RNA–Protein interactions for RNA: ENST00000562474.1

TSC2-218, Transcript of TSC complex subunit 2, humanhuman

TSL 5

Gene TSC2, Length 589 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-218ENST00000562474 MCM10Q7L590 875 aa14.91□□□□□ -0.02
TSC2-218ENST00000562474 NFATC2IPQ8NCF5 419 aa14.91□□□□□ -0.02
TSC2-218ENST00000562474 GAS2L2Q8NHY3 880 aa14.91□□□□□ -0.02
TSC2-218ENST00000562474 PLEKHF1Q96S99 279 aa14.91□□□□□ -0.02
TSC2-218ENST00000562474 MRS2Q9HD23 443 aa14.91□□□□□ -0.02
TSC2-218ENST00000562474 ADAMTS8Q9UP79 889 aa14.91□□□□□ -0.02
TSC2-218ENST00000562474 COL5A3P25940 1745 aaPredicted RBP14.9□□□□□ -0.02
TSC2-218ENST00000562474 GNAT3A8MTJ3 354 aa14.9□□□□□ -0.02
TSC2-218ENST00000562474 SLC39A6Q13433 755 aa14.9□□□□□ -0.02
TSC2-218ENST00000562474 IL17REQ8NFR9 667 aa14.9□□□□□ -0.02
TSC2-218ENST00000562474 THUMPD2Q9BTF0 503 aaKnown RBP14.9□□□□□ -0.02
TSC2-218ENST00000562474 ATG3Q9NT62 314 aa14.9□□□□□ -0.02
TSC2-218ENST00000562474 CCNL1Q9UK58 526 aaPredicted RBP14.9□□□□□ -0.02
TSC2-218ENST00000562474 MAPK8IP3Q9UPT6 1336 aa14.9□□□□□ -0.02
TSC2-218ENST00000562474 C4BP0C0L5 1744 aa14.89□□□□□ -0.03
TSC2-218ENST00000562474 UBR3Q6ZT12 1888 aa14.89□□□□□ -0.03
TSC2-218ENST00000562474 CASZ1Q86V15 1759 aa14.89□□□□□ -0.03
TSC2-218ENST00000562474 NEUROD2Q15784 382 aa14.89□□□□□ -0.03
TSC2-218ENST00000562474 ERVV-2B6SEH9 535 aa14.88□□□□□ -0.03
TSC2-218ENST00000562474 ZNF827Q17R98 1081 aa14.88□□□□□ -0.03
TSC2-218ENST00000562474 SMIM5Q71RC9 77 aa14.88□□□□□ -0.03
TSC2-218ENST00000562474 RBM42Q9BTD8 480 aaKnown RBP14.88□□□□□ -0.03
TSC2-218ENST00000562474 PDGFDQ9GZP0 370 aaPredicted RBP14.88□□□□□ -0.03
TSC2-218ENST00000562474 QSER1Q2KHR3 1735 aa14.87□□□□□ -0.03
TSC2-218ENST00000562474 PTCD1O75127 700 aaKnown RBP14.87□□□□□ -0.03
TSC2-218ENST00000562474 SLC52A2Q9HAB3 445 aa14.87□□□□□ -0.03
TSC2-218ENST00000562474 KDM3BQ7LBC6 1761 aa14.87□□□□□ -0.03
TSC2-218ENST00000562474 NEFMP07197 916 aa14.86□□□□□ -0.03
TSC2-218ENST00000562474 ITPK1Q13572 414 aa14.86□□□□□ -0.03
TSC2-218ENST00000562474 NFE2L2Q16236 605 aa14.86□□□□□ -0.03
TSC2-218ENST00000562474 SLC4A9Q96Q91 983 aa14.86□□□□□ -0.03
TSC2-218ENST00000562474 KCPQ6ZWJ8 1503 aa14.86□□□□□ -0.03
TSC2-218ENST00000562474 KCNQ3O43525 872 aa14.85□□□□□ -0.03
TSC2-218ENST00000562474 TEFQ10587 303 aa14.85□□□□□ -0.03
TSC2-218ENST00000562474 NBPF14Q5TI25 921 aa14.85□□□□□ -0.03
TSC2-218ENST00000562474 LOC102724428A0A0B4J2F2 783 aa14.84□□□□□ -0.03
TSC2-218ENST00000562474 SIK1P57059 783 aa14.84□□□□□ -0.03
TSC2-218ENST00000562474 LINC00116Q8NCU8 138 aa14.84□□□□□ -0.03
TSC2-218ENST00000562474 RTF1Q92541 710 aaKnown RBP14.84□□□□□ -0.03
TSC2-218ENST00000562474 SMARCC1Q92922 1105 aaPredicted RBP14.84□□□□□ -0.03
TSC2-218ENST00000562474 STK32BQ9NY57 414 aa14.84□□□□□ -0.03
TSC2-218ENST00000562474 ATP6V1AP38606 617 aa14.83□□□□□ -0.04
TSC2-218ENST00000562474 TMPOP42166 694 aaKnown RBP14.83□□□□□ -0.04
TSC2-218ENST00000562474 RIPK4P57078 832 aa14.83□□□□□ -0.04
TSC2-218ENST00000562474 DIEXFQ68CQ4 756 aaKnown RBP14.83□□□□□ -0.04
TSC2-218ENST00000562474 FAM9BQ8IZU0 186 aa14.83□□□□□ -0.04
TSC2-218ENST00000562474 RUNDC1Q96C34 613 aa14.83□□□□□ -0.04
TSC2-218ENST00000562474 MIS18AQ9NYP9 233 aa14.83□□□□□ -0.04
TSC2-218ENST00000562474 ZNF831Q5JPB2 1677 aa14.83□□□□□ -0.04
TSC2-218ENST00000562474 CEMIPQ8WUJ3 1361 aa14.83□□□□□ -0.04
TSC2-218ENST00000562474 SLC15A2Q16348 729 aa14.82□□□□□ -0.04
TSC2-218ENST00000562474 SLC27A3Q5K4L6 730 aa14.82□□□□□ -0.04
TSC2-218ENST00000562474 AMIGO3Q86WK7 504 aa14.82□□□□□ -0.04
TSC2-218ENST00000562474 PNISRQ8TF01 805 aaKnown RBP14.82□□□□□ -0.04
TSC2-218ENST00000562474 C4AP0C0L4 1744 aa14.82□□□□□ -0.04
TSC2-218ENST00000562474 APAF1O14727 1248 aa14.81□□□□□ -0.04
TSC2-218ENST00000562474 AKT1S1Q96B36 256 aa14.81□□□□□ -0.04
TSC2-218ENST00000562474 PHF14O94880 888 aa14.8□□□□□ -0.04
TSC2-218ENST00000562474 DNAJC10Q8IXB1 793 aa14.8□□□□□ -0.04
TSC2-218ENST00000562474 PNNQ9H307 717 aaKnown RBP14.8□□□□□ -0.04
TSC2-218ENST00000562474 CICQ96RK0 1608 aaPredicted RBP14.8□□□□□ -0.04
TSC2-218ENST00000562474 LAMB4A4D0S4 1761 aa14.8□□□□□ -0.04
TSC2-218ENST00000562474 MIER1Q8N108 512 aa14.79□□□□□ -0.04
TSC2-218ENST00000562474 ZNF496Q96IT1 587 aaPredicted RBP14.79□□□□□ -0.04
TSC2-218ENST00000562474 SALL2Q9Y467 1007 aaPredicted RBP14.79□□□□□ -0.04
TSC2-218ENST00000562474 PNPLA7Q6ZV29 1317 aa14.78□□□□□ -0.04
TSC2-218ENST00000562474 BTBD11A6QL63 1104 aa14.78□□□□□ -0.04
TSC2-218ENST00000562474 ZBTB7AO95365 584 aa14.78□□□□□ -0.04
TSC2-218ENST00000562474 TTC5Q8N0Z6 440 aa14.78□□□□□ -0.04
TSC2-218ENST00000562474 TFCP2L1Q9NZI6 479 aa14.78□□□□□ -0.04
TSC2-218ENST00000562474 TRIM35Q9UPQ4 493 aa14.78□□□□□ -0.04
TSC2-218ENST00000562474 PRAMEF22A3QJZ6 481 aa14.77□□□□□ -0.05
TSC2-218ENST00000562474 MSH5O43196 834 aa14.77□□□□□ -0.05
TSC2-218ENST00000562474 ZNF790Q6PG37 636 aa14.77□□□□□ -0.05
TSC2-218ENST00000562474 AK7Q96M32 723 aa14.77□□□□□ -0.05
TSC2-218ENST00000562474 GNPATO15228 680 aa14.76□□□□□ -0.05
TSC2-218ENST00000562474 ATF5Q9Y2D1 282 aaPredicted RBP14.76□□□□□ -0.05
TSC2-218ENST00000562474 LAS1LQ9Y4W2 734 aaKnown RBP14.76□□□□□ -0.05
TSC2-218ENST00000562474 LRP5O75197 1615 aa14.75□□□□□ -0.05
TSC2-218ENST00000562474 HTATSF1O43719 755 aaKnown RBP14.75□□□□□ -0.05
TSC2-218ENST00000562474 PIP4K2AP48426 406 aaPredicted RBP14.75□□□□□ -0.05
TSC2-218ENST00000562474 MSL1Q68DK7 614 aa14.75□□□□□ -0.05
TSC2-218ENST00000562474 COL23A1Q86Y22 540 aaPredicted RBP14.75□□□□□ -0.05
TSC2-218ENST00000562474 HEG1Q9ULI3 1381 aa14.74□□□□□ -0.05
TSC2-218ENST00000562474 TAF7Q15545 349 aaPredicted RBP14.74□□□□□ -0.05
TSC2-218ENST00000562474 CRKLP46109 303 aaKnown RBP14.73□□□□□ -0.05
TSC2-218ENST00000562474 COL24A1Q17RW2 1714 aa14.72□□□□□ -0.05
TSC2-218ENST00000562474 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.72□□□□□ -0.05
TSC2-218ENST00000562474 KRT24Q2M2I5 525 aa14.72□□□□□ -0.05
TSC2-218ENST00000562474 TSPYL4Q9UJ04 414 aa14.72□□□□□ -0.05
TSC2-218ENST00000562474 ZBTB1Q9Y2K1 713 aa14.72□□□□□ -0.05
TSC2-218ENST00000562474 CYP19A1P11511 503 aaPredicted RBP14.71□□□□□ -0.05
TSC2-218ENST00000562474 CANXP27824 592 aaKnown RBP14.71□□□□□ -0.05
TSC2-218ENST00000562474 LMOD3Q0VAK6 560 aa14.71□□□□□ -0.05
TSC2-218ENST00000562474 INTS5Q6P9B9 1019 aaKnown RBP14.71□□□□□ -0.05
TSC2-218ENST00000562474 FMNL2Q96PY5 1086 aa14.71□□□□□ -0.05
TSC2-218ENST00000562474 ZNF330Q9Y3S2 320 aaPredicted RBP14.71□□□□□ -0.05
TSC2-218ENST00000562474 CNTNAP4Q9C0A0 1308 aa14.7□□□□□ -0.06
TSC2-218ENST00000562474 USP16Q9Y5T5 823 aa14.7□□□□□ -0.06
TSC2-218ENST00000562474 A1BGP04217 495 aa14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms