□□ -0.28
HERPUD1-216ENST00000568814 NFATC2IPQ8NCF5 419 aa13.31□□□□□ -0.28
HERPUD1-216ENST00000568814 ACSBG1Q96GR2 724 aa13.31□□□□□ -0.28
HERPUD1-216ENST00000568814 CFAP44Q96MT7 982 aa13.31□□□□□ -0.28
HERPUD1-216ENST00000568814 YTHDC1Q96MU7 727 aaKnown RBP13.31□□□□□ -0.28
HERPUD1-216ENST00000568814 BCL11BQ9C0K0 894 aaPredicted RBP13.31□□□□□ -0.28
HERPUD1-216ENST00000568814 BTBD11A6QL63 1104 aa13.3□□□□□ -0.28
HERPUD1-216ENST00000568814 E9PSI1 815 aa13.3□□□□□ -0.28
HERPUD1-216ENST00000568814 DEFB132Q7Z7B7 95 aa13.3□□□□□ -0.28
HERPUD1-216ENST00000568814 PIGBQ92521 554 aa13.3□□□□□ -0.28
HERPUD1-216ENST00000568814 MYH16Q9H6N6 1097 aa13.3□□□□□ -0.28
HERPUD1-216ENST00000568814 PAPPAQ13219 1627 aa13.3□□□□□ -0.28
HERPUD1-216ENST00000568814 PSDA5PKW4 1024 aaPredicted RBP13.29□□□□□ -0.28
HERPUD1-216ENST00000568814 CHL1O00533 1208 aa13.29□□□□□ -0.28
HERPUD1-216ENST00000568814 ZNF853P0CG23 659 aa13.29□□□□□ -0.28
HERPUD1-216ENST00000568814 TTC5Q8N0Z6 440 aa13.29□□□□□ -0.28
HERPUD1-216ENST00000568814 SMARCC1Q92922 1105 aaPredicted RBP13.29□□□□□ -0.28
HERPUD1-216ENST00000568814 TSPYL4Q9UJ04 414 aa13.29□□□□□ -0.28
HERPUD1-216ENST00000568814 KDM3BQ7LBC6 1761 aa13.29□□□□□ -0.28
HERPUD1-216ENST00000568814 BTAF1O14981 1849 aa13.29□□□□□ -0.28
HERPUD1-216ENST00000568814 KCNQ2O43526 872 aa13.28□□□□□ -0.28
HERPUD1-216ENST00000568814 LAS1LQ9Y4W2 734 aaKnown RBP13.28□□□□□ -0.28
HERPUD1-216ENST00000568814 TRIM37O94972 964 aa13.27□□□□□ -0.29
HERPUD1-216ENST00000568814 ZNF790Q6PG37 636 aa13.27□□□□□ -0.29
HERPUD1-216ENST00000568814 SLFN5Q08AF3 891 aa13.26□□□□□ -0.29
HERPUD1-216ENST00000568814 UBR2Q8IWV8 1755 aa13.26□□□□□ -0.29
HERPUD1-216ENST00000568814 TNS1Q9HBL0 1735 aaKnown RBP13.26□□□□□ -0.29
HERPUD1-216ENST00000568814 MBIPQ9NS73 344 aa13.26□□□□□ -0.29
HERPUD1-216ENST00000568814 PALLDQ8WX93 1383 aa13.25□□□□□ -0.29
HERPUD1-216ENST00000568814 FANCIQ9NVI1 1328 aa13.25□□□□□ -0.29
HERPUD1-216ENST00000568814 CCDC125Q86Z20 511 aa13.25□□□□□ -0.29
HERPUD1-216ENST00000568814 FMNL2Q96PY5 1086 aa13.25□□□□□ -0.29
HERPUD1-216ENST00000568814 ATG3Q9NT62 314 aa13.25□□□□□ -0.29
HERPUD1-216ENST00000568814 ASAP1Q9ULH1 1129 aa13.25□□□□□ -0.29
HERPUD1-216ENST00000568814 RGPD3A6NKT7 1758 aaPredicted RBP13.25□□□□□ -0.29
HERPUD1-216ENST00000568814 RGPD4Q7Z3J3 1758 aa13.25□□□□□ -0.29
HERPUD1-216ENST00000568814 KCPQ6ZWJ8 1503 aa13.24□□□□□ -0.29
HERPUD1-216ENST00000568814 SOS1Q07889 1333 aaPredicted RBP13.24□□□□□ -0.29
HERPUD1-216ENST00000568814 HMGB2P26583 209 aaKnown RBP13.24□□□□□ -0.29
HERPUD1-216ENST00000568814 SLC39A6Q13433 755 aa13.24□□□□□ -0.29
HERPUD1-216ENST00000568814 SF3B2Q13435 895 aaKnown RBP13.24□□□□□ -0.29
HERPUD1-216ENST00000568814 MIS18AQ9NYP9 233 aa13.24□□□□□ -0.29
HERPUD1-216ENST00000568814 ZNF831Q5JPB2 1677 aa13.24□□□□□ -0.29
HERPUD1-216ENST00000568814 CICQ96RK0 1608 aaPredicted RBP13.24□□□□□ -0.29
HERPUD1-216ENST00000568814 YY1P25490 414 aa13.23□□□□□ -0.29
HERPUD1-216ENST00000568814 EIF4A1P60842 406 aaKnown RBP13.23□□□□□ -0.29
HERPUD1-216ENST00000568814 TRMT2AQ8IZ69 625 aaKnown RBP13.23□□□□□ -0.29
HERPUD1-216ENST00000568814 VSIG10Q8N0Z9 540 aa13.23□□□□□ -0.29
HERPUD1-216ENST00000568814 TSR2Q969E8 191 aaKnown RBP13.23□□□□□ -0.29
HERPUD1-216ENST00000568814 CDCA7LQ96GN5 454 aa13.23□□□□□ -0.29
HERPUD1-216ENST00000568814 CHMP4AQ9BY43 222 aa13.23□□□□□ -0.29
HERPUD1-216ENST00000568814 SPINK5Q9NQ38 1064 aaPredicted RBP13.23□□□□□ -0.29
HERPUD1-216ENST00000568814 LY75O60449 1722 aa13.22□□□□□ -0.29
HERPUD1-216ENST00000568814 PLSCR1O15162 318 aa13.22□□□□□ -0.29
HERPUD1-216ENST00000568814 APBA3O96018 575 aa13.22□□□□□ -0.29
HERPUD1-216ENST00000568814 HOXB7P09629 217 aa13.22□□□□□ -0.29
HERPUD1-216ENST00000568814 DUSP27Q5VZP5 1158 aa13.22□□□□□ -0.29
HERPUD1-216ENST00000568814 PTF1AQ7RTS3 328 aa13.22□□□□□ -0.29
HERPUD1-216ENST00000568814 ZNF496Q96IT1 587 aaPredicted RBP13.22□□□□□ -0.29
HERPUD1-216ENST00000568814 HEG1Q9ULI3 1381 aa13.21□□□□□ -0.29
HERPUD1-216ENST00000568814 KCNQ3O43525 872 aa13.21□□□□□ -0.29
HERPUD1-216ENST00000568814 PTCD1O75127 700 aaKnown RBP13.21□□□□□ -0.29
HERPUD1-216ENST00000568814 CT47B1P0C2W7 299 aaPredicted RBP13.21□□□□□ -0.29
HERPUD1-216ENST00000568814 BAG6P46379 1132 aa13.21□□□□□ -0.29
HERPUD1-216ENST00000568814 RBM42Q9BTD8 480 aaKnown RBP13.21□□□□□ -0.29
HERPUD1-216ENST00000568814 TEX13AQ9BXU3 409 aaPredicted RBP13.21□□□□□ -0.29
HERPUD1-216ENST00000568814 LOC102724428A0A0B4J2F2 783 aa13.2□□□□□ -0.3
HERPUD1-216ENST00000568814 SNRPA1P09661 255 aaKnown RBP13.2□□□□□ -0.3
HERPUD1-216ENST00000568814 SIK1P57059 783 aa13.2□□□□□ -0.3
HERPUD1-216ENST00000568814 SLC27A3Q5K4L6 730 aa13.2□□□□□ -0.3
HERPUD1-216ENST00000568814 LAMB4A4D0S4 1761 aa13.2□□□□□ -0.3
HERPUD1-216ENST00000568814 GIGYF1O75420 1035 aaPredicted RBP13.19□□□□□ -0.3
HERPUD1-216ENST00000568814 EXOSC9Q06265 439 aaKnown RBP13.19□□□□□ -0.3
HERPUD1-216ENST00000568814 CCNL1Q9UK58 526 aaPredicted RBP13.19□□□□□ -0.3
HERPUD1-216ENST00000568814 ATP6V1AP38606 617 aa13.18□□□□□ -0.3
HERPUD1-216ENST00000568814 TWISTNBQ3B726 338 aaPredicted RBP13.18□□□□□ -0.3
HERPUD1-216ENST00000568814 ZNF428Q96B54 188 aa13.18□□□□□ -0.3
HERPUD1-216ENST00000568814 TJP1Q07157 1748 aa13.18□□□□□ -0.3
HERPUD1-216ENST00000568814 C5P01031 1676 aa13.18□□□□□ -0.3
HERPUD1-216ENST00000568814 STARD3NLO95772 234 aa13.17□□□□□ -0.3
HERPUD1-216ENST00000568814 C8orf58Q8NAV2 365 aa13.17□□□□□ -0.3
HERPUD1-216ENST00000568814 ERBB4Q15303 1308 aa13.16□□□□□ -0.3
HERPUD1-216ENST00000568814 TXNRD1Q16881 649 aa13.16□□□□□ -0.3
HERPUD1-216ENST00000568814 KRT24Q2M2I5 525 aa13.16□□□□□ -0.3
HERPUD1-216ENST00000568814 IFFO2Q5TF58 517 aa13.16□□□□□ -0.3
HERPUD1-216ENST00000568814 SLC4A9Q96Q91 983 aa13.16□□□□□ -0.3
HERPUD1-216ENST00000568814 COL5A3P25940 1745 aaPredicted RBP13.16□□□□□ -0.3
HERPUD1-216ENST00000568814 HDGFL1Q5TGJ6 251 aa13.15□□□□□ -0.3
HERPUD1-216ENST00000568814 DNAJC10Q8IXB1 793 aa13.15□□□□□ -0.3
HERPUD1-216ENST00000568814 TSPYL6Q8N831 410 aa13.15□□□□□ -0.3
HERPUD1-216ENST00000568814 CAMKK2Q96RR4 588 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms