RNA–Protein interactions for RNA: ENST00000560448.5

PKNOX1-209, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 5

Gene PKNOX1, Length 1,429 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-209ENST00000560448 ZNF831Q5JPB2 1677 aa18.46■□□□□ 0.55
PKNOX1-209ENST00000560448 TEFQ10587 303 aa18.46■□□□□ 0.55
PKNOX1-209ENST00000560448 PROM2Q8N271 834 aa18.46■□□□□ 0.55
PKNOX1-209ENST00000560448 NFATC2IPQ8NCF5 419 aa18.45■□□□□ 0.54
PKNOX1-209ENST00000560448 PNISRQ8TF01 805 aaKnown RBP18.44■□□□□ 0.54
PKNOX1-209ENST00000560448 LGR6Q9HBX8 967 aa18.44■□□□□ 0.54
PKNOX1-209ENST00000560448 CCNL1Q9UK58 526 aaPredicted RBP18.44■□□□□ 0.54
PKNOX1-209ENST00000560448 IL17REQ8NFR9 667 aa18.43■□□□□ 0.54
PKNOX1-209ENST00000560448 ATG3Q9NT62 314 aa18.43■□□□□ 0.54
PKNOX1-209ENST00000560448 PAPPAQ13219 1627 aa18.42■□□□□ 0.54
PKNOX1-209ENST00000560448 LOC102724428A0A0B4J2F2 783 aa18.41■□□□□ 0.54
PKNOX1-209ENST00000560448 CCER2I3L3R5 266 aa18.41■□□□□ 0.54
PKNOX1-209ENST00000560448 TMPOP42166 694 aaKnown RBP18.41■□□□□ 0.54
PKNOX1-209ENST00000560448 SIK1P57059 783 aa18.41■□□□□ 0.54
PKNOX1-209ENST00000560448 NCBP3Q53F19 620 aaKnown RBP18.41■□□□□ 0.54
PKNOX1-209ENST00000560448 ASAP1Q9ULH1 1129 aa18.41■□□□□ 0.54
PKNOX1-209ENST00000560448 DLG5Q8TDM6 1919 aa18.41■□□□□ 0.54
PKNOX1-209ENST00000560448 CICQ96RK0 1608 aaPredicted RBP18.41■□□□□ 0.54
PKNOX1-209ENST00000560448 SIPA1L3O60292 1781 aaPredicted RBP18.41■□□□□ 0.54
PKNOX1-209ENST00000560448 STK32BQ9NY57 414 aa18.4■□□□□ 0.54
PKNOX1-209ENST00000560448 RIPK4P57078 832 aa18.39■□□□□ 0.53
PKNOX1-209ENST00000560448 CCDC184Q52MB2 194 aa18.39■□□□□ 0.53
PKNOX1-209ENST00000560448 TTC5Q8N0Z6 440 aa18.39■□□□□ 0.53
PKNOX1-209ENST00000560448 LRRC4BQ9NT99 713 aa18.39■□□□□ 0.53
PKNOX1-209ENST00000560448 C5P01031 1676 aa18.38■□□□□ 0.53
PKNOX1-209ENST00000560448 SLC15A2Q16348 729 aa18.38■□□□□ 0.53
PKNOX1-209ENST00000560448 VSIG10Q8N0Z9 540 aa18.38■□□□□ 0.53
PKNOX1-209ENST00000560448 BABAM1Q9NWV8 329 aa18.38■□□□□ 0.53
PKNOX1-209ENST00000560448 TAF1LQ8IZX4 1826 aa18.37■□□□□ 0.53
PKNOX1-209ENST00000560448 ATP6V1AP38606 617 aa18.37■□□□□ 0.53
PKNOX1-209ENST00000560448 MCM10Q7L590 875 aa18.37■□□□□ 0.53
PKNOX1-209ENST00000560448 CCDC146Q8IYE0 955 aa18.37■□□□□ 0.53
PKNOX1-209ENST00000560448 NGEFQ8N5V2 710 aa18.37■□□□□ 0.53
PKNOX1-209ENST00000560448 QSER1Q2KHR3 1735 aa18.37■□□□□ 0.53
PKNOX1-209ENST00000560448 UBR2Q8IWV8 1755 aa18.36■□□□□ 0.53
PKNOX1-209ENST00000560448 TAF7Q15545 349 aaPredicted RBP18.36■□□□□ 0.53
PKNOX1-209ENST00000560448 ZNF790Q6PG37 636 aa18.36■□□□□ 0.53
PKNOX1-209ENST00000560448 BTBD11A6QL63 1104 aa18.35■□□□□ 0.53
PKNOX1-209ENST00000560448 CALD1Q05682 793 aaKnown RBP18.35■□□□□ 0.53
PKNOX1-209ENST00000560448 AKT1S1Q96B36 256 aa18.35■□□□□ 0.53
PKNOX1-209ENST00000560448 FLAD1Q8NFF5 587 aa18.34■□□□□ 0.53
PKNOX1-209ENST00000560448 RBM42Q9BTD8 480 aaKnown RBP18.34■□□□□ 0.53
PKNOX1-209ENST00000560448 TEX13AQ9BXU3 409 aaPredicted RBP18.34■□□□□ 0.53
PKNOX1-209ENST00000560448 ANO8Q9HCE9 1232 aaPredicted RBP18.34■□□□□ 0.53
PKNOX1-209ENST00000560448 KCPQ6ZWJ8 1503 aa18.33■□□□□ 0.53
PKNOX1-209ENST00000560448 C4BP0C0L5 1744 aa18.33■□□□□ 0.53
PKNOX1-209ENST00000560448 DCTN1Q14203 1278 aa18.32■□□□□ 0.52
PKNOX1-209ENST00000560448 R3HDM1Q15032 1099 aaKnown RBP18.32■□□□□ 0.52
PKNOX1-209ENST00000560448 CCDC27Q2M243 656 aa18.32■□□□□ 0.52
PKNOX1-209ENST00000560448 RC3H1Q5TC82 1133 aaKnown RBP18.32■□□□□ 0.52
PKNOX1-209ENST00000560448 FMNL2Q96PY5 1086 aa18.32■□□□□ 0.52
PKNOX1-209ENST00000560448 CNTNAP4Q9C0A0 1308 aa18.32■□□□□ 0.52
PKNOX1-209ENST00000560448 COL5A3P25940 1745 aaPredicted RBP18.32■□□□□ 0.52
PKNOX1-209ENST00000560448 APAF1O14727 1248 aa18.32■□□□□ 0.52
PKNOX1-209ENST00000560448 PTCD1O75127 700 aaKnown RBP18.32■□□□□ 0.52
PKNOX1-209ENST00000560448 AK7Q96M32 723 aa18.32■□□□□ 0.52
PKNOX1-209ENST00000560448 CENPBP07199 599 aaPredicted RBP18.31■□□□□ 0.52
PKNOX1-209ENST00000560448 SLC39A6Q13433 755 aa18.31■□□□□ 0.52
PKNOX1-209ENST00000560448 TFCP2L1Q9NZI6 479 aa18.31■□□□□ 0.52
PKNOX1-209ENST00000560448 HEG1Q9ULI3 1381 aa18.3■□□□□ 0.52
PKNOX1-209ENST00000560448 SSFA2P28290 1259 aa18.3■□□□□ 0.52
PKNOX1-209ENST00000560448 ITPK1Q13572 414 aa18.3■□□□□ 0.52
PKNOX1-209ENST00000560448 SLC16A10Q8TF71 515 aa18.3■□□□□ 0.52
PKNOX1-209ENST00000560448 YTHDC1Q96MU7 727 aaKnown RBP18.3■□□□□ 0.52
PKNOX1-209ENST00000560448 SLC4A9Q96Q91 983 aa18.3■□□□□ 0.52
PKNOX1-209ENST00000560448 TRIM35Q9UPQ4 493 aa18.3■□□□□ 0.52
PKNOX1-209ENST00000560448 NEUROD2Q15784 382 aa18.29■□□□□ 0.52
PKNOX1-209ENST00000560448 ZNF827Q17R98 1081 aa18.29■□□□□ 0.52
PKNOX1-209ENST00000560448 RRP7AQ9Y3A4 280 aaKnown RBP18.29■□□□□ 0.52
PKNOX1-209ENST00000560448 KDM3BQ7LBC6 1761 aa18.28■□□□□ 0.52
PKNOX1-209ENST00000560448 PSDA5PKW4 1024 aaPredicted RBP18.28■□□□□ 0.52
PKNOX1-209ENST00000560448 STARD3NLO95772 234 aa18.28■□□□□ 0.52
PKNOX1-209ENST00000560448 ADRA2BP18089 450 aa18.28■□□□□ 0.52
PKNOX1-209ENST00000560448 KCNQ4P56696 695 aa18.28■□□□□ 0.52
PKNOX1-209ENST00000560448 FAM9BQ8IZU0 186 aa18.28■□□□□ 0.52
PKNOX1-209ENST00000560448 LINC00116Q8NCU8 138 aa18.28■□□□□ 0.52
PKNOX1-209ENST00000560448 ZNF496Q96IT1 587 aaPredicted RBP18.28■□□□□ 0.52
PKNOX1-209ENST00000560448 TJP1Q07157 1748 aa18.28■□□□□ 0.52
PKNOX1-209ENST00000560448 CASZ1Q86V15 1759 aa18.28■□□□□ 0.52
PKNOX1-209ENST00000560448 SNRPA1P09661 255 aaKnown RBP18.26■□□□□ 0.51
PKNOX1-209ENST00000560448 RTCBQ9Y3I0 505 aaKnown RBP18.26■□□□□ 0.51
PKNOX1-209ENST00000560448 UBR3Q6ZT12 1888 aa18.26■□□□□ 0.51
PKNOX1-209ENST00000560448 PNPLA7Q6ZV29 1317 aa18.25■□□□□ 0.51
PKNOX1-209ENST00000560448 CFAP44Q96MT7 982 aa18.25■□□□□ 0.51
PKNOX1-209ENST00000560448 THUMPD2Q9BTF0 503 aaKnown RBP18.25■□□□□ 0.51
PKNOX1-209ENST00000560448 TSPYL4Q9UJ04 414 aa18.25■□□□□ 0.51
PKNOX1-209ENST00000560448 RPS6KA4O75676 772 aa18.24■□□□□ 0.51
PKNOX1-209ENST00000560448 TUBGCP6Q96RT7 1819 aa18.24■□□□□ 0.51
PKNOX1-209ENST00000560448 LRP5O75197 1615 aa18.24■□□□□ 0.51
PKNOX1-209ENST00000560448 CHL1O00533 1208 aa18.23■□□□□ 0.51
PKNOX1-209ENST00000560448 GNPATO15228 680 aa18.23■□□□□ 0.51
PKNOX1-209ENST00000560448 CYP19A1P11511 503 aaPredicted RBP18.23■□□□□ 0.51
PKNOX1-209ENST00000560448 CRKLP46109 303 aaKnown RBP18.23■□□□□ 0.51
PKNOX1-209ENST00000560448 GNAI1P63096 354 aa18.23■□□□□ 0.51
PKNOX1-209ENST00000560448 DNAJC10Q8IXB1 793 aa18.23■□□□□ 0.51
PKNOX1-209ENST00000560448 MTFR1LQ9H019 292 aa18.23■□□□□ 0.51
PKNOX1-209ENST00000560448 CCDC87Q9NVE4 849 aa18.23■□□□□ 0.51
PKNOX1-209ENST00000560448 IFT57Q9NWB7 429 aa18.23■□□□□ 0.51
PKNOX1-209ENST00000560448 IL16Q14005 1332 aa18.23■□□□□ 0.51
PKNOX1-209ENST00000560448 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms