RNA–Protein interactions for RNA: ENST00000558335.5

GABPB1-207, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 3

Gene GABPB1, Length 406 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-207ENST00000558335 POLKQ9UBT6 870 aa6.7□□□□□ -1.34
GABPB1-207ENST00000558335 TTC21AQ8NDW8 1320 aa6.7□□□□□ -1.34
GABPB1-207ENST00000558335 DLG5Q8TDM6 1919 aa6.7□□□□□ -1.34
GABPB1-207ENST00000558335 RIMS1Q86UR5 1692 aaKnown RBP6.69□□□□□ -1.34
GABPB1-207ENST00000558335 CCDC66A2RUB6 948 aa6.69□□□□□ -1.34
GABPB1-207ENST00000558335 ESPNB1AK53 854 aa6.69□□□□□ -1.34
GABPB1-207ENST00000558335 RAPGEF3O95398 923 aa6.69□□□□□ -1.34
GABPB1-207ENST00000558335 SEC24BO95487 1268 aa6.69□□□□□ -1.34
GABPB1-207ENST00000558335 RAB3GAP1Q15042 981 aa6.69□□□□□ -1.34
GABPB1-207ENST00000558335 HS1BP3Q53T59 392 aa6.69□□□□□ -1.34
GABPB1-207ENST00000558335 SRCIN1Q9C0H9 1055 aa6.69□□□□□ -1.34
GABPB1-207ENST00000558335 DCTPP1Q9H773 170 aa6.69□□□□□ -1.34
GABPB1-207ENST00000558335 DIP2BQ9P265 1576 aa6.69□□□□□ -1.34
GABPB1-207ENST00000558335 RTL1A6NKG5 1358 aa6.69□□□□□ -1.34
GABPB1-207ENST00000558335 NALCNQ8IZF0 1738 aa6.68□□□□□ -1.34
GABPB1-207ENST00000558335 TTC36A6NLP5 189 aa6.68□□□□□ -1.34
GABPB1-207ENST00000558335 IL13P35225 146 aa6.68□□□□□ -1.34
GABPB1-207ENST00000558335 PLCB2Q00722 1185 aa6.68□□□□□ -1.34
GABPB1-207ENST00000558335 CCDC173Q0VFZ6 552 aa6.68□□□□□ -1.34
GABPB1-207ENST00000558335 CSPP1Q1MSJ5 1256 aa6.68□□□□□ -1.34
GABPB1-207ENST00000558335 NBPF11Q86T75 865 aa6.68□□□□□ -1.34
GABPB1-207ENST00000558335 SKAP1Q86WV1 359 aa6.68□□□□□ -1.34
GABPB1-207ENST00000558335 SUGP2Q8IX01 1082 aaKnown RBP eCLIP6.68□□□□□ -1.34
GABPB1-207ENST00000558335 RTF1Q92541 710 aaKnown RBP6.68□□□□□ -1.34
GABPB1-207ENST00000558335 SYAP1Q96A49 352 aaPredicted RBP6.68□□□□□ -1.34
GABPB1-207ENST00000558335 LNPKQ9C0E8 428 aa6.68□□□□□ -1.34
GABPB1-207ENST00000558335 DIP2AQ14689 1571 aa6.68□□□□□ -1.34
GABPB1-207ENST00000558335 TOPAZ1Q8N9V7 1692 aa6.68□□□□□ -1.34
GABPB1-207ENST00000558335 SSH2Q76I76 1423 aa6.67□□□□□ -1.34
GABPB1-207ENST00000558335 OFD1O75665 1012 aa6.67□□□□□ -1.34
GABPB1-207ENST00000558335 MBD3O95983 291 aa6.67□□□□□ -1.34
GABPB1-207ENST00000558335 GNAI3P08754 354 aa6.67□□□□□ -1.34
GABPB1-207ENST00000558335 DDIT3P35638 169 aa6.67□□□□□ -1.34
GABPB1-207ENST00000558335 SSR1P43307 286 aaKnown RBP6.67□□□□□ -1.34
GABPB1-207ENST00000558335 ANAPC15P60006 121 aa6.67□□□□□ -1.34
GABPB1-207ENST00000558335 SAFB2Q14151 953 aaKnown RBP eCLIP6.67□□□□□ -1.34
GABPB1-207ENST00000558335 KLHL40Q2TBA0 621 aa6.67□□□□□ -1.34
GABPB1-207ENST00000558335 CREBRFQ8IUR6 639 aa6.67□□□□□ -1.34
GABPB1-207ENST00000558335 ANKRD44Q8N8A2 993 aa6.67□□□□□ -1.34
GABPB1-207ENST00000558335 GPATCH11Q8N954 259 aa6.67□□□□□ -1.34
GABPB1-207ENST00000558335 GAS2L2Q8NHY3 880 aa6.67□□□□□ -1.34
GABPB1-207ENST00000558335 NUDT16Q96DE0 195 aaKnown RBP6.67□□□□□ -1.34
GABPB1-207ENST00000558335 CARD10Q9BWT7 1032 aa6.67□□□□□ -1.34
GABPB1-207ENST00000558335 GRPEL1Q9HAV7 217 aa6.67□□□□□ -1.34
GABPB1-207ENST00000558335 N4BP2Q86UW6 1770 aaPredicted RBP6.67□□□□□ -1.34
GABPB1-207ENST00000558335 PLEKHG3A1L390 1219 aa6.66□□□□□ -1.34
GABPB1-207ENST00000558335 ZSCAN20P17040 1043 aaPredicted RBP6.66□□□□□ -1.34
GABPB1-207ENST00000558335 TTC22Q5TAA0 569 aa6.66□□□□□ -1.34
GABPB1-207ENST00000558335 TBC1D9Q6ZT07 1266 aa6.66□□□□□ -1.34
GABPB1-207ENST00000558335 PLCD3Q8N3E9 789 aa6.66□□□□□ -1.34
GABPB1-207ENST00000558335 STK31Q9BXU1 1019 aa6.66□□□□□ -1.34
GABPB1-207ENST00000558335 OSBPL3Q9H4L5 887 aa6.66□□□□□ -1.34
GABPB1-207ENST00000558335 MBIPQ9NS73 344 aa6.66□□□□□ -1.34
GABPB1-207ENST00000558335 BSDC1Q9NW68 430 aaPredicted RBP6.66□□□□□ -1.34
GABPB1-207ENST00000558335 FMN2Q9NZ56 1722 aa6.66□□□□□ -1.34
GABPB1-207ENST00000558335 AOX1Q06278 1338 aa6.66□□□□□ -1.34
GABPB1-207ENST00000558335 PXDNLA1KZ92 1463 aa6.66□□□□□ -1.34
GABPB1-207ENST00000558335 NRXN3Q9Y4C0 1643 aa6.65□□□□□ -1.34
GABPB1-207ENST00000558335 CHL1O00533 1208 aa6.65□□□□□ -1.34
GABPB1-207ENST00000558335 PITPNM1O00562 1244 aa6.65□□□□□ -1.34
GABPB1-207ENST00000558335 ERC2O15083 957 aa6.65□□□□□ -1.34
GABPB1-207ENST00000558335 MCM5P33992 734 aa6.65□□□□□ -1.34
GABPB1-207ENST00000558335 PIP4P2Q8N4L2 257 aa6.65□□□□□ -1.34
GABPB1-207ENST00000558335 RAI14Q9P0K7 980 aa6.65□□□□□ -1.34
GABPB1-207ENST00000558335 KCNG1Q9UIX4 513 aa6.65□□□□□ -1.34
GABPB1-207ENST00000558335 EID1Q9Y6B2 187 aa6.65□□□□□ -1.34
GABPB1-207ENST00000558335 USP31Q70CQ4 1352 aa6.65□□□□□ -1.35
GABPB1-207ENST00000558335 USP54Q70EL1 1684 aa6.65□□□□□ -1.35
GABPB1-207ENST00000558335 RGPD1P0DJD0 1748 aa6.64□□□□□ -1.35
GABPB1-207ENST00000558335 XRCC6P12956 609 aaKnown RBP eCLIP6.64□□□□□ -1.35
GABPB1-207ENST00000558335 HSP90AB4PQ58FF6 505 aa6.64□□□□□ -1.35
GABPB1-207ENST00000558335 CCDC30Q5VVM6 783 aa6.64□□□□□ -1.35
GABPB1-207ENST00000558335 KIAA1211Q6ZU35 1233 aa6.64□□□□□ -1.35
GABPB1-207ENST00000558335 TNPO1Q92973 898 aaKnown RBP6.64□□□□□ -1.35
GABPB1-207ENST00000558335 PRDM10Q9NQV6 1147 aa6.64□□□□□ -1.35
GABPB1-207ENST00000558335 ZHX1Q9UKY1 873 aaPredicted RBP6.64□□□□□ -1.35
GABPB1-207ENST00000558335 ATP6V1DQ9Y5K8 247 aa6.64□□□□□ -1.35
GABPB1-207ENST00000558335 SBNO1A3KN83 1393 aa6.64□□□□□ -1.35
GABPB1-207ENST00000558335 FLT4P35916 1363 aa6.64□□□□□ -1.35
GABPB1-207ENST00000558335 TNRQ92752 1358 aa6.64□□□□□ -1.35
GABPB1-207ENST00000558335 PLEKHG1Q9ULL1 1385 aa6.64□□□□□ -1.35
GABPB1-207ENST00000558335 UBR1Q8IWV7 1749 aa6.64□□□□□ -1.35
GABPB1-207ENST00000558335 OVOS2A0A0J9YW53 1432 aa6.63□□□□□ -1.35
GABPB1-207ENST00000558335 SPDYE2BA6NHP3 402 aa6.63□□□□□ -1.35
GABPB1-207ENST00000558335 RAB11FIP3O75154 756 aa6.63□□□□□ -1.35
GABPB1-207ENST00000558335 GNAI2P04899 355 aa6.63□□□□□ -1.35
GABPB1-207ENST00000558335 SPDYE6P0CI01 402 aa6.63□□□□□ -1.35
GABPB1-207ENST00000558335 MSH6P52701 1360 aa6.63□□□□□ -1.35
GABPB1-207ENST00000558335 ZNF445P59923 1031 aa6.63□□□□□ -1.35
GABPB1-207ENST00000558335 NBPF9Q3BBW0 867 aa6.63□□□□□ -1.35
GABPB1-207ENST00000558335 SPDYE2Q495Y8 402 aa6.63□□□□□ -1.35
GABPB1-207ENST00000558335 NUTM2DQ5VT03 806 aaPredicted RBP6.63□□□□□ -1.35
GABPB1-207ENST00000558335 OVOS2Q6IE36 1432 aa6.63□□□□□ -1.35
GABPB1-207ENST00000558335 ANKARQ7Z5J8 1434 aa6.63□□□□□ -1.35
GABPB1-207ENST00000558335 PLEKHM2Q8IWE5 1019 aa6.63□□□□□ -1.35
GABPB1-207ENST00000558335 MNS1Q8NEH6 495 aa6.63□□□□□ -1.35
GABPB1-207ENST00000558335 PTPRUQ92729 1446 aa6.63□□□□□ -1.35
GABPB1-207ENST00000558335 INTS4Q96HW7 963 aaKnown RBP6.63□□□□□ -1.35
GABPB1-207ENST00000558335 TMEM2Q9UHN6 1383 aa6.63□□□□□ -1.35
GABPB1-207ENST00000558335 TNNQ9UQP3 1299 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms