RNA–Protein interactions for RNA: ENST00000560447.1

RTF1-206, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 3

Gene RTF1, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-206ENST00000560447 NCAPD2Q15021 1401 aa12.2□□□□□ -0.46
RTF1-206ENST00000560447 NCOA3Q9Y6Q9 1424 aa12.2□□□□□ -0.46
RTF1-206ENST00000560447 MED1Q15648 1581 aaPredicted RBP12.19□□□□□ -0.46
RTF1-206ENST00000560447 FAM83GA6ND36 823 aa12.19□□□□□ -0.46
RTF1-206ENST00000560447 TBC1D32Q96NH3 1257 aa12.19□□□□□ -0.46
RTF1-206ENST00000560447 PXDNLA1KZ92 1463 aa12.19□□□□□ -0.46
RTF1-206ENST00000560447 OVOS2A0A0G2JMS6 1433 aa12.19□□□□□ -0.46
RTF1-206ENST00000560447 RGS12O14924 1447 aa12.19□□□□□ -0.46
RTF1-206ENST00000560447 PLEKHG2Q9H7P9 1386 aa12.18□□□□□ -0.46
RTF1-206ENST00000560447 POTEB2H3BUK9 544 aa12.18□□□□□ -0.46
RTF1-206ENST00000560447 MTHFSDQ2M296 383 aaKnown RBP12.18□□□□□ -0.46
RTF1-206ENST00000560447 CHD1LQ86WJ1 897 aa12.18□□□□□ -0.46
RTF1-206ENST00000560447 RPAP2Q8IXW5 612 aaPredicted RBP12.18□□□□□ -0.46
RTF1-206ENST00000560447 ABTB2Q8N961 1025 aa12.18□□□□□ -0.46
RTF1-206ENST00000560447 IP6K1Q92551 441 aa12.18□□□□□ -0.46
RTF1-206ENST00000560447 BMP2KQ9NSY1 1161 aaPredicted RBP12.18□□□□□ -0.46
RTF1-206ENST00000560447 MAP3K5Q99683 1374 aa12.18□□□□□ -0.46
RTF1-206ENST00000560447 GNAT3A8MTJ3 354 aa12.17□□□□□ -0.46
RTF1-206ENST00000560447 TIE1P35590 1138 aa12.17□□□□□ -0.46
RTF1-206ENST00000560447 ATN1P54259 1190 aaPredicted RBP12.17□□□□□ -0.46
RTF1-206ENST00000560447 BMP2KLQ5H9B9 411 aa12.17□□□□□ -0.46
RTF1-206ENST00000560447 DCCP43146 1447 aa12.17□□□□□ -0.46
RTF1-206ENST00000560447 KDM3BQ7LBC6 1761 aa12.17□□□□□ -0.46
RTF1-206ENST00000560447 ABCC6O95255 1503 aa12.16□□□□□ -0.46
RTF1-206ENST00000560447 DCTN1Q14203 1278 aa12.16□□□□□ -0.46
RTF1-206ENST00000560447 CCT4P50991 539 aaKnown RBP12.15□□□□□ -0.46
RTF1-206ENST00000560447 MCM10Q7L590 875 aa12.15□□□□□ -0.46
RTF1-206ENST00000560447 TSPYL4Q9UJ04 414 aa12.15□□□□□ -0.46
RTF1-206ENST00000560447 ALS2Q96Q42 1657 aa12.15□□□□□ -0.46
RTF1-206ENST00000560447 ATP10DQ9P241 1426 aa12.14□□□□□ -0.47
RTF1-206ENST00000560447 HOXB7P09629 217 aa12.14□□□□□ -0.47
RTF1-206ENST00000560447 ANKRD44Q8N8A2 993 aa12.14□□□□□ -0.47
RTF1-206ENST00000560447 SLC39A7Q92504 469 aa12.14□□□□□ -0.47
RTF1-206ENST00000560447 DCTPP1Q9H773 170 aa12.14□□□□□ -0.47
RTF1-206ENST00000560447 PCDHB13Q9Y5F0 798 aa12.14□□□□□ -0.47
RTF1-206ENST00000560447 MSH6P52701 1360 aa12.14□□□□□ -0.47
RTF1-206ENST00000560447 CEMIPQ8WUJ3 1361 aa12.14□□□□□ -0.47
RTF1-206ENST00000560447 ADAMTS7Q9UKP4 1686 aa12.13□□□□□ -0.47
RTF1-206ENST00000560447 ELL2O00472 640 aaPredicted RBP12.13□□□□□ -0.47
RTF1-206ENST00000560447 C7P10643 843 aa12.13□□□□□ -0.47
RTF1-206ENST00000560447 CCDC30Q5VVM6 783 aa12.13□□□□□ -0.47
RTF1-206ENST00000560447 STK31Q9BXU1 1019 aa12.13□□□□□ -0.47
RTF1-206ENST00000560447 METRNQ9UJH8 293 aa12.13□□□□□ -0.47
RTF1-206ENST00000560447 HMMRO75330 724 aa12.12□□□□□ -0.47
RTF1-206ENST00000560447 PSME1Q06323 249 aa12.12□□□□□ -0.47
RTF1-206ENST00000560447 TAF7Q15545 349 aaPredicted RBP12.12□□□□□ -0.47
RTF1-206ENST00000560447 SOX12O15370 315 aa12.11□□□□□ -0.47
RTF1-206ENST00000560447 SEC24BO95487 1268 aa12.11□□□□□ -0.47
RTF1-206ENST00000560447 AMOTQ4VCS5 1084 aa12.11□□□□□ -0.47
RTF1-206ENST00000560447 IFNL1Q8IU54 200 aa12.11□□□□□ -0.47
RTF1-206ENST00000560447 SIRT2Q8IXJ6 389 aa12.11□□□□□ -0.47
RTF1-206ENST00000560447 SIPA1L3O60292 1781 aaPredicted RBP12.1□□□□□ -0.47
RTF1-206ENST00000560447 RGPD2P0DJD1 1756 aa12.1□□□□□ -0.47
RTF1-206ENST00000560447 C1orf167Q5SNV9 1468 aa12.1□□□□□ -0.47
RTF1-206ENST00000560447 TTLL13PA6NNM8 815 aa12.1□□□□□ -0.47
RTF1-206ENST00000560447 RBM25P49756 843 aaKnown RBP12.1□□□□□ -0.47
RTF1-206ENST00000560447 ESCO1Q5FWF5 840 aa12.1□□□□□ -0.47
RTF1-206ENST00000560447 DCAF8Q5TAQ9 597 aa12.1□□□□□ -0.47
RTF1-206ENST00000560447 ANKRD45Q5TZF3 282 aa12.1□□□□□ -0.47
RTF1-206ENST00000560447 IFNLR1Q8IU57 520 aaPredicted RBP12.1□□□□□ -0.47
RTF1-206ENST00000560447 KLHL34Q8N239 644 aa12.1□□□□□ -0.47
RTF1-206ENST00000560447 C22orf23Q9BZE7 217 aa12.1□□□□□ -0.47
RTF1-206ENST00000560447 LNPKQ9C0E8 428 aa12.1□□□□□ -0.47
RTF1-206ENST00000560447 GNAI3P08754 354 aa12.09□□□□□ -0.47
RTF1-206ENST00000560447 NBR1Q14596 966 aa12.09□□□□□ -0.47
RTF1-206ENST00000560447 FOXO3O43524 673 aa12.08□□□□□ -0.48
RTF1-206ENST00000560447 PLEKHO1Q53GL0 409 aaPredicted RBP12.08□□□□□ -0.48
RTF1-206ENST00000560447 AKAP4Q5JQC9 854 aa12.08□□□□□ -0.48
RTF1-206ENST00000560447 CEP85Q6P2H3 762 aa12.08□□□□□ -0.48
RTF1-206ENST00000560447 ARHGEF25Q86VW2 580 aa12.08□□□□□ -0.48
RTF1-206ENST00000560447 OTUD5Q96G74 571 aa12.08□□□□□ -0.48
RTF1-206ENST00000560447 C19orf44Q9H6X5 657 aa12.08□□□□□ -0.48
RTF1-206ENST00000560447 CRYBG1Q9Y4K1 1723 aa12.08□□□□□ -0.48
RTF1-206ENST00000560447 IL17REQ8NFR9 667 aa12.07□□□□□ -0.48
RTF1-206ENST00000560447 SNX21Q969T3 373 aa12.07□□□□□ -0.48
RTF1-206ENST00000560447 IBTKQ9P2D0 1353 aaPredicted RBP12.06□□□□□ -0.48
RTF1-206ENST00000560447 POTEFA5A3E0 1075 aa12.06□□□□□ -0.48
RTF1-206ENST00000560447 CDC45O75419 566 aa12.06□□□□□ -0.48
RTF1-206ENST00000560447 FLIIQ13045 1269 aa12.06□□□□□ -0.48
RTF1-206ENST00000560447 NFKBIBQ15653 356 aa12.06□□□□□ -0.48
RTF1-206ENST00000560447 KRT24Q2M2I5 525 aa12.06□□□□□ -0.48
RTF1-206ENST00000560447 C14orf37Q86TY3 774 aa12.06□□□□□ -0.48
RTF1-206ENST00000560447 PROSER2Q86WR7 435 aaPredicted RBP12.06□□□□□ -0.48
RTF1-206ENST00000560447 C1orf115Q9H7X2 142 aa12.06□□□□□ -0.48
RTF1-206ENST00000560447 TUBGCP6Q96RT7 1819 aa12.06□□□□□ -0.48
RTF1-206ENST00000560447 GCP02774 474 aa12.05□□□□□ -0.48
RTF1-206ENST00000560447 GNAI2P04899 355 aa12.05□□□□□ -0.48
RTF1-206ENST00000560447 POTEJP0CG39 1038 aa12.05□□□□□ -0.48
RTF1-206ENST00000560447 PYGBP11216 843 aa12.05□□□□□ -0.48
RTF1-206ENST00000560447 DEKP35659 375 aaKnown RBP12.05□□□□□ -0.48
RTF1-206ENST00000560447 OSBPL3Q9H4L5 887 aa12.05□□□□□ -0.48
RTF1-206ENST00000560447 COL18A1P39060 1754 aa12.05□□□□□ -0.48
RTF1-206ENST00000560447 SCN11AQ9UI33 1791 aa12.05□□□□□ -0.48
RTF1-206ENST00000560447 MFAP1P55081 439 aaKnown RBP12.04□□□□□ -0.48
RTF1-206ENST00000560447 GSE1Q14687 1217 aa12.04□□□□□ -0.48
RTF1-206ENST00000560447 TTC22Q5TAA0 569 aa12.04□□□□□ -0.48
RTF1-206ENST00000560447 NBPF6Q5VWK0 638 aa12.04□□□□□ -0.48
RTF1-206ENST00000560447 NUTM2GQ5VZR2 741 aa12.04□□□□□ -0.48
RTF1-206ENST00000560447 KRT28Q7Z3Y7 464 aa12.04□□□□□ -0.48
RTF1-206ENST00000560447 PLEKHM2Q8IWE5 1019 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms