RNA–Protein interactions for RNA: ENST00000564578.5

KARS-204, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 5

Gene KARS, Length 1,942 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-204ENST00000564578 NCBP3Q53F19 620 aaKnown RBP16.39■□□□□ 0.21
KARS-204ENST00000564578 LMOD3Q0VAK6 560 aa16.39■□□□□ 0.21
KARS-204ENST00000564578 TEFQ10587 303 aa16.39■□□□□ 0.21
KARS-204ENST00000564578 CCDC27Q2M243 656 aa16.39■□□□□ 0.21
KARS-204ENST00000564578 ATG3Q9NT62 314 aa16.39■□□□□ 0.21
KARS-204ENST00000564578 SALL2Q9Y467 1007 aaPredicted RBP16.39■□□□□ 0.21
KARS-204ENST00000564578 BTAF1O14981 1849 aa16.39■□□□□ 0.21
KARS-204ENST00000564578 DEFB132Q7Z7B7 95 aa16.38■□□□□ 0.21
KARS-204ENST00000564578 WWC1Q8IX03 1113 aa16.38■□□□□ 0.21
KARS-204ENST00000564578 PLSCR1O15162 318 aa16.37■□□□□ 0.21
KARS-204ENST00000564578 SLC39A6Q13433 755 aa16.37■□□□□ 0.21
KARS-204ENST00000564578 PROM2Q8N271 834 aa16.37■□□□□ 0.21
KARS-204ENST00000564578 SIPA1L3O60292 1781 aaPredicted RBP16.36■□□□□ 0.21
KARS-204ENST00000564578 TAF7Q15545 349 aaPredicted RBP16.36■□□□□ 0.21
KARS-204ENST00000564578 EN1Q05925 392 aaPredicted RBP16.35■□□□□ 0.21
KARS-204ENST00000564578 CAMKK2Q96RR4 588 aa16.35■□□□□ 0.21
KARS-204ENST00000564578 MIS18AQ9NYP9 233 aa16.35■□□□□ 0.21
KARS-204ENST00000564578 ZNF521Q96K83 1311 aa16.35■□□□□ 0.21
KARS-204ENST00000564578 PRKCSHP14314 528 aaPredicted RBP16.35■□□□□ 0.21
KARS-204ENST00000564578 SF3B2Q13435 895 aaKnown RBP16.35■□□□□ 0.21
KARS-204ENST00000564578 NGEFQ8N5V2 710 aa16.35■□□□□ 0.21
KARS-204ENST00000564578 BTBD11A6QL63 1104 aa16.34■□□□□ 0.21
KARS-204ENST00000564578 SOCS7O14512 581 aa16.34■□□□□ 0.21
KARS-204ENST00000564578 KCNQ3O43525 872 aa16.34■□□□□ 0.21
KARS-204ENST00000564578 ZNF790Q6PG37 636 aa16.34■□□□□ 0.21
KARS-204ENST00000564578 PALLDQ8WX93 1383 aa16.34■□□□□ 0.21
KARS-204ENST00000564578 ZNF853P0CG23 659 aa16.33■□□□□ 0.2
KARS-204ENST00000564578 BAG6P46379 1132 aa16.33■□□□□ 0.2
KARS-204ENST00000564578 EZH2Q15910 746 aaKnown RBP16.33■□□□□ 0.2
KARS-204ENST00000564578 SLC4A9Q96Q91 983 aa16.33■□□□□ 0.2
KARS-204ENST00000564578 CHL1O00533 1208 aa16.32■□□□□ 0.2
KARS-204ENST00000564578 KCNQ4P56696 695 aa16.32■□□□□ 0.2
KARS-204ENST00000564578 SMARCC1Q92922 1105 aaPredicted RBP16.32■□□□□ 0.2
KARS-204ENST00000564578 LRRC4BQ9NT99 713 aa16.32■□□□□ 0.2
KARS-204ENST00000564578 PTCD1O75127 700 aaKnown RBP16.31■□□□□ 0.2
KARS-204ENST00000564578 TXNRD1Q16881 649 aa16.31■□□□□ 0.2
KARS-204ENST00000564578 CFAP44Q96MT7 982 aa16.31■□□□□ 0.2
KARS-204ENST00000564578 PAPPAQ13219 1627 aa16.31■□□□□ 0.2
KARS-204ENST00000564578 LOC102724428A0A0B4J2F2 783 aa16.31■□□□□ 0.2
KARS-204ENST00000564578 SIK1P57059 783 aa16.31■□□□□ 0.2
KARS-204ENST00000564578 ZNF496Q96IT1 587 aaPredicted RBP16.31■□□□□ 0.2
KARS-204ENST00000564578 SPINK5Q9NQ38 1064 aaPredicted RBP16.31■□□□□ 0.2
KARS-204ENST00000564578 KCPQ6ZWJ8 1503 aa16.3■□□□□ 0.2
KARS-204ENST00000564578 WDR63Q8IWG1 891 aa16.3■□□□□ 0.2
KARS-204ENST00000564578 HNRNPUQ00839 825 aaKnown RBP eCLIP16.29■□□□□ 0.2
KARS-204ENST00000564578 BABAM1Q9NWV8 329 aa16.29■□□□□ 0.2
KARS-204ENST00000564578 LY75O60449 1722 aa16.29■□□□□ 0.2
KARS-204ENST00000564578 CALD1Q05682 793 aaKnown RBP16.29■□□□□ 0.2
KARS-204ENST00000564578 RBM42Q9BTD8 480 aaKnown RBP16.29■□□□□ 0.2
KARS-204ENST00000564578 IFT57Q9NWB7 429 aa16.29■□□□□ 0.2
KARS-204ENST00000564578 TSPYL4Q9UJ04 414 aa16.29■□□□□ 0.2
KARS-204ENST00000564578 LAS1LQ9Y4W2 734 aaKnown RBP16.29■□□□□ 0.2
KARS-204ENST00000564578 RGPD3A6NKT7 1758 aaPredicted RBP16.29■□□□□ 0.2
KARS-204ENST00000564578 RGPD4Q7Z3J3 1758 aa16.29■□□□□ 0.2
KARS-204ENST00000564578 TTC5Q8N0Z6 440 aa16.28■□□□□ 0.2
KARS-204ENST00000564578 MBIPQ9NS73 344 aa16.28■□□□□ 0.2
KARS-204ENST00000564578 IL16Q14005 1332 aa16.28■□□□□ 0.2
KARS-204ENST00000564578 UBR2Q8IWV8 1755 aa16.28■□□□□ 0.2
KARS-204ENST00000564578 EIF4A1P60842 406 aaKnown RBP16.27■□□□□ 0.2
KARS-204ENST00000564578 ITPK1Q13572 414 aa16.27■□□□□ 0.2
KARS-204ENST00000564578 SLC27A3Q5K4L6 730 aa16.27■□□□□ 0.2
KARS-204ENST00000564578 CCNL1Q9UK58 526 aaPredicted RBP16.27■□□□□ 0.2
KARS-204ENST00000564578 KDM3BQ7LBC6 1761 aa16.27■□□□□ 0.2
KARS-204ENST00000564578 HEG1Q9ULI3 1381 aa16.27■□□□□ 0.2
KARS-204ENST00000564578 GNAI1P63096 354 aa16.27■□□□□ 0.19
KARS-204ENST00000564578 ATP6V1AP38606 617 aa16.26■□□□□ 0.19
KARS-204ENST00000564578 PRAMEF22A3QJZ6 481 aa16.25■□□□□ 0.19
KARS-204ENST00000564578 KRT24Q2M2I5 525 aa16.25■□□□□ 0.19
KARS-204ENST00000564578 TSR2Q969E8 191 aaKnown RBP16.25■□□□□ 0.19
KARS-204ENST00000564578 FMNL2Q96PY5 1086 aa16.25■□□□□ 0.19
KARS-204ENST00000564578 VSIG10Q8N0Z9 540 aa16.25■□□□□ 0.19
KARS-204ENST00000564578 CDCA7LQ96GN5 454 aa16.25■□□□□ 0.19
KARS-204ENST00000564578 GOLGA2Q08379 1002 aa16.24■□□□□ 0.19
KARS-204ENST00000564578 ZNF831Q5JPB2 1677 aa16.23■□□□□ 0.19
KARS-204ENST00000564578 RREB1Q92766 1687 aa16.23■□□□□ 0.19
KARS-204ENST00000564578 GIGYF1O75420 1035 aaPredicted RBP16.23■□□□□ 0.19
KARS-204ENST00000564578 DNAJC10Q8IXB1 793 aa16.23■□□□□ 0.19
KARS-204ENST00000564578 LINC00116Q8NCU8 138 aa16.23■□□□□ 0.19
KARS-204ENST00000564578 ANO8Q9HCE9 1232 aaPredicted RBP16.22■□□□□ 0.19
KARS-204ENST00000564578 USP16Q9Y5T5 823 aa16.22■□□□□ 0.19
KARS-204ENST00000564578 FANCIQ9NVI1 1328 aa16.22■□□□□ 0.19
KARS-204ENST00000564578 SNRPA1P09661 255 aaKnown RBP16.21■□□□□ 0.19
KARS-204ENST00000564578 CYP19A1P11511 503 aaPredicted RBP16.21■□□□□ 0.19
KARS-204ENST00000564578 SLFN5Q08AF3 891 aa16.21■□□□□ 0.19
KARS-204ENST00000564578 ZBED9Q6R2W3 1325 aa16.21■□□□□ 0.19
KARS-204ENST00000564578 TRMT2AQ8IZ69 625 aaKnown RBP16.21■□□□□ 0.19
KARS-204ENST00000564578 TJP1Q07157 1748 aa16.21■□□□□ 0.19
KARS-204ENST00000564578 NUP188Q5SRE5 1749 aa16.21■□□□□ 0.19
KARS-204ENST00000564578 CICQ96RK0 1608 aaPredicted RBP16.21■□□□□ 0.19
KARS-204ENST00000564578 C8orf58Q8NAV2 365 aa16.21■□□□□ 0.19
KARS-204ENST00000564578 TAF1LQ8IZX4 1826 aa16.2■□□□□ 0.18
KARS-204ENST00000564578 AKT1S1Q96B36 256 aa16.2■□□□□ 0.18
KARS-204ENST00000564578 SRCAPQ6ZRS2 3230 aa16.2■□□□□ 0.18
KARS-204ENST00000564578 E9PSI1 815 aa16.19■□□□□ 0.18
KARS-204ENST00000564578 ZNF827Q17R98 1081 aa16.19■□□□□ 0.18
KARS-204ENST00000564578 AMIGO3Q86WK7 504 aa16.19■□□□□ 0.18
KARS-204ENST00000564578 TSPYL6Q8N831 410 aa16.19■□□□□ 0.18
KARS-204ENST00000564578 C5P01031 1676 aa16.19■□□□□ 0.18
KARS-204ENST00000564578 INTS5Q6P9B9 1019 aaKnown RBP16.19■□□□□ 0.18
KARS-204ENST00000564578 TEX13AQ9BXU3 409 aaPredicted RBP16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms