RNA–Protein interactions for RNA: ENST00000562303.5

RPAP1-204, Transcript of RNA polymerase II associated protein 1, humanhuman

TSL 1 (best)

Gene RPAP1, Length 5,897 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1-204ENST00000562303 NAPBQ9H115 298 aa13.15□□□□□ -0.31
RPAP1-204ENST00000562303 U3KPZ7 1027 aaPredicted RBP13.15□□□□□ -0.31
RPAP1-204ENST00000562303 ATAD2Q6PL18 1390 aa13.14□□□□□ -0.31
RPAP1-204ENST00000562303 NUDT16Q96DE0 195 aaKnown RBP13.14□□□□□ -0.31
RPAP1-204ENST00000562303 HSP90AB3PQ58FF7 597 aa13.14□□□□□ -0.31
RPAP1-204ENST00000562303 ANKRD30BQ9BXX2 1392 aa13.14□□□□□ -0.31
RPAP1-204ENST00000562303 FCHSD2O94868 740 aa13.14□□□□□ -0.31
RPAP1-204ENST00000562303 MPRIPQ6WCQ1 1025 aa13.14□□□□□ -0.31
RPAP1-204ENST00000562303 LARP1Q6PKG0 1096 aaKnown RBP13.14□□□□□ -0.31
RPAP1-204ENST00000562303 RPAP2Q8IXW5 612 aaPredicted RBP13.14□□□□□ -0.31
RPAP1-204ENST00000562303 DHX37Q8IY37 1157 aaKnown RBP13.14□□□□□ -0.31
RPAP1-204ENST00000562303 ERBINQ96RT1 1412 aa13.14□□□□□ -0.31
RPAP1-204ENST00000562303 SMARCA4P51532 1647 aa13.14□□□□□ -0.31
RPAP1-204ENST00000562303 TAF3Q5VWG9 929 aa13.13□□□□□ -0.31
RPAP1-204ENST00000562303 CTCFLQ8NI51 663 aaPredicted RBP13.13□□□□□ -0.31
RPAP1-204ENST00000562303 RANBP6O60518 1105 aaKnown RBP13.13□□□□□ -0.31
RPAP1-204ENST00000562303 NFE2L2Q16236 605 aa13.13□□□□□ -0.31
RPAP1-204ENST00000562303 FILIP1Q7Z7B0 1213 aa13.13□□□□□ -0.31
RPAP1-204ENST00000562303 MAP3K12Q12852 859 aa13.13□□□□□ -0.31
RPAP1-204ENST00000562303 ARHGAP29Q52LW3 1261 aa13.13□□□□□ -0.31
RPAP1-204ENST00000562303 TRMT112Q9UI30 125 aaKnown RBP13.13□□□□□ -0.31
RPAP1-204ENST00000562303 SLC5A1P13866 664 aa13.13□□□□□ -0.31
RPAP1-204ENST00000562303 LIG1P18858 919 aa13.13□□□□□ -0.31
RPAP1-204ENST00000562303 IFIT5Q13325 482 aaKnown RBP13.13□□□□□ -0.31
RPAP1-204ENST00000562303 CCDC150Q8NCX0 1101 aa13.13□□□□□ -0.31
RPAP1-204ENST00000562303 LRRC9Q6ZRR7 1453 aa13.12□□□□□ -0.31
RPAP1-204ENST00000562303 SLF2Q8IX21 1173 aa13.12□□□□□ -0.31
RPAP1-204ENST00000562303 EHMT1Q9H9B1 1298 aa13.12□□□□□ -0.31
RPAP1-204ENST00000562303 RPGRIP1LQ68CZ1 1315 aa13.12□□□□□ -0.31
RPAP1-204ENST00000562303 CFAP100Q494V2 611 aa13.12□□□□□ -0.31
RPAP1-204ENST00000562303 NGLY1Q96IV0 654 aa13.12□□□□□ -0.31
RPAP1-204ENST00000562303 EXOC6BQ9Y2D4 811 aa13.12□□□□□ -0.31
RPAP1-204ENST00000562303 FKBP15Q5T1M5 1219 aa13.12□□□□□ -0.31
RPAP1-204ENST00000562303 DUSP27Q5VZP5 1158 aa13.12□□□□□ -0.31
RPAP1-204ENST00000562303 KIF1BPQ96EK5 621 aa13.12□□□□□ -0.31
RPAP1-204ENST00000562303 SPA17Q15506 151 aa13.12□□□□□ -0.31
RPAP1-204ENST00000562303 PLEKHH2Q8IVE3 1493 aa13.11□□□□□ -0.31
RPAP1-204ENST00000562303 CCDC196A0A1B0GTZ2 297 aa13.11□□□□□ -0.31
RPAP1-204ENST00000562303 CCDC91Q7Z6B0 441 aa13.11□□□□□ -0.31
RPAP1-204ENST00000562303 CCDC148Q8NFR7 591 aa13.11□□□□□ -0.31
RPAP1-204ENST00000562303 TMEM266Q2M3C6 531 aa13.11□□□□□ -0.31
RPAP1-204ENST00000562303 MCM10Q7L590 875 aa13.11□□□□□ -0.31
RPAP1-204ENST00000562303 RAB34Q9BZG1 259 aa13.11□□□□□ -0.31
RPAP1-204ENST00000562303 GRIN2BQ13224 1484 aa13.11□□□□□ -0.31
RPAP1-204ENST00000562303 C9orf84Q5VXU9 1444 aa13.11□□□□□ -0.31
RPAP1-204ENST00000562303 C6orf229H3BNL8 230 aa13.11□□□□□ -0.31
RPAP1-204ENST00000562303 BOLA2Q9H3K6 86 aa13.11□□□□□ -0.31
RPAP1-204ENST00000562303 CACNA2D4Q7Z3S7 1137 aa13.11□□□□□ -0.31
RPAP1-204ENST00000562303 IQCA1Q86XH1 822 aa13.1□□□□□ -0.31
RPAP1-204ENST00000562303 USHBP1Q8N6Y0 703 aa13.1□□□□□ -0.31
RPAP1-204ENST00000562303 CASKIN1Q8WXD9 1431 aa13.1□□□□□ -0.31
RPAP1-204ENST00000562303 PRPF40BQ6NWY9 871 aaKnown RBP13.1□□□□□ -0.31
RPAP1-204ENST00000562303 FEZ1Q99689 392 aa13.1□□□□□ -0.31
RPAP1-204ENST00000562303 CCDC61Q9Y6R9 512 aa13.1□□□□□ -0.31
RPAP1-204ENST00000562303 RAB11FIP3O75154 756 aa13.1□□□□□ -0.31
RPAP1-204ENST00000562303 GLRX3O76003 335 aaKnown RBP13.1□□□□□ -0.31
RPAP1-204ENST00000562303 KLHL10Q6JEL2 608 aa13.1□□□□□ -0.31
RPAP1-204ENST00000562303 CCDC102AQ96A19 550 aa13.1□□□□□ -0.31
RPAP1-204ENST00000562303 ANKRD18BA2A2Z9 1011 aa13.1□□□□□ -0.31
RPAP1-204ENST00000562303 VPS36Q86VN1 386 aa13.1□□□□□ -0.31
RPAP1-204ENST00000562303 DRC1Q96MC2 740 aa13.1□□□□□ -0.31
RPAP1-204ENST00000562303 CCDC82Q8N4S0 544 aa13.09□□□□□ -0.31
RPAP1-204ENST00000562303 RBM10P98175 930 aaKnown RBP13.09□□□□□ -0.31
RPAP1-204ENST00000562303 CAMK4Q16566 473 aa13.09□□□□□ -0.31
RPAP1-204ENST00000562303 CCDC83Q8IWF9 413 aa13.09□□□□□ -0.31
RPAP1-204ENST00000562303 PHAXQ9H814 394 aaKnown RBP13.09□□□□□ -0.31
RPAP1-204ENST00000562303 SLC12A7Q9Y666 1083 aa13.09□□□□□ -0.31
RPAP1-204ENST00000562303 PDIA4P13667 645 aaKnown RBP13.09□□□□□ -0.31
RPAP1-204ENST00000562303 AMOTQ4VCS5 1084 aa13.09□□□□□ -0.31
RPAP1-204ENST00000562303 FERMT3Q86UX7 667 aa13.09□□□□□ -0.31
RPAP1-204ENST00000562303 MX1P20591 662 aa13.08□□□□□ -0.31
RPAP1-204ENST00000562303 MAP3K11Q16584 847 aa13.08□□□□□ -0.31
RPAP1-204ENST00000562303 CTNNBL1Q8WYA6 563 aaPredicted RBP13.08□□□□□ -0.32
RPAP1-204ENST00000562303 CCDC194A0A1B0GVG4 234 aa13.08□□□□□ -0.32
RPAP1-204ENST00000562303 CCDC113Q9H0I3 377 aa13.08□□□□□ -0.32
RPAP1-204ENST00000562303 NLRP5P59047 1200 aa13.08□□□□□ -0.32
RPAP1-204ENST00000562303 TMEM57Q8N5G2 664 aa13.08□□□□□ -0.32
RPAP1-204ENST00000562303 EXOC5O00471 708 aa13.08□□□□□ -0.32
RPAP1-204ENST00000562303 BAG4O95429 457 aaKnown RBP13.08□□□□□ -0.32
RPAP1-204ENST00000562303 TMPOP42166 694 aaKnown RBP13.08□□□□□ -0.32
RPAP1-204ENST00000562303 TAF7Q15545 349 aaPredicted RBP13.08□□□□□ -0.32
RPAP1-204ENST00000562303 RNF41Q9H4P4 317 aaPredicted RBP13.08□□□□□ -0.32
RPAP1-204ENST00000562303 ZNF213O14771 459 aa13.07□□□□□ -0.32
RPAP1-204ENST00000562303 TRMT1LQ7Z2T5 733 aaKnown RBP13.07□□□□□ -0.32
RPAP1-204ENST00000562303 DYDC1Q8WWB3 177 aa13.07□□□□□ -0.32
RPAP1-204ENST00000562303 FERMT2Q96AC1 680 aa13.07□□□□□ -0.32
RPAP1-204ENST00000562303 KIAA1107Q9UPP5 1409 aa13.07□□□□□ -0.32
RPAP1-204ENST00000562303 GSTTP1A0A1W2PQM5 241 aa13.07□□□□□ -0.32
RPAP1-204ENST00000562303 MACROD2A1Z1Q3 448 aa13.07□□□□□ -0.32
RPAP1-204ENST00000562303 FGFR1OPO95684 399 aaKnown RBP13.07□□□□□ -0.32
RPAP1-204ENST00000562303 C8orf76Q96K31 380 aa13.07□□□□□ -0.32
RPAP1-204ENST00000562303 THUMPD2Q9BTF0 503 aaKnown RBP13.07□□□□□ -0.32
RPAP1-204ENST00000562303 COMMD10Q9Y6G5 202 aa13.07□□□□□ -0.32
RPAP1-204ENST00000562303 SSRP1Q08945 709 aaKnown RBP13.07□□□□□ -0.32
RPAP1-204ENST00000562303 CCDC178Q5BJE1 867 aa13.07□□□□□ -0.32
RPAP1-204ENST00000562303 KIF20AO95235 890 aa13.06□□□□□ -0.32
RPAP1-204ENST00000562303 GPTP24298 496 aa13.06□□□□□ -0.32
RPAP1-204ENST00000562303 SMARCA5O60264 1052 aaPredicted RBP13.06□□□□□ -0.32
RPAP1-204ENST00000562303 WAPLQ7Z5K2 1190 aa13.06□□□□□ -0.32
RPAP1-204ENST00000562303 CCDC8Q9H0W5 538 aaPredicted RBP13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms