RNA–Protein interactions for RNA: ENST00000558240.1

CDK12-203, Transcript of cyclin dependent kinase 12, humanhuman

TSL 4

Gene CDK12, Length 555 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK12-203ENST00000558240 RUNDC1Q96C34 613 aa15.91■□□□□ 0.14
CDK12-203ENST00000558240 CEMIPQ8WUJ3 1361 aa15.9■□□□□ 0.14
CDK12-203ENST00000558240 PALLDQ8WX93 1383 aa15.9■□□□□ 0.14
CDK12-203ENST00000558240 HMGB2P26583 209 aaKnown RBP15.9■□□□□ 0.14
CDK12-203ENST00000558240 DIEXFQ68CQ4 756 aaKnown RBP15.9■□□□□ 0.14
CDK12-203ENST00000558240 ATG3Q9NT62 314 aa15.9■□□□□ 0.14
CDK12-203ENST00000558240 ASAP1Q9ULH1 1129 aa15.9■□□□□ 0.14
CDK12-203ENST00000558240 TAF1LQ8IZX4 1826 aa15.89■□□□□ 0.13
CDK12-203ENST00000558240 NBPF14Q5TI25 921 aa15.89■□□□□ 0.13
CDK12-203ENST00000558240 CCDC146Q8IYE0 955 aa15.89■□□□□ 0.13
CDK12-203ENST00000558240 TMPOP42166 694 aaKnown RBP15.88■□□□□ 0.13
CDK12-203ENST00000558240 TEFQ10587 303 aa15.88■□□□□ 0.13
CDK12-203ENST00000558240 LRRC4BQ9NT99 713 aa15.88■□□□□ 0.13
CDK12-203ENST00000558240 CCNL1Q9UK58 526 aaPredicted RBP15.88■□□□□ 0.13
CDK12-203ENST00000558240 ZNF831Q5JPB2 1677 aa15.88■□□□□ 0.13
CDK12-203ENST00000558240 PAPPAQ13219 1627 aa15.86■□□□□ 0.13
CDK12-203ENST00000558240 LOC102724428A0A0B4J2F2 783 aa15.86■□□□□ 0.13
CDK12-203ENST00000558240 SIK1P57059 783 aa15.86■□□□□ 0.13
CDK12-203ENST00000558240 RIPK4P57078 832 aa15.86■□□□□ 0.13
CDK12-203ENST00000558240 MCM10Q7L590 875 aa15.86■□□□□ 0.13
CDK12-203ENST00000558240 C5P01031 1676 aa15.86■□□□□ 0.13
CDK12-203ENST00000558240 LMOD3Q0VAK6 560 aa15.85■□□□□ 0.13
CDK12-203ENST00000558240 DCTN1Q14203 1278 aa15.85■□□□□ 0.13
CDK12-203ENST00000558240 UBR2Q8IWV8 1755 aa15.85■□□□□ 0.13
CDK12-203ENST00000558240 CCER2I3L3R5 266 aa15.84■□□□□ 0.13
CDK12-203ENST00000558240 ATP6V1AP38606 617 aa15.83■□□□□ 0.12
CDK12-203ENST00000558240 KCNQ4P56696 695 aa15.83■□□□□ 0.12
CDK12-203ENST00000558240 TAF7Q15545 349 aaPredicted RBP15.83■□□□□ 0.12
CDK12-203ENST00000558240 SLC15A2Q16348 729 aa15.83■□□□□ 0.12
CDK12-203ENST00000558240 RBM42Q9BTD8 480 aaKnown RBP15.83■□□□□ 0.12
CDK12-203ENST00000558240 ANO8Q9HCE9 1232 aaPredicted RBP15.83■□□□□ 0.12
CDK12-203ENST00000558240 STK32BQ9NY57 414 aa15.83■□□□□ 0.12
CDK12-203ENST00000558240 QSER1Q2KHR3 1735 aa15.82■□□□□ 0.12
CDK12-203ENST00000558240 BTBD11A6QL63 1104 aa15.82■□□□□ 0.12
CDK12-203ENST00000558240 APAF1O14727 1248 aa15.82■□□□□ 0.12
CDK12-203ENST00000558240 SLC39A6Q13433 755 aa15.82■□□□□ 0.12
CDK12-203ENST00000558240 R3HDM1Q15032 1099 aaKnown RBP15.82■□□□□ 0.12
CDK12-203ENST00000558240 NEUROD2Q15784 382 aa15.82■□□□□ 0.12
CDK12-203ENST00000558240 RRP7AQ9Y3A4 280 aaKnown RBP15.82■□□□□ 0.12
CDK12-203ENST00000558240 PTCD1O75127 700 aaKnown RBP15.81■□□□□ 0.12
CDK12-203ENST00000558240 COL5A3P25940 1745 aaPredicted RBP15.81■□□□□ 0.12
CDK12-203ENST00000558240 ZNF790Q6PG37 636 aa15.81■□□□□ 0.12
CDK12-203ENST00000558240 TTC5Q8N0Z6 440 aa15.81■□□□□ 0.12
CDK12-203ENST00000558240 AKT1S1Q96B36 256 aa15.81■□□□□ 0.12
CDK12-203ENST00000558240 SLC4A9Q96Q91 983 aa15.81■□□□□ 0.12
CDK12-203ENST00000558240 CICQ96RK0 1608 aaPredicted RBP15.81■□□□□ 0.12
CDK12-203ENST00000558240 TUBGCP6Q96RT7 1819 aa15.8■□□□□ 0.12
CDK12-203ENST00000558240 C4BP0C0L5 1744 aa15.8■□□□□ 0.12
CDK12-203ENST00000558240 KCPQ6ZWJ8 1503 aa15.8■□□□□ 0.12
CDK12-203ENST00000558240 ITPK1Q13572 414 aa15.8■□□□□ 0.12
CDK12-203ENST00000558240 FAM9BQ8IZU0 186 aa15.8■□□□□ 0.12
CDK12-203ENST00000558240 VSIG10Q8N0Z9 540 aa15.8■□□□□ 0.12
CDK12-203ENST00000558240 TRIM35Q9UPQ4 493 aa15.8■□□□□ 0.12
CDK12-203ENST00000558240 MYH14Q7Z406 1995 aaKnown RBP15.8■□□□□ 0.12
CDK12-203ENST00000558240 PSDA5PKW4 1024 aaPredicted RBP15.79■□□□□ 0.12
CDK12-203ENST00000558240 ZNF827Q17R98 1081 aa15.79■□□□□ 0.12
CDK12-203ENST00000558240 NCBP3Q53F19 620 aaKnown RBP15.79■□□□□ 0.12
CDK12-203ENST00000558240 THUMPD2Q9BTF0 503 aaKnown RBP15.79■□□□□ 0.12
CDK12-203ENST00000558240 KDM3BQ7LBC6 1761 aa15.79■□□□□ 0.12
CDK12-203ENST00000558240 TJP1Q07157 1748 aa15.79■□□□□ 0.12
CDK12-203ENST00000558240 UBR3Q6ZT12 1888 aa15.78■□□□□ 0.12
CDK12-203ENST00000558240 MIER1Q8N108 512 aa15.78■□□□□ 0.12
CDK12-203ENST00000558240 LINC00116Q8NCU8 138 aa15.78■□□□□ 0.12
CDK12-203ENST00000558240 BABAM1Q9NWV8 329 aa15.78■□□□□ 0.12
CDK12-203ENST00000558240 RC3H1Q5TC82 1133 aaKnown RBP15.77■□□□□ 0.12
CDK12-203ENST00000558240 ZNF496Q96IT1 587 aaPredicted RBP15.77■□□□□ 0.12
CDK12-203ENST00000558240 FMNL2Q96PY5 1086 aa15.77■□□□□ 0.12
CDK12-203ENST00000558240 TFCP2L1Q9NZI6 479 aa15.77■□□□□ 0.12
CDK12-203ENST00000558240 KCNQ3O43525 872 aa15.76■□□□□ 0.11
CDK12-203ENST00000558240 CCDC27Q2M243 656 aa15.76■□□□□ 0.11
CDK12-203ENST00000558240 TEX13AQ9BXU3 409 aaPredicted RBP15.76■□□□□ 0.11
CDK12-203ENST00000558240 CASZ1Q86V15 1759 aa15.76■□□□□ 0.11
CDK12-203ENST00000558240 SRCAPQ6ZRS2 3230 aa15.75■□□□□ 0.11
CDK12-203ENST00000558240 HEG1Q9ULI3 1381 aa15.75■□□□□ 0.11
CDK12-203ENST00000558240 CNTNAP4Q9C0A0 1308 aa15.75■□□□□ 0.11
CDK12-203ENST00000558240 AK7Q96M32 723 aa15.75■□□□□ 0.11
CDK12-203ENST00000558240 MIS18AQ9NYP9 233 aa15.75■□□□□ 0.11
CDK12-203ENST00000558240 CALD1Q05682 793 aaKnown RBP15.74■□□□□ 0.11
CDK12-203ENST00000558240 DNAJC10Q8IXB1 793 aa15.74■□□□□ 0.11
CDK12-203ENST00000558240 NGEFQ8N5V2 710 aa15.74■□□□□ 0.11
CDK12-203ENST00000558240 FLAD1Q8NFF5 587 aa15.74■□□□□ 0.11
CDK12-203ENST00000558240 PNPLA7Q6ZV29 1317 aa15.73■□□□□ 0.11
CDK12-203ENST00000558240 STARD3NLO95772 234 aa15.73■□□□□ 0.11
CDK12-203ENST00000558240 CYP19A1P11511 503 aaPredicted RBP15.73■□□□□ 0.11
CDK12-203ENST00000558240 TSPYL4Q9UJ04 414 aa15.73■□□□□ 0.11
CDK12-203ENST00000558240 CHL1O00533 1208 aa15.72■□□□□ 0.11
CDK12-203ENST00000558240 GNPATO15228 680 aa15.72■□□□□ 0.11
CDK12-203ENST00000558240 SNRPA1P09661 255 aaKnown RBP15.72■□□□□ 0.11
CDK12-203ENST00000558240 SSFA2P28290 1259 aa15.72■□□□□ 0.11
CDK12-203ENST00000558240 CRKLP46109 303 aaKnown RBP15.72■□□□□ 0.11
CDK12-203ENST00000558240 CFAP44Q96MT7 982 aa15.72■□□□□ 0.11
CDK12-203ENST00000558240 RPS6KA4O75676 772 aa15.71■□□□□ 0.11
CDK12-203ENST00000558240 EIF4A1P60842 406 aaKnown RBP15.71■□□□□ 0.11
CDK12-203ENST00000558240 WWC1Q8IX03 1113 aa15.71■□□□□ 0.11
CDK12-203ENST00000558240 SLC16A10Q8TF71 515 aa15.71■□□□□ 0.11
CDK12-203ENST00000558240 PDGFDQ9GZP0 370 aaPredicted RBP15.71■□□□□ 0.11
CDK12-203ENST00000558240 RTCBQ9Y3I0 505 aaKnown RBP15.71■□□□□ 0.11
CDK12-203ENST00000558240 ZNF853P0CG23 659 aa15.7■□□□□ 0.1
CDK12-203ENST00000558240 ADRA2BP18089 450 aa15.7■□□□□ 0.1
CDK12-203ENST00000558240 INTS5Q6P9B9 1019 aaKnown RBP15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms