RNA–Protein interactions for RNA: ENST00000562624.2

LINC02249-202, Transcript of long intergenic non-protein coding RNA 2249, humanhuman

TSL 1 (best) BASIC

Gene LINC02249, Length 4,260 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02249-202ENST00000562624 CCNL1Q9UK58 526 aaPredicted RBP8.4□□□□□ -1.06
LINC02249-202ENST00000562624 TRPM1Q7Z4N2 1603 aa8.4□□□□□ -1.06
LINC02249-202ENST00000562624 RBM6P78332 1123 aaKnown RBP8.4□□□□□ -1.07
LINC02249-202ENST00000562624 PANK1Q8TE04 598 aa8.4□□□□□ -1.07
LINC02249-202ENST00000562624 DCAF5Q96JK2 942 aa8.4□□□□□ -1.07
LINC02249-202ENST00000562624 IQGAP1P46940 1657 aa8.4□□□□□ -1.07
LINC02249-202ENST00000562624 PARD3Q8TEW0 1356 aa8.39□□□□□ -1.07
LINC02249-202ENST00000562624 NKTRP30414 1462 aaKnown RBP8.39□□□□□ -1.07
LINC02249-202ENST00000562624 ATP7BP35670 1465 aa8.39□□□□□ -1.07
LINC02249-202ENST00000562624 TULP4Q9NRJ4 1543 aa8.39□□□□□ -1.07
LINC02249-202ENST00000562624 DIP2AQ14689 1571 aa8.39□□□□□ -1.07
LINC02249-202ENST00000562624 F6X3S4 739 aa8.39□□□□□ -1.07
LINC02249-202ENST00000562624 ZKSCAN2Q63HK3 967 aa8.39□□□□□ -1.07
LINC02249-202ENST00000562624 KCNQ2O43526 872 aa8.38□□□□□ -1.07
LINC02249-202ENST00000562624 RFC4P35249 363 aa8.38□□□□□ -1.07
LINC02249-202ENST00000562624 SKOR2Q2VWA4 1001 aaPredicted RBP8.38□□□□□ -1.07
LINC02249-202ENST00000562624 GORABQ5T7V8 394 aa8.38□□□□□ -1.07
LINC02249-202ENST00000562624 MBIPQ9NS73 344 aa8.38□□□□□ -1.07
LINC02249-202ENST00000562624 KDM5AP29375 1690 aaKnown RBP8.38□□□□□ -1.07
LINC02249-202ENST00000562624 ATP5J2-PTCD1G3V325 749 aa8.38□□□□□ -1.07
LINC02249-202ENST00000562624 GNPATO15228 680 aa8.38□□□□□ -1.07
LINC02249-202ENST00000562624 RNMTO43148 476 aaKnown RBP8.38□□□□□ -1.07
LINC02249-202ENST00000562624 SPATA31A6Q5VVP1 1343 aa8.38□□□□□ -1.07
LINC02249-202ENST00000562624 TNNT3P45378 269 aaPredicted RBP8.38□□□□□ -1.07
LINC02249-202ENST00000562624 BAG6P46379 1132 aa8.38□□□□□ -1.07
LINC02249-202ENST00000562624 CDCA7Q9BWT1 371 aaPredicted RBP8.38□□□□□ -1.07
LINC02249-202ENST00000562624 ASAP1Q9ULH1 1129 aa8.38□□□□□ -1.07
LINC02249-202ENST00000562624 ADGRB1O14514 1584 aa8.37□□□□□ -1.07
LINC02249-202ENST00000562624 KCNQ3O43525 872 aa8.37□□□□□ -1.07
LINC02249-202ENST00000562624 CSPP1Q1MSJ5 1256 aa8.37□□□□□ -1.07
LINC02249-202ENST00000562624 CCDC24Q8N4L8 307 aa8.37□□□□□ -1.07
LINC02249-202ENST00000562624 INSRP06213 1382 aa8.37□□□□□ -1.07
LINC02249-202ENST00000562624 FBXW7Q969H0 707 aa8.37□□□□□ -1.07
LINC02249-202ENST00000562624 C1orf115Q9H7X2 142 aa8.37□□□□□ -1.07
LINC02249-202ENST00000562624 PPLO60437 1756 aa8.37□□□□□ -1.07
LINC02249-202ENST00000562624 PDCL3Q9H2J4 239 aa8.37□□□□□ -1.07
LINC02249-202ENST00000562624 NOB1Q9ULX3 412 aaKnown RBP8.37□□□□□ -1.07
LINC02249-202ENST00000562624 QRICH2Q9H0J4 1663 aa8.36□□□□□ -1.07
LINC02249-202ENST00000562624 A1BGP04217 495 aa8.36□□□□□ -1.07
LINC02249-202ENST00000562624 MSL1Q68DK7 614 aa8.36□□□□□ -1.07
LINC02249-202ENST00000562624 DNAJC10Q8IXB1 793 aa8.36□□□□□ -1.07
LINC02249-202ENST00000562624 SNRPA1P09661 255 aaKnown RBP8.36□□□□□ -1.07
LINC02249-202ENST00000562624 PHKG2P15735 406 aa8.36□□□□□ -1.07
LINC02249-202ENST00000562624 NBPF14Q5TI25 921 aa8.36□□□□□ -1.07
LINC02249-202ENST00000562624 TECPR2O15040 1411 aa8.36□□□□□ -1.07
LINC02249-202ENST00000562624 ZNF496Q96IT1 587 aaPredicted RBP8.36□□□□□ -1.07
LINC02249-202ENST00000562624 CFAP44Q96MT7 982 aa8.36□□□□□ -1.07
LINC02249-202ENST00000562624 FAM196AQ6ZSG2 479 aa8.35□□□□□ -1.07
LINC02249-202ENST00000562624 WDR63Q8IWG1 891 aa8.35□□□□□ -1.07
LINC02249-202ENST00000562624 DZIP1LQ8IYY4 767 aaKnown RBP8.35□□□□□ -1.07
LINC02249-202ENST00000562624 TSPYL6Q8N831 410 aa8.35□□□□□ -1.07
LINC02249-202ENST00000562624 C8orf58Q8NAV2 365 aa8.35□□□□□ -1.07
LINC02249-202ENST00000562624 IL17REQ8NFR9 667 aa8.35□□□□□ -1.07
LINC02249-202ENST00000562624 ISY1Q9ULR0 285 aaKnown RBP8.35□□□□□ -1.07
LINC02249-202ENST00000562624 POLR3AO14802 1390 aaPredicted RBP8.35□□□□□ -1.07
LINC02249-202ENST00000562624 SETBP1Q9Y6X0 1596 aa8.35□□□□□ -1.07
LINC02249-202ENST00000562624 ZNF790Q6PG37 636 aa8.35□□□□□ -1.07
LINC02249-202ENST00000562624 SMARCC1Q92922 1105 aaPredicted RBP8.35□□□□□ -1.07
LINC02249-202ENST00000562624 CHPF2Q9P2E5 772 aa8.35□□□□□ -1.07
LINC02249-202ENST00000562624 TAOK2Q9UL54 1235 aa8.35□□□□□ -1.07
LINC02249-202ENST00000562624 CYP27B1O15528 508 aa8.35□□□□□ -1.07
LINC02249-202ENST00000562624 EN1Q05925 392 aaPredicted RBP8.35□□□□□ -1.07
LINC02249-202ENST00000562624 CHMP5Q9NZZ3 219 aa8.35□□□□□ -1.07
LINC02249-202ENST00000562624 NRXN1Q9ULB1 1477 aa8.35□□□□□ -1.07
LINC02249-202ENST00000562624 MAP3K5Q99683 1374 aa8.35□□□□□ -1.07
LINC02249-202ENST00000562624 SMIM5Q71RC9 77 aa8.34□□□□□ -1.07
LINC02249-202ENST00000562624 MYD88Q99836 296 aa8.34□□□□□ -1.07
LINC02249-202ENST00000562624 RTCBQ9Y3I0 505 aaKnown RBP8.34□□□□□ -1.07
LINC02249-202ENST00000562624 PNPLA6Q8IY17 1366 aa8.34□□□□□ -1.07
LINC02249-202ENST00000562624 CPS1P31327 1500 aa8.34□□□□□ -1.07
LINC02249-202ENST00000562624 MED14O60244 1454 aa8.34□□□□□ -1.07
LINC02249-202ENST00000562624 ESPNB1AK53 854 aa8.34□□□□□ -1.07
LINC02249-202ENST00000562624 PDE4CQ08493 712 aa8.34□□□□□ -1.07
LINC02249-202ENST00000562624 COPS6Q7L5N1 327 aa8.34□□□□□ -1.07
LINC02249-202ENST00000562624 DEFB132Q7Z7B7 95 aa8.34□□□□□ -1.07
LINC02249-202ENST00000562624 SSH1Q8WYL5 1049 aa8.34□□□□□ -1.07
LINC02249-202ENST00000562624 API5Q9BZZ5 524 aaKnown RBP8.34□□□□□ -1.07
LINC02249-202ENST00000562624 KCNJ4P48050 445 aa8.34□□□□□ -1.07
LINC02249-202ENST00000562624 PLCB2Q00722 1185 aa8.34□□□□□ -1.07
LINC02249-202ENST00000562624 IFT57Q9NWB7 429 aa8.34□□□□□ -1.07
LINC02249-202ENST00000562624 SIL1Q9H173 461 aa8.34□□□□□ -1.07
LINC02249-202ENST00000562624 CHMP4BQ9H444 224 aaKnown RBP8.34□□□□□ -1.07
LINC02249-202ENST00000562624 SLC52A2Q9HAB3 445 aa8.34□□□□□ -1.07
LINC02249-202ENST00000562624 NEURL4Q96JN8 1562 aa8.33□□□□□ -1.08
LINC02249-202ENST00000562624 PI4KAP2A4QPH2 592 aa8.33□□□□□ -1.08
LINC02249-202ENST00000562624 PSDA5PKW4 1024 aaPredicted RBP8.33□□□□□ -1.08
LINC02249-202ENST00000562624 UBTFL1P0CB47 393 aaPredicted RBP8.33□□□□□ -1.08
LINC02249-202ENST00000562624 PI4KAP1Q8N8J0 262 aa8.33□□□□□ -1.08
LINC02249-202ENST00000562624 CRBNQ96SW2 442 aa8.33□□□□□ -1.08
LINC02249-202ENST00000562624 SPINK5Q9NQ38 1064 aaPredicted RBP8.33□□□□□ -1.08
LINC02249-202ENST00000562624 SLFN5Q08AF3 891 aa8.33□□□□□ -1.08
LINC02249-202ENST00000562624 XAGE3Q8WTP9 111 aa8.33□□□□□ -1.08
LINC02249-202ENST00000562624 STK32BQ9NY57 414 aa8.33□□□□□ -1.08
LINC02249-202ENST00000562624 TRMT112Q9UI30 125 aaKnown RBP8.33□□□□□ -1.08
LINC02249-202ENST00000562624 DCAF8L1A6NGE4 600 aa8.33□□□□□ -1.08
LINC02249-202ENST00000562624 ZNF771Q7L3S4 317 aaPredicted RBP8.33□□□□□ -1.08
LINC02249-202ENST00000562624 DBF4Q9UBU7 674 aaPredicted RBP8.33□□□□□ -1.08
LINC02249-202ENST00000562624 USP16Q9Y5T5 823 aa8.33□□□□□ -1.08
LINC02249-202ENST00000562624 CPSF1Q10570 1443 aaKnown RBP8.33□□□□□ -1.08
LINC02249-202ENST00000562624 LAMC1P11047 1609 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms