RNA–Protein interactions for RNA: ENST00000559327.1

IGDCC4-204, Transcript of immunoglobulin superfamily DCC subclass member 4, humanhuman

TSL 1 (best)

Gene IGDCC4, Length 5,544 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGDCC4-204ENST00000559327 TSPY26PQ9H489 355 aa23.23■■□□□ 1.31
IGDCC4-204ENST00000559327 CCDC39Q9UFE4 941 aa23.23■■□□□ 1.31
IGDCC4-204ENST00000559327 KRT85P78386 507 aa23.23■■□□□ 1.31
IGDCC4-204ENST00000559327 ZNF287Q9HBT7 754 aa23.23■■□□□ 1.31
IGDCC4-204ENST00000559327 IL16Q14005 1332 aa23.23■■□□□ 1.31
IGDCC4-204ENST00000559327 WASF1Q92558 559 aa23.23■■□□□ 1.31
IGDCC4-204ENST00000559327 TRMT112Q9UI30 125 aaKnown RBP23.22■■□□□ 1.31
IGDCC4-204ENST00000559327 CEBPZQ03701 1054 aaKnown RBP23.22■■□□□ 1.31
IGDCC4-204ENST00000559327 PDILTQ8N807 584 aa23.22■■□□□ 1.31
IGDCC4-204ENST00000559327 CNKSR2Q8WXI2 1034 aa23.22■■□□□ 1.31
IGDCC4-204ENST00000559327 ABCF2Q9UG63 623 aa23.22■■□□□ 1.31
IGDCC4-204ENST00000559327 SPINK5Q9NQ38 1064 aaPredicted RBP23.22■■□□□ 1.31
IGDCC4-204ENST00000559327 FLIIQ13045 1269 aa23.21■■□□□ 1.31
IGDCC4-204ENST00000559327 TRAPPC8Q9Y2L5 1435 aa23.2■■□□□ 1.3
IGDCC4-204ENST00000559327 ODF2Q5BJF6 829 aa23.2■■□□□ 1.3
IGDCC4-204ENST00000559327 U3KPZ7 1027 aaPredicted RBP23.2■■□□□ 1.3
IGDCC4-204ENST00000559327 TMEM132AQ24JP5 1023 aa23.2■■□□□ 1.3
IGDCC4-204ENST00000559327 TRIM5Q9C035 493 aa23.2■■□□□ 1.3
IGDCC4-204ENST00000559327 FAM13BQ9NYF5 915 aa23.2■■□□□ 1.3
IGDCC4-204ENST00000559327 WDR62O43379 1518 aa23.2■■□□□ 1.3
IGDCC4-204ENST00000559327 ANKRD18BA2A2Z9 1011 aa23.19■■□□□ 1.3
IGDCC4-204ENST00000559327 SLC5A1P13866 664 aa23.19■■□□□ 1.3
IGDCC4-204ENST00000559327 WWC2Q6AWC2 1192 aa23.19■■□□□ 1.3
IGDCC4-204ENST00000559327 DACH1Q9UI36 760 aa23.19■■□□□ 1.3
IGDCC4-204ENST00000559327 NPHP3Q7Z494 1330 aa23.19■■□□□ 1.3
IGDCC4-204ENST00000559327 PDZRN4Q6ZMN7 1036 aaPredicted RBP23.19■■□□□ 1.3
IGDCC4-204ENST00000559327 PPIP5K1Q6PFW1 1433 aa23.19■■□□□ 1.3
IGDCC4-204ENST00000559327 TCOF1Q13428 1488 aaKnown RBP23.19■■□□□ 1.3
IGDCC4-204ENST00000559327 ME1P48163 572 aa23.19■■□□□ 1.3
IGDCC4-204ENST00000559327 RNF214Q8ND24 703 aa23.19■■□□□ 1.3
IGDCC4-204ENST00000559327 RSPH6AQ9H0K4 717 aa23.19■■□□□ 1.3
IGDCC4-204ENST00000559327 F6X3S4 739 aa23.18■■□□□ 1.3
IGDCC4-204ENST00000559327 SMARCE1Q969G3 411 aa23.18■■□□□ 1.3
IGDCC4-204ENST00000559327 LRRFIP2Q9Y608 721 aaKnown RBP23.18■■□□□ 1.3
IGDCC4-204ENST00000559327 PIK3R4Q99570 1358 aa23.18■■□□□ 1.3
IGDCC4-204ENST00000559327 PTPRKQ15262 1439 aa23.18■■□□□ 1.3
IGDCC4-204ENST00000559327 SMC2O95347 1197 aa23.17■■□□□ 1.3
IGDCC4-204ENST00000559327 A0A087WZG4 1122 aa23.17■■□□□ 1.3
IGDCC4-204ENST00000559327 CIZ1Q9ULV3 898 aaPredicted RBP23.17■■□□□ 1.3
IGDCC4-204ENST00000559327 ANKIB1Q9P2G1 1089 aa23.17■■□□□ 1.3
IGDCC4-204ENST00000559327 EIF2AK4Q9P2K8 1649 aaKnown RBP23.17■■□□□ 1.3
IGDCC4-204ENST00000559327 STIM1Q13586 685 aa23.16■■□□□ 1.3
IGDCC4-204ENST00000559327 CFAP45Q9UL16 551 aa23.16■■□□□ 1.3
IGDCC4-204ENST00000559327 MAP3K12Q12852 859 aa23.16■■□□□ 1.3
IGDCC4-204ENST00000559327 MNS1Q8NEH6 495 aa23.16■■□□□ 1.3
IGDCC4-204ENST00000559327 SHANK2Q9UPX8 1470 aa23.16■■□□□ 1.3
IGDCC4-204ENST00000559327 ASXL1Q8IXJ9 1541 aa23.16■■□□□ 1.3
IGDCC4-204ENST00000559327 PRAG1Q86YV5 1406 aa23.15■■□□□ 1.3
IGDCC4-204ENST00000559327 CASTP20810 708 aaKnown RBP23.15■■□□□ 1.3
IGDCC4-204ENST00000559327 RPGRQ92834 1020 aaKnown RBP23.15■■□□□ 1.3
IGDCC4-204ENST00000559327 SMARCA5O60264 1052 aaPredicted RBP23.15■■□□□ 1.3
IGDCC4-204ENST00000559327 USP5P45974 858 aa23.15■■□□□ 1.3
IGDCC4-204ENST00000559327 BOLA2Q9H3K6 86 aa23.15■■□□□ 1.3
IGDCC4-204ENST00000559327 MBIPQ9NS73 344 aa23.15■■□□□ 1.3
IGDCC4-204ENST00000559327 SNRPA1P09661 255 aaKnown RBP23.14■■□□□ 1.3
IGDCC4-204ENST00000559327 CCDC192P0DO97 292 aa23.14■■□□□ 1.3
IGDCC4-204ENST00000559327 MAP3K2Q9Y2U5 619 aa23.14■■□□□ 1.3
IGDCC4-204ENST00000559327 DHX8Q14562 1220 aaKnown RBP23.14■■□□□ 1.29
IGDCC4-204ENST00000559327 EIF4G3O43432 1585 aaKnown RBP23.14■■□□□ 1.29
IGDCC4-204ENST00000559327 TRIM27P14373 513 aa23.13■■□□□ 1.29
IGDCC4-204ENST00000559327 PUS7Q96PZ0 661 aaKnown RBP23.13■■□□□ 1.29
IGDCC4-204ENST00000559327 TNMDQ9H2S6 317 aa23.13■■□□□ 1.29
IGDCC4-204ENST00000559327 CWC25Q9NXE8 425 aaPredicted RBP23.13■■□□□ 1.29
IGDCC4-204ENST00000559327 CCP110O43303 1012 aa23.13■■□□□ 1.29
IGDCC4-204ENST00000559327 DZIP1Q86YF9 867 aaKnown RBP23.13■■□□□ 1.29
IGDCC4-204ENST00000559327 ZBTB3Q9H5J0 574 aa23.12■■□□□ 1.29
IGDCC4-204ENST00000559327 CCDC173Q0VFZ6 552 aa23.12■■□□□ 1.29
IGDCC4-204ENST00000559327 ABCC2Q92887 1545 aa23.12■■□□□ 1.29
IGDCC4-204ENST00000559327 CHRNA2Q15822 529 aa23.12■■□□□ 1.29
IGDCC4-204ENST00000559327 SPATA32Q96LK8 384 aa23.12■■□□□ 1.29
IGDCC4-204ENST00000559327 ARGLU1Q9NWB6 273 aaPredicted RBP23.12■■□□□ 1.29
IGDCC4-204ENST00000559327 SLF2Q8IX21 1173 aa23.12■■□□□ 1.29
IGDCC4-204ENST00000559327 FAM43AQ8N2R8 423 aa23.12■■□□□ 1.29
IGDCC4-204ENST00000559327 POLR3DP05423 398 aaPredicted RBP23.11■■□□□ 1.29
IGDCC4-204ENST00000559327 AK7Q96M32 723 aa23.11■■□□□ 1.29
IGDCC4-204ENST00000559327 NAPBQ9H115 298 aa23.11■■□□□ 1.29
IGDCC4-204ENST00000559327 TOM1O60784 492 aa23.11■■□□□ 1.29
IGDCC4-204ENST00000559327 HMGB1P09429 215 aaKnown RBP23.1■■□□□ 1.29
IGDCC4-204ENST00000559327 PPP1R42Q7Z4L9 355 aa23.1■■□□□ 1.29
IGDCC4-204ENST00000559327 CDC5LQ99459 802 aaKnown RBP23.1■■□□□ 1.29
IGDCC4-204ENST00000559327 PRPF40BQ6NWY9 871 aaKnown RBP23.1■■□□□ 1.29
IGDCC4-204ENST00000559327 CCDC8Q9H0W5 538 aaPredicted RBP23.09■■□□□ 1.29
IGDCC4-204ENST00000559327 BMP2KQ9NSY1 1161 aaPredicted RBP23.09■■□□□ 1.29
IGDCC4-204ENST00000559327 SYCP1Q15431 976 aa23.09■■□□□ 1.29
IGDCC4-204ENST00000559327 C20orf194Q5TEA3 1177 aa23.09■■□□□ 1.29
IGDCC4-204ENST00000559327 CEP131Q9UPN4 1083 aa23.09■■□□□ 1.29
IGDCC4-204ENST00000559327 CFAP43Q8NDM7 1665 aa23.09■■□□□ 1.29
IGDCC4-204ENST00000559327 ZCRB1Q8TBF4 217 aaKnown RBP23.08■■□□□ 1.29
IGDCC4-204ENST00000559327 FAM83GA6ND36 823 aa23.08■■□□□ 1.29
IGDCC4-204ENST00000559327 GPTP24298 496 aa23.08■■□□□ 1.29
IGDCC4-204ENST00000559327 TNNT3P45378 269 aaPredicted RBP23.08■■□□□ 1.29
IGDCC4-204ENST00000559327 CRACR2BQ8N4Y2 399 aaPredicted RBP23.08■■□□□ 1.29
IGDCC4-204ENST00000559327 ACBD3Q9H3P7 528 aa23.08■■□□□ 1.29
IGDCC4-204ENST00000559327 MKNK2Q9HBH9 465 aa23.08■■□□□ 1.29
IGDCC4-204ENST00000559327 KIF21AQ7Z4S6 1674 aa23.08■■□□□ 1.29
IGDCC4-204ENST00000559327 CCDC196A0A1B0GTZ2 297 aa23.08■■□□□ 1.28
IGDCC4-204ENST00000559327 MPHOSPH10O00566 681 aaKnown RBP23.08■■□□□ 1.28
IGDCC4-204ENST00000559327 ZFYVE27Q5T4F4 411 aa23.08■■□□□ 1.28
IGDCC4-204ENST00000559327 RUFY1Q96T51 708 aa23.08■■□□□ 1.28
IGDCC4-204ENST00000559327 HSP90AB2PQ58FF8 381 aa23.07■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms