RNA–Protein interactions for RNA: ENST00000558662.5

HMBOX1-212, Transcript of homeobox containing 1, humanhuman

TSL 5 BASIC

Gene HMBOX1, Length 1,765 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-212ENST00000558662 CDC25BP30305 580 aa19.35■□□□□ 0.69
HMBOX1-212ENST00000558662 EFCAB2Q5VUJ9 269 aa19.35■□□□□ 0.69
HMBOX1-212ENST00000558662 C14orf93Q9H972 538 aaKnown RBP19.35■□□□□ 0.69
HMBOX1-212ENST00000558662 CPSF1Q10570 1443 aaKnown RBP19.35■□□□□ 0.69
HMBOX1-212ENST00000558662 LMOD3Q0VAK6 560 aa19.34■□□□□ 0.69
HMBOX1-212ENST00000558662 YY1AP1Q9H869 796 aa19.34■□□□□ 0.69
HMBOX1-212ENST00000558662 EFCAB6Q5THR3 1501 aa19.34■□□□□ 0.69
HMBOX1-212ENST00000558662 RPGRIP1LQ68CZ1 1315 aa19.34■□□□□ 0.69
HMBOX1-212ENST00000558662 LMTK2Q8IWU2 1503 aa19.34■□□□□ 0.69
HMBOX1-212ENST00000558662 LRRC7Q96NW7 1537 aa19.34■□□□□ 0.69
HMBOX1-212ENST00000558662 HTATSF1O43719 755 aaKnown RBP19.34■□□□□ 0.69
HMBOX1-212ENST00000558662 ZNF853P0CG23 659 aa19.34■□□□□ 0.69
HMBOX1-212ENST00000558662 BMS1Q14692 1282 aaKnown RBP19.34■□□□□ 0.69
HMBOX1-212ENST00000558662 KIF1BPQ96EK5 621 aa19.34■□□□□ 0.69
HMBOX1-212ENST00000558662 KCND1Q9NSA2 647 aa19.34■□□□□ 0.69
HMBOX1-212ENST00000558662 TUBB4AP04350 444 aa19.33■□□□□ 0.68
HMBOX1-212ENST00000558662 CTR9Q6PD62 1173 aa19.33■□□□□ 0.68
HMBOX1-212ENST00000558662 ESYT1Q9BSJ8 1104 aa19.33■□□□□ 0.68
HMBOX1-212ENST00000558662 SRCIN1Q9C0H9 1055 aa19.33■□□□□ 0.68
HMBOX1-212ENST00000558662 ARHGEF28Q8N1W1 1705 aaKnown RBP19.33■□□□□ 0.68
HMBOX1-212ENST00000558662 IGSF3O75054 1194 aa19.32■□□□□ 0.68
HMBOX1-212ENST00000558662 CYP2C19P33261 490 aa19.32■□□□□ 0.68
HMBOX1-212ENST00000558662 TULP4Q9NRJ4 1543 aa19.32■□□□□ 0.68
HMBOX1-212ENST00000558662 SPAG9O60271 1321 aaKnown RBP19.32■□□□□ 0.68
HMBOX1-212ENST00000558662 FOXD4L5Q5VV16 416 aaPredicted RBP19.32■□□□□ 0.68
HMBOX1-212ENST00000558662 FOXD4L4Q8WXT5 416 aaPredicted RBP19.32■□□□□ 0.68
HMBOX1-212ENST00000558662 NFE2L2Q16236 605 aa19.31■□□□□ 0.68
HMBOX1-212ENST00000558662 IRX3P78415 501 aaPredicted RBP19.3■□□□□ 0.68
HMBOX1-212ENST00000558662 MUM1L1Q5H9M0 696 aa19.3■□□□□ 0.68
HMBOX1-212ENST00000558662 TEX35Q5T0J7 233 aa19.3■□□□□ 0.68
HMBOX1-212ENST00000558662 CEP135Q66GS9 1140 aa19.3■□□□□ 0.68
HMBOX1-212ENST00000558662 AEBP1Q8IUX7 1158 aa19.3■□□□□ 0.68
HMBOX1-212ENST00000558662 CHAMP1Q96JM3 812 aa19.3■□□□□ 0.68
HMBOX1-212ENST00000558662 CEP85Q6P2H3 762 aa19.29■□□□□ 0.68
HMBOX1-212ENST00000558662 AOX1Q06278 1338 aa19.29■□□□□ 0.68
HMBOX1-212ENST00000558662 ARHGEF40Q8TER5 1519 aa19.29■□□□□ 0.68
HMBOX1-212ENST00000558662 ZBTB7CA1YPR0 619 aa19.29■□□□□ 0.68
HMBOX1-212ENST00000558662 VGLL3A8MV65 326 aa19.29■□□□□ 0.68
HMBOX1-212ENST00000558662 F13A1P00488 732 aa19.29■□□□□ 0.68
HMBOX1-212ENST00000558662 PTGS1P23219 599 aa19.29■□□□□ 0.68
HMBOX1-212ENST00000558662 NOL10Q9BSC4 688 aaKnown RBP19.29■□□□□ 0.68
HMBOX1-212ENST00000558662 STX6O43752 255 aa19.28■□□□□ 0.68
HMBOX1-212ENST00000558662 SMARCA5O60264 1052 aaPredicted RBP19.28■□□□□ 0.68
HMBOX1-212ENST00000558662 RBM6P78332 1123 aaKnown RBP19.28■□□□□ 0.68
HMBOX1-212ENST00000558662 DHX8Q14562 1220 aaKnown RBP19.28■□□□□ 0.68
HMBOX1-212ENST00000558662 TWISTNBQ3B726 338 aaPredicted RBP19.28■□□□□ 0.68
HMBOX1-212ENST00000558662 ZSCAN25Q6NSZ9 544 aa19.28■□□□□ 0.68
HMBOX1-212ENST00000558662 PLA2G4DQ86XP0 818 aa19.28■□□□□ 0.68
HMBOX1-212ENST00000558662 KIF20BQ96Q89 1820 aa19.28■□□□□ 0.68
HMBOX1-212ENST00000558662 AP5Z1O43299 807 aa19.27■□□□□ 0.68
HMBOX1-212ENST00000558662 PDE1AP54750 535 aa19.27■□□□□ 0.68
HMBOX1-212ENST00000558662 TPD52L1Q16890 204 aaPredicted RBP19.27■□□□□ 0.68
HMBOX1-212ENST00000558662 KMT5BQ4FZB7 885 aa19.27■□□□□ 0.68
HMBOX1-212ENST00000558662 TXLNBQ8N3L3 684 aa19.27■□□□□ 0.68
HMBOX1-212ENST00000558662 MPNDQ8N594 471 aa19.27■□□□□ 0.68
HMBOX1-212ENST00000558662 ELP1O95163 1332 aa19.27■□□□□ 0.68
HMBOX1-212ENST00000558662 PTPRCP08575 1304 aa19.27■□□□□ 0.68
HMBOX1-212ENST00000558662 CLTCQ00610 1675 aaKnown RBP19.27■□□□□ 0.68
HMBOX1-212ENST00000558662 ATP8B1O43520 1251 aa19.27■□□□□ 0.67
HMBOX1-212ENST00000558662 PLCB2Q00722 1185 aa19.27■□□□□ 0.67
HMBOX1-212ENST00000558662 MAP3K11Q16584 847 aa19.27■□□□□ 0.67
HMBOX1-212ENST00000558662 C16orf71Q8IYS4 520 aaPredicted RBP19.27■□□□□ 0.67
HMBOX1-212ENST00000558662 TDRD7Q8NHU6 1098 aaKnown RBP19.27■□□□□ 0.67
HMBOX1-212ENST00000558662 C16orf45Q96MC5 204 aaPredicted RBP19.27■□□□□ 0.67
HMBOX1-212ENST00000558662 CNPY2Q9Y2B0 182 aa19.27■□□□□ 0.67
HMBOX1-212ENST00000558662 MROH1Q8NDA8 1641 aa19.26■□□□□ 0.67
HMBOX1-212ENST00000558662 SPC24Q8NBT2 197 aa19.26■□□□□ 0.67
HMBOX1-212ENST00000558662 GDPD2Q9HCC8 539 aa19.26■□□□□ 0.67
HMBOX1-212ENST00000558662 KIAA0232Q92628 1395 aa19.26■□□□□ 0.67
HMBOX1-212ENST00000558662 CAPN2P17655 700 aa19.25■□□□□ 0.67
HMBOX1-212ENST00000558662 ZNF75DP51815 510 aa19.25■□□□□ 0.67
HMBOX1-212ENST00000558662 TPM4P67936 248 aa19.25■□□□□ 0.67
HMBOX1-212ENST00000558662 CCDC186Q7Z3E2 898 aa19.25■□□□□ 0.67
HMBOX1-212ENST00000558662 SLU7O95391 586 aaKnown RBP19.24■□□□□ 0.67
HMBOX1-212ENST00000558662 GIMAP6Q6P9H5 292 aa19.24■□□□□ 0.67
HMBOX1-212ENST00000558662 TERF2IPQ9NYB0 399 aa19.24■□□□□ 0.67
HMBOX1-212ENST00000558662 CDK12Q9NYV4 1490 aaPredicted RBP19.24■□□□□ 0.67
HMBOX1-212ENST00000558662 ZBTB22O15209 634 aa19.24■□□□□ 0.67
HMBOX1-212ENST00000558662 NYAP1Q6ZVC0 841 aa19.24■□□□□ 0.67
HMBOX1-212ENST00000558662 FEZ2Q9UHY8 353 aaPredicted RBP19.24■□□□□ 0.67
HMBOX1-212ENST00000558662 TRAK1Q9UPV9 953 aa19.24■□□□□ 0.67
HMBOX1-212ENST00000558662 V9GYY5 206 aaPredicted RBP19.24■□□□□ 0.67
HMBOX1-212ENST00000558662 ATP7AQ04656 1500 aa19.23■□□□□ 0.67
HMBOX1-212ENST00000558662 A0A1W2PP64 1363 aa19.23■□□□□ 0.67
HMBOX1-212ENST00000558662 PTPN14Q15678 1187 aa19.23■□□□□ 0.67
HMBOX1-212ENST00000558662 SARM1Q6SZW1 724 aa19.23■□□□□ 0.67
HMBOX1-212ENST00000558662 RBM43Q6ZSC3 357 aaKnown RBP19.23■□□□□ 0.67
HMBOX1-212ENST00000558662 TEX2Q8IWB9 1127 aa19.23■□□□□ 0.67
HMBOX1-212ENST00000558662 DDX19AQ9NUU7 478 aaKnown RBP19.23■□□□□ 0.67
HMBOX1-212ENST00000558662 HSPA4P34932 840 aa19.22■□□□□ 0.67
HMBOX1-212ENST00000558662 DRC7Q8IY82 874 aa19.22■□□□□ 0.67
HMBOX1-212ENST00000558662 NUP62CLQ9H1M0 184 aa19.22■□□□□ 0.67
HMBOX1-212ENST00000558662 RAD50Q92878 1312 aa19.22■□□□□ 0.67
HMBOX1-212ENST00000558662 SALL3Q9BXA9 1300 aa19.22■□□□□ 0.67
HMBOX1-212ENST00000558662 H2AFXP16104 143 aaPredicted RBP19.21■□□□□ 0.67
HMBOX1-212ENST00000558662 CHMLP26374 656 aa19.21■□□□□ 0.67
HMBOX1-212ENST00000558662 TYRO3Q06418 890 aa19.21■□□□□ 0.67
HMBOX1-212ENST00000558662 GPS2Q13227 327 aa19.21■□□□□ 0.67
HMBOX1-212ENST00000558662 OTUD7AQ8TE49 926 aaPredicted RBP19.21■□□□□ 0.67
HMBOX1-212ENST00000558662 ZSCAN31Q96LW9 406 aaPredicted RBP19.21■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms