RNA–Protein interactions for RNA: ENST00000566557.5

SCAMP2-208, Transcript of secretory carrier membrane protein 2, humanhuman

TSL 2

Gene SCAMP2, Length 585 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP2-208ENST00000566557 DCAF5Q96JK2 942 aa21.67■■□□□ 1.06
SCAMP2-208ENST00000566557 CASZ1Q86V15 1759 aa21.66■■□□□ 1.06
SCAMP2-208ENST00000566557 CCDC146Q8IYE0 955 aa21.66■■□□□ 1.06
SCAMP2-208ENST00000566557 RGPD3A6NKT7 1758 aaPredicted RBP21.66■■□□□ 1.06
SCAMP2-208ENST00000566557 RGPD4Q7Z3J3 1758 aa21.66■■□□□ 1.06
SCAMP2-208ENST00000566557 ARXQ96QS3 562 aa21.65■■□□□ 1.06
SCAMP2-208ENST00000566557 TMOD3Q9NYL9 352 aa21.65■■□□□ 1.06
SCAMP2-208ENST00000566557 SGIP1Q9BQI5 828 aa21.64■■□□□ 1.05
SCAMP2-208ENST00000566557 ADAMTS8Q9UP79 889 aa21.64■■□□□ 1.05
SCAMP2-208ENST00000566557 DLG5Q8TDM6 1919 aa21.63■■□□□ 1.05
SCAMP2-208ENST00000566557 GPR162Q16538 588 aa21.63■■□□□ 1.05
SCAMP2-208ENST00000566557 PLEKHF1Q96S99 279 aa21.63■■□□□ 1.05
SCAMP2-208ENST00000566557 GNAT3A8MTJ3 354 aa21.62■■□□□ 1.05
SCAMP2-208ENST00000566557 CABP4P57796 275 aa21.62■■□□□ 1.05
SCAMP2-208ENST00000566557 ADAMTS7Q9UKP4 1686 aa21.61■■□□□ 1.05
SCAMP2-208ENST00000566557 RNMTO43148 476 aaKnown RBP21.61■■□□□ 1.05
SCAMP2-208ENST00000566557 GIGYF1O75420 1035 aaPredicted RBP21.61■■□□□ 1.05
SCAMP2-208ENST00000566557 ERVV-2B6SEH9 535 aa21.6■■□□□ 1.05
SCAMP2-208ENST00000566557 RTF1Q92541 710 aaKnown RBP21.6■■□□□ 1.05
SCAMP2-208ENST00000566557 LGR6Q9HBX8 967 aa21.6■■□□□ 1.05
SCAMP2-208ENST00000566557 GOLGB1Q14789 3259 aaKnown RBP21.6■■□□□ 1.05
SCAMP2-208ENST00000566557 NFE2L2Q16236 605 aa21.59■■□□□ 1.05
SCAMP2-208ENST00000566557 PIGBQ92521 554 aa21.59■■□□□ 1.05
SCAMP2-208ENST00000566557 RUNDC1Q96C34 613 aa21.59■■□□□ 1.05
SCAMP2-208ENST00000566557 MRC1P22897 1456 aa21.58■■□□□ 1.05
SCAMP2-208ENST00000566557 LY75O60449 1722 aa21.58■■□□□ 1.04
SCAMP2-208ENST00000566557 PNISRQ8TF01 805 aaKnown RBP21.57■■□□□ 1.04
SCAMP2-208ENST00000566557 PALLDQ8WX93 1383 aa21.57■■□□□ 1.04
SCAMP2-208ENST00000566557 TEFQ10587 303 aa21.56■■□□□ 1.04
SCAMP2-208ENST00000566557 MCM10Q7L590 875 aa21.56■■□□□ 1.04
SCAMP2-208ENST00000566557 FAM9BQ8IZU0 186 aa21.56■■□□□ 1.04
SCAMP2-208ENST00000566557 SLC52A2Q9HAB3 445 aa21.56■■□□□ 1.04
SCAMP2-208ENST00000566557 RRP7AQ9Y3A4 280 aaKnown RBP21.56■■□□□ 1.04
SCAMP2-208ENST00000566557 DCTN1Q14203 1278 aa21.55■■□□□ 1.04
SCAMP2-208ENST00000566557 NEUROD2Q15784 382 aa21.55■■□□□ 1.04
SCAMP2-208ENST00000566557 PELP1Q8IZL8 1130 aaKnown RBP21.55■■□□□ 1.04
SCAMP2-208ENST00000566557 KLHL34Q8N239 644 aa21.55■■□□□ 1.04
SCAMP2-208ENST00000566557 NFATC2IPQ8NCF5 419 aa21.55■■□□□ 1.04
SCAMP2-208ENST00000566557 SIPA1L3O60292 1781 aaPredicted RBP21.54■■□□□ 1.04
SCAMP2-208ENST00000566557 IL17REQ8NFR9 667 aa21.54■■□□□ 1.04
SCAMP2-208ENST00000566557 SMARCC1Q92922 1105 aaPredicted RBP21.54■■□□□ 1.04
SCAMP2-208ENST00000566557 CHD4Q14839 1912 aa21.54■■□□□ 1.04
SCAMP2-208ENST00000566557 TMPOP42166 694 aaKnown RBP21.53■■□□□ 1.04
SCAMP2-208ENST00000566557 RIPK4P57078 832 aa21.53■■□□□ 1.04
SCAMP2-208ENST00000566557 MIER1Q8N108 512 aa21.53■■□□□ 1.04
SCAMP2-208ENST00000566557 ASAP1Q9ULH1 1129 aa21.53■■□□□ 1.04
SCAMP2-208ENST00000566557 PAPPAQ13219 1627 aa21.53■■□□□ 1.04
SCAMP2-208ENST00000566557 CCER2I3L3R5 266 aa21.51■■□□□ 1.03
SCAMP2-208ENST00000566557 HTATSF1O43719 755 aaKnown RBP21.51■■□□□ 1.03
SCAMP2-208ENST00000566557 LMOD3Q0VAK6 560 aa21.51■■□□□ 1.03
SCAMP2-208ENST00000566557 ATG3Q9NT62 314 aa21.51■■□□□ 1.03
SCAMP2-208ENST00000566557 CCNL1Q9UK58 526 aaPredicted RBP21.51■■□□□ 1.03
SCAMP2-208ENST00000566557 CEMIPQ8WUJ3 1361 aa21.5■■□□□ 1.03
SCAMP2-208ENST00000566557 APAF1O14727 1248 aa21.5■■□□□ 1.03
SCAMP2-208ENST00000566557 KCNQ4P56696 695 aa21.5■■□□□ 1.03
SCAMP2-208ENST00000566557 C5P01031 1676 aa21.5■■□□□ 1.03
SCAMP2-208ENST00000566557 RBM42Q9BTD8 480 aaKnown RBP21.49■■□□□ 1.03
SCAMP2-208ENST00000566557 THUMPD2Q9BTF0 503 aaKnown RBP21.49■■□□□ 1.03
SCAMP2-208ENST00000566557 SLC39A6Q13433 755 aa21.48■■□□□ 1.03
SCAMP2-208ENST00000566557 ZNF827Q17R98 1081 aa21.48■■□□□ 1.03
SCAMP2-208ENST00000566557 PTCD1O75127 700 aaKnown RBP21.47■■□□□ 1.03
SCAMP2-208ENST00000566557 POLD1P28340 1107 aa21.47■■□□□ 1.03
SCAMP2-208ENST00000566557 SLC27A3Q5K4L6 730 aa21.47■■□□□ 1.03
SCAMP2-208ENST00000566557 TTC5Q8N0Z6 440 aa21.47■■□□□ 1.03
SCAMP2-208ENST00000566557 LOC102724428A0A0B4J2F2 783 aa21.46■■□□□ 1.03
SCAMP2-208ENST00000566557 SIK1P57059 783 aa21.46■■□□□ 1.03
SCAMP2-208ENST00000566557 LRRC4BQ9NT99 713 aa21.46■■□□□ 1.03
SCAMP2-208ENST00000566557 TAF1LQ8IZX4 1826 aa21.45■■□□□ 1.03
SCAMP2-208ENST00000566557 BTBD11A6QL63 1104 aa21.45■■□□□ 1.02
SCAMP2-208ENST00000566557 SLC16A10Q8TF71 515 aa21.45■■□□□ 1.02
SCAMP2-208ENST00000566557 UBR2Q8IWV8 1755 aa21.45■■□□□ 1.02
SCAMP2-208ENST00000566557 KCPQ6ZWJ8 1503 aa21.44■■□□□ 1.02
SCAMP2-208ENST00000566557 ATP6V1AP38606 617 aa21.43■■□□□ 1.02
SCAMP2-208ENST00000566557 TJP1Q07157 1748 aa21.43■■□□□ 1.02
SCAMP2-208ENST00000566557 C4BP0C0L5 1744 aa21.42■■□□□ 1.02
SCAMP2-208ENST00000566557 KDM3BQ7LBC6 1761 aa21.42■■□□□ 1.02
SCAMP2-208ENST00000566557 NLGN2Q8NFZ4 835 aa21.42■■□□□ 1.02
SCAMP2-208ENST00000566557 ZNF831Q5JPB2 1677 aa21.41■■□□□ 1.02
SCAMP2-208ENST00000566557 TAF7Q15545 349 aaPredicted RBP21.41■■□□□ 1.02
SCAMP2-208ENST00000566557 AKT1S1Q96B36 256 aa21.41■■□□□ 1.02
SCAMP2-208ENST00000566557 TRIM35Q9UPQ4 493 aa21.41■■□□□ 1.02
SCAMP2-208ENST00000566557 SALL2Q9Y467 1007 aaPredicted RBP21.41■■□□□ 1.02
SCAMP2-208ENST00000566557 COL5A3P25940 1745 aaPredicted RBP21.41■■□□□ 1.02
SCAMP2-208ENST00000566557 GRIN3BO60391 1043 aa21.4■■□□□ 1.02
SCAMP2-208ENST00000566557 ZNF790Q6PG37 636 aa21.4■■□□□ 1.02
SCAMP2-208ENST00000566557 LAS1LQ9Y4W2 734 aaKnown RBP21.4■■□□□ 1.02
SCAMP2-208ENST00000566557 ITPK1Q13572 414 aa21.39■■□□□ 1.01
SCAMP2-208ENST00000566557 MIS18AQ9NYP9 233 aa21.39■■□□□ 1.01
SCAMP2-208ENST00000566557 CICQ96RK0 1608 aaPredicted RBP21.39■■□□□ 1.01
SCAMP2-208ENST00000566557 TUBGCP6Q96RT7 1819 aa21.39■■□□□ 1.01
SCAMP2-208ENST00000566557 KCNQ3O43525 872 aa21.38■■□□□ 1.01
SCAMP2-208ENST00000566557 SLC4A9Q96Q91 983 aa21.38■■□□□ 1.01
SCAMP2-208ENST00000566557 TFCP2L1Q9NZI6 479 aa21.38■■□□□ 1.01
SCAMP2-208ENST00000566557 LINC00116Q8NCU8 138 aa21.37■■□□□ 1.01
SCAMP2-208ENST00000566557 AK7Q96M32 723 aa21.37■■□□□ 1.01
SCAMP2-208ENST00000566557 FMNL2Q96PY5 1086 aa21.37■■□□□ 1.01
SCAMP2-208ENST00000566557 TSPYL4Q9UJ04 414 aa21.37■■□□□ 1.01
SCAMP2-208ENST00000566557 PNPLA7Q6ZV29 1317 aa21.36■■□□□ 1.01
SCAMP2-208ENST00000566557 YBX3P16989 372 aaKnown RBP eCLIP21.36■■□□□ 1.013e-7■□□□□ 9.4
SCAMP2-208ENST00000566557 HMGB2P26583 209 aaKnown RBP21.36■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms