RNA–Protein interactions for RNA: ENST00000563683.5

RNF40-204, Transcript of ring finger protein 40, humanhuman

TSL 5 BASIC

Gene RNF40, Length 4,063 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-204ENST00000563683 TTC22Q5TAA0 569 aa12.58□□□□□ -0.4
RNF40-204ENST00000563683 NEUROD6Q96NK8 337 aa12.58□□□□□ -0.4
RNF40-204ENST00000563683 ATP6V1DQ9Y5K8 247 aa12.58□□□□□ -0.4
RNF40-204ENST00000563683 MYOM2P54296 1465 aa12.58□□□□□ -0.4
RNF40-204ENST00000563683 PTPRCP08575 1304 aa12.58□□□□□ -0.4
RNF40-204ENST00000563683 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.57□□□□□ -0.4
RNF40-204ENST00000563683 ATF3P18847 181 aa12.57□□□□□ -0.4
RNF40-204ENST00000563683 ANKRD44Q8N8A2 993 aa12.57□□□□□ -0.4
RNF40-204ENST00000563683 PHF8Q9UPP1 1060 aa12.57□□□□□ -0.4
RNF40-204ENST00000563683 CLTCL1P53675 1640 aa12.57□□□□□ -0.4
RNF40-204ENST00000563683 RBSNQ9H1K0 784 aa12.57□□□□□ -0.4
RNF40-204ENST00000563683 FSD1Q9BTV5 496 aa12.57□□□□□ -0.4
RNF40-204ENST00000563683 LMBRD1Q9NUN5 540 aa12.57□□□□□ -0.4
RNF40-204ENST00000563683 OTUD7AQ8TE49 926 aaPredicted RBP12.57□□□□□ -0.4
RNF40-204ENST00000563683 NEURL4Q96JN8 1562 aa12.56□□□□□ -0.4
RNF40-204ENST00000563683 DDX54Q8TDD1 881 aaKnown RBP12.56□□□□□ -0.4
RNF40-204ENST00000563683 H3BQV1 296 aa12.56□□□□□ -0.4
RNF40-204ENST00000563683 IFFO2Q5TF58 517 aa12.56□□□□□ -0.4
RNF40-204ENST00000563683 G2E3Q7L622 706 aa12.56□□□□□ -0.4
RNF40-204ENST00000563683 LARP6Q9BRS8 491 aaKnown RBP12.56□□□□□ -0.4
RNF40-204ENST00000563683 MAP3K19Q56UN5 1328 aa12.56□□□□□ -0.4
RNF40-204ENST00000563683 PRIM1P49642 420 aaKnown RBP12.56□□□□□ -0.4
RNF40-204ENST00000563683 EYA1Q99502 592 aa12.56□□□□□ -0.4
RNF40-204ENST00000563683 CFAP74Q9C0B2 1584 aa12.56□□□□□ -0.4
RNF40-204ENST00000563683 NPHP1O15259 732 aa12.55□□□□□ -0.4
RNF40-204ENST00000563683 MCM2P49736 904 aa12.55□□□□□ -0.4
RNF40-204ENST00000563683 MPNDQ8N594 471 aa12.55□□□□□ -0.4
RNF40-204ENST00000563683 FAM184AQ8NB25 1140 aa12.55□□□□□ -0.4
RNF40-204ENST00000563683 DCTPP1Q9H773 170 aa12.55□□□□□ -0.4
RNF40-204ENST00000563683 FOSBP53539 338 aa12.55□□□□□ -0.4
RNF40-204ENST00000563683 EVA1CP58658 441 aa12.55□□□□□ -0.4
RNF40-204ENST00000563683 LRSAM1Q6UWE0 723 aa12.55□□□□□ -0.4
RNF40-204ENST00000563683 GNL2Q13823 731 aaKnown RBP12.55□□□□□ -0.4
RNF40-204ENST00000563683 PLEKHM2Q8IWE5 1019 aa12.55□□□□□ -0.4
RNF40-204ENST00000563683 MAP3K4Q9Y6R4 1608 aa12.54□□□□□ -0.4
RNF40-204ENST00000563683 PI4KAP2A4QPH2 592 aa12.54□□□□□ -0.4
RNF40-204ENST00000563683 FIBPO43427 364 aa12.54□□□□□ -0.4
RNF40-204ENST00000563683 MBD3O95983 291 aa12.54□□□□□ -0.4
RNF40-204ENST00000563683 CEP85Q6P2H3 762 aa12.54□□□□□ -0.4
RNF40-204ENST00000563683 PI4KAP1Q8N8J0 262 aa12.54□□□□□ -0.4
RNF40-204ENST00000563683 ZFYVE9O95405 1425 aa12.54□□□□□ -0.4
RNF40-204ENST00000563683 RNF20Q5VTR2 975 aa12.54□□□□□ -0.4
RNF40-204ENST00000563683 REREQ9P2R6 1566 aa12.54□□□□□ -0.4
RNF40-204ENST00000563683 ADGRB2O60241 1585 aa12.54□□□□□ -0.4
RNF40-204ENST00000563683 AACSQ86V21 672 aa12.54□□□□□ -0.4
RNF40-204ENST00000563683 CCDC94Q9BW85 323 aaPredicted RBP12.54□□□□□ -0.4
RNF40-204ENST00000563683 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.53□□□□□ -0.4
RNF40-204ENST00000563683 DNAJC2Q99543 621 aaKnown RBP12.53□□□□□ -0.4
RNF40-204ENST00000563683 CYP2E1P05181 493 aaPredicted RBP12.53□□□□□ -0.4
RNF40-204ENST00000563683 PDE1AP54750 535 aa12.53□□□□□ -0.4
RNF40-204ENST00000563683 HMGN5P82970 282 aaKnown RBP12.53□□□□□ -0.4
RNF40-204ENST00000563683 PPP1R42Q7Z4L9 355 aa12.53□□□□□ -0.4
RNF40-204ENST00000563683 MYO3AQ8NEV4 1616 aa12.53□□□□□ -0.4
RNF40-204ENST00000563683 USP32Q8NFA0 1604 aa12.53□□□□□ -0.4
RNF40-204ENST00000563683 CHAF1AQ13111 956 aaPredicted RBP12.52□□□□□ -0.4
RNF40-204ENST00000563683 UTP14CQ5TAP6 766 aaKnown RBP12.52□□□□□ -0.4
RNF40-204ENST00000563683 KIF1BPQ96EK5 621 aa12.52□□□□□ -0.4
RNF40-204ENST00000563683 HTATSF1O43719 755 aaKnown RBP12.52□□□□□ -0.41
RNF40-204ENST00000563683 DNAAF4Q8WXU2 420 aa12.52□□□□□ -0.41
RNF40-204ENST00000563683 SYTL4Q96C24 671 aaPredicted RBP12.52□□□□□ -0.41
RNF40-204ENST00000563683 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.52□□□□□ -0.41
RNF40-204ENST00000563683 TET3O43151 1660 aa12.52□□□□□ -0.41
RNF40-204ENST00000563683 BRPF1P55201 1214 aaPredicted RBP12.52□□□□□ -0.41
RNF40-204ENST00000563683 ABCA6Q8N139 1617 aa12.52□□□□□ -0.41
RNF40-204ENST00000563683 KIF1BO60333 1816 aa12.51□□□□□ -0.41
RNF40-204ENST00000563683 TATP17735 454 aaPredicted RBP12.51□□□□□ -0.41
RNF40-204ENST00000563683 MLH3Q9UHC1 1453 aa12.51□□□□□ -0.41
RNF40-204ENST00000563683 PRIMPOLQ96LW4 560 aa12.51□□□□□ -0.41
RNF40-204ENST00000563683 TOMM22Q9NS69 142 aa12.51□□□□□ -0.41
RNF40-204ENST00000563683 SPG7Q9UQ90 795 aa12.51□□□□□ -0.41
RNF40-204ENST00000563683 CHL1O00533 1208 aa12.51□□□□□ -0.41
RNF40-204ENST00000563683 STK3Q13188 491 aa12.51□□□□□ -0.41
RNF40-204ENST00000563683 KCNH5Q8NCM2 988 aa12.51□□□□□ -0.41
RNF40-204ENST00000563683 EDC4Q6P2E9 1401 aaKnown RBP12.51□□□□□ -0.41
RNF40-204ENST00000563683 KCNA6P17658 529 aa12.5□□□□□ -0.41
RNF40-204ENST00000563683 GDPD2Q9HCC8 539 aa12.5□□□□□ -0.41
RNF40-204ENST00000563683 SF3A1Q15459 793 aaKnown RBP12.5□□□□□ -0.41
RNF40-204ENST00000563683 BICD2Q8TD16 824 aa12.5□□□□□ -0.41
RNF40-204ENST00000563683 JAKMIP1Q96N16 626 aaKnown RBP12.5□□□□□ -0.41
RNF40-204ENST00000563683 SYCE3A1L190 88 aa12.5□□□□□ -0.41
RNF40-204ENST00000563683 LTKP29376 864 aa12.5□□□□□ -0.41
RNF40-204ENST00000563683 LRRC59Q96AG4 307 aaKnown RBP12.5□□□□□ -0.41
RNF40-204ENST00000563683 CCDC8Q9H0W5 538 aaPredicted RBP12.5□□□□□ -0.41
RNF40-204ENST00000563683 EFCAB6Q5THR3 1501 aa12.5□□□□□ -0.41
RNF40-204ENST00000563683 MYRIPQ8NFW9 859 aa12.49□□□□□ -0.41
RNF40-204ENST00000563683 CHPF2Q9P2E5 772 aa12.49□□□□□ -0.41
RNF40-204ENST00000563683 METP08581 1390 aa12.49□□□□□ -0.41
RNF40-204ENST00000563683 ERC1Q8IUD2 1116 aa12.49□□□□□ -0.41
RNF40-204ENST00000563683 BOLA2Q9H3K6 86 aa12.49□□□□□ -0.41
RNF40-204ENST00000563683 PHAXQ9H814 394 aaKnown RBP12.49□□□□□ -0.41
RNF40-204ENST00000563683 CYP46A1Q9Y6A2 500 aa12.49□□□□□ -0.41
RNF40-204ENST00000563683 NEO1Q92859 1461 aa12.49□□□□□ -0.41
RNF40-204ENST00000563683 TTC21AQ8NDW8 1320 aa12.49□□□□□ -0.41
RNF40-204ENST00000563683 CASTP20810 708 aaKnown RBP12.49□□□□□ -0.41
RNF40-204ENST00000563683 GPT2Q8TD30 523 aa12.49□□□□□ -0.41
RNF40-204ENST00000563683 TSPY26PQ9H489 355 aa12.49□□□□□ -0.41
RNF40-204ENST00000563683 RBM27Q9P2N5 1060 aaKnown RBP12.49□□□□□ -0.41
RNF40-204ENST00000563683 MED14O60244 1454 aa12.48□□□□□ -0.41
RNF40-204ENST00000563683 DMTNQ08495 405 aa12.48□□□□□ -0.41
RNF40-204ENST00000563683 JARID2Q92833 1246 aaPredicted RBP12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms