RNA–Protein interactions for RNA: ENST00000560801.5

TRPM1-212, Transcript of transient receptor potential cation channel subfamily M member 1, humanhuman

TSL 1 (best)

Gene TRPM1, Length 4,454 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM1-212ENST00000560801 RNMTO43148 476 aaKnown RBP11.87□□□□□ -0.51
TRPM1-212ENST00000560801 SURF6O75683 361 aaKnown RBP11.87□□□□□ -0.51
TRPM1-212ENST00000560801 SIK1P57059 783 aa11.87□□□□□ -0.51
TRPM1-212ENST00000560801 CCDC152Q4G0S7 254 aa11.87□□□□□ -0.51
TRPM1-212ENST00000560801 SIL1Q9H173 461 aa11.87□□□□□ -0.51
TRPM1-212ENST00000560801 PLA2R1Q13018 1463 aa11.87□□□□□ -0.51
TRPM1-212ENST00000560801 SLC4A3P48751 1232 aa11.87□□□□□ -0.51
TRPM1-212ENST00000560801 NSFL1CQ9UNZ2 370 aaKnown RBP11.87□□□□□ -0.51
TRPM1-212ENST00000560801 MTHFSDQ2M296 383 aaKnown RBP11.86□□□□□ -0.51
TRPM1-212ENST00000560801 EYA3Q99504 573 aa11.86□□□□□ -0.51
TRPM1-212ENST00000560801 ERVV-2B6SEH9 535 aa11.86□□□□□ -0.51
TRPM1-212ENST00000560801 PIP4K2AP48426 406 aaPredicted RBP11.86□□□□□ -0.51
TRPM1-212ENST00000560801 GNL2Q13823 731 aaKnown RBP11.86□□□□□ -0.51
TRPM1-212ENST00000560801 ANKRD13DQ6ZTN6 518 aa11.86□□□□□ -0.51
TRPM1-212ENST00000560801 DNAJC10Q8IXB1 793 aa11.86□□□□□ -0.51
TRPM1-212ENST00000560801 CWC25Q9NXE8 425 aaPredicted RBP11.86□□□□□ -0.51
TRPM1-212ENST00000560801 ZNF408Q9H9D4 720 aa11.86□□□□□ -0.51
TRPM1-212ENST00000560801 DDX19BQ9UMR2 479 aa11.86□□□□□ -0.51
TRPM1-212ENST00000560801 ZMYM4Q5VZL5 1548 aa11.86□□□□□ -0.51
TRPM1-212ENST00000560801 EAPPQ56P03 285 aaPredicted RBP11.86□□□□□ -0.51
TRPM1-212ENST00000560801 TTC39AQ5SRH9 613 aa11.86□□□□□ -0.51
TRPM1-212ENST00000560801 CLASRPQ8N2M8 674 aaKnown RBP11.86□□□□□ -0.51
TRPM1-212ENST00000560801 LARGE2Q8N3Y3 721 aa11.86□□□□□ -0.51
TRPM1-212ENST00000560801 PRR36Q9H6K5 1346 aa11.85□□□□□ -0.51
TRPM1-212ENST00000560801 ANKARQ7Z5J8 1434 aa11.85□□□□□ -0.51
TRPM1-212ENST00000560801 ADGRB3O60242 1522 aa11.85□□□□□ -0.51
TRPM1-212ENST00000560801 CPS1P31327 1500 aa11.85□□□□□ -0.51
TRPM1-212ENST00000560801 RBM17Q96I25 401 aaKnown RBP11.85□□□□□ -0.51
TRPM1-212ENST00000560801 TXNRD1Q16881 649 aa11.85□□□□□ -0.51
TRPM1-212ENST00000560801 ANKRD18AQ8IVF6 992 aa11.85□□□□□ -0.51
TRPM1-212ENST00000560801 ABCF2Q9UG63 623 aa11.85□□□□□ -0.51
TRPM1-212ENST00000560801 CLSTN1O94985 981 aa11.85□□□□□ -0.51
TRPM1-212ENST00000560801 PDE6BP35913 854 aa11.85□□□□□ -0.51
TRPM1-212ENST00000560801 CCT4P50991 539 aaKnown RBP11.85□□□□□ -0.51
TRPM1-212ENST00000560801 RILPL2Q969X0 211 aa11.85□□□□□ -0.51
TRPM1-212ENST00000560801 RAI14Q9P0K7 980 aa11.84□□□□□ -0.51
TRPM1-212ENST00000560801 TCEAL9Q9UHQ7 104 aa11.84□□□□□ -0.51
TRPM1-212ENST00000560801 EIF2AK4Q9P2K8 1649 aaKnown RBP11.84□□□□□ -0.51
TRPM1-212ENST00000560801 ABCA6Q8N139 1617 aa11.84□□□□□ -0.51
TRPM1-212ENST00000560801 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.84□□□□□ -0.51
TRPM1-212ENST00000560801 ATP2B2Q01814 1243 aa11.84□□□□□ -0.51
TRPM1-212ENST00000560801 HTATSF1O43719 755 aaKnown RBP11.84□□□□□ -0.51
TRPM1-212ENST00000560801 ANXA1P04083 346 aa11.84□□□□□ -0.51
TRPM1-212ENST00000560801 KCNQ4P56696 695 aa11.84□□□□□ -0.51
TRPM1-212ENST00000560801 COPS6Q7L5N1 327 aa11.84□□□□□ -0.51
TRPM1-212ENST00000560801 MARCH6O60337 910 aa11.84□□□□□ -0.51
TRPM1-212ENST00000560801 FER1L4A9Z1Z3 1794 aa11.83□□□□□ -0.52
TRPM1-212ENST00000560801 ANP32AP39687 249 aaKnown RBP11.83□□□□□ -0.52
TRPM1-212ENST00000560801 XAGE3Q8WTP9 111 aa11.83□□□□□ -0.52
TRPM1-212ENST00000560801 DIAPH3Q9NSV4 1193 aa11.83□□□□□ -0.52
TRPM1-212ENST00000560801 IFT57Q9NWB7 429 aa11.83□□□□□ -0.52
TRPM1-212ENST00000560801 LRP2BPQ9P2M1 347 aa11.83□□□□□ -0.52
TRPM1-212ENST00000560801 PLXNC1O60486 1568 aa11.83□□□□□ -0.52
TRPM1-212ENST00000560801 ERBB3P21860 1342 aa11.83□□□□□ -0.52
TRPM1-212ENST00000560801 C2CD5Q86YS7 1000 aa11.83□□□□□ -0.52
TRPM1-212ENST00000560801 TESK2Q96S53 571 aa11.82□□□□□ -0.52
TRPM1-212ENST00000560801 COG6Q9Y2V7 657 aa11.82□□□□□ -0.52
TRPM1-212ENST00000560801 RALGAPBQ86X10 1494 aa11.82□□□□□ -0.52
TRPM1-212ENST00000560801 WDR63Q8IWG1 891 aa11.82□□□□□ -0.52
TRPM1-212ENST00000560801 GNAI2P04899 355 aa11.82□□□□□ -0.52
TRPM1-212ENST00000560801 ANKRD45Q5TZF3 282 aa11.82□□□□□ -0.52
TRPM1-212ENST00000560801 ZNF790Q6PG37 636 aa11.82□□□□□ -0.52
TRPM1-212ENST00000560801 ERC2O15083 957 aa11.82□□□□□ -0.52
TRPM1-212ENST00000560801 CDK11BP21127 795 aaKnown RBP11.82□□□□□ -0.52
TRPM1-212ENST00000560801 TRDNQ13061 729 aa11.82□□□□□ -0.52
TRPM1-212ENST00000560801 LDHAL6AQ6ZMR3 332 aa11.82□□□□□ -0.52
TRPM1-212ENST00000560801 SYNE3Q6ZMZ3 975 aa11.82□□□□□ -0.52
TRPM1-212ENST00000560801 CNKSR1Q969H4 720 aa11.82□□□□□ -0.52
TRPM1-212ENST00000560801 SLC52A2Q9HAB3 445 aa11.82□□□□□ -0.52
TRPM1-212ENST00000560801 MAP3K5Q99683 1374 aa11.81□□□□□ -0.52
TRPM1-212ENST00000560801 ALDH1B1P30837 517 aa11.81□□□□□ -0.52
TRPM1-212ENST00000560801 DNAAF4Q8WXU2 420 aa11.81□□□□□ -0.52
TRPM1-212ENST00000560801 SPINK5Q9NQ38 1064 aaPredicted RBP11.81□□□□□ -0.52
TRPM1-212ENST00000560801 SLC3A2P08195 630 aaKnown RBP11.81□□□□□ -0.52
TRPM1-212ENST00000560801 ERC1Q8IUD2 1116 aa11.81□□□□□ -0.52
TRPM1-212ENST00000560801 SLF2Q8IX21 1173 aa11.81□□□□□ -0.52
TRPM1-212ENST00000560801 ZFYVE9O95405 1425 aa11.81□□□□□ -0.52
TRPM1-212ENST00000560801 PARP10Q53GL7 1025 aa11.81□□□□□ -0.52
TRPM1-212ENST00000560801 DZIP1Q86YF9 867 aaKnown RBP11.81□□□□□ -0.52
TRPM1-212ENST00000560801 NIM1KQ8IY84 436 aa11.81□□□□□ -0.52
TRPM1-212ENST00000560801 CCDC24Q8N4L8 307 aa11.81□□□□□ -0.52
TRPM1-212ENST00000560801 CRACR2BQ8N4Y2 399 aaPredicted RBP11.81□□□□□ -0.52
TRPM1-212ENST00000560801 SUPT20HQ8NEM7 779 aa11.81□□□□□ -0.52
TRPM1-212ENST00000560801 PHKG2P15735 406 aa11.8□□□□□ -0.52
TRPM1-212ENST00000560801 UBE3BQ7Z3V4 1068 aa11.8□□□□□ -0.52
TRPM1-212ENST00000560801 DNAJC2Q99543 621 aaKnown RBP11.8□□□□□ -0.52
TRPM1-212ENST00000560801 CDC42BPBQ9Y5S2 1711 aa11.8□□□□□ -0.52
TRPM1-212ENST00000560801 NCOA3Q9Y6Q9 1424 aa11.8□□□□□ -0.52
TRPM1-212ENST00000560801 RIMBP2O15034 1052 aa11.8□□□□□ -0.52
TRPM1-212ENST00000560801 WDR78Q5VTH9 848 aa11.8□□□□□ -0.52
TRPM1-212ENST00000560801 MTMR7Q9Y216 660 aa11.8□□□□□ -0.52
TRPM1-212ENST00000560801 SOS2Q07890 1332 aaPredicted RBP11.8□□□□□ -0.52
TRPM1-212ENST00000560801 NKTRP30414 1462 aaKnown RBP11.8□□□□□ -0.52
TRPM1-212ENST00000560801 GRIN3BO60391 1043 aa11.8□□□□□ -0.52
TRPM1-212ENST00000560801 TET3O43151 1660 aa11.8□□□□□ -0.52
TRPM1-212ENST00000560801 SOGA3Q5TF21 947 aa11.8□□□□□ -0.52
TRPM1-212ENST00000560801 SLC5A1P13866 664 aa11.79□□□□□ -0.52
TRPM1-212ENST00000560801 AKAP17AQ02040 695 aaKnown RBP11.79□□□□□ -0.52
TRPM1-212ENST00000560801 SLC27A3Q5K4L6 730 aa11.79□□□□□ -0.52
TRPM1-212ENST00000560801 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms