RNA–Protein interactions for RNA: ENST00000557978.6

PBX4-202, Transcript of PBX homeobox 4, humanhuman

TSL 1 (best)

Gene PBX4, Length 1,416 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX4-202ENST00000557978 PROM2Q8N271 834 aa22.13■■□□□ 1.13
PBX4-202ENST00000557978 NFE2L2Q16236 605 aa22.12■■□□□ 1.13
PBX4-202ENST00000557978 PALLDQ8WX93 1383 aa22.11■■□□□ 1.13
PBX4-202ENST00000557978 TEFQ10587 303 aa22.11■■□□□ 1.13
PBX4-202ENST00000557978 NBPF14Q5TI25 921 aa22.11■■□□□ 1.13
PBX4-202ENST00000557978 IL17REQ8NFR9 667 aa22.11■■□□□ 1.13
PBX4-202ENST00000557978 PNISRQ8TF01 805 aaKnown RBP22.11■■□□□ 1.13
PBX4-202ENST00000557978 ZNF831Q5JPB2 1677 aa22.1■■□□□ 1.13
PBX4-202ENST00000557978 C5P01031 1676 aa22.09■■□□□ 1.13
PBX4-202ENST00000557978 CCDC146Q8IYE0 955 aa22.09■■□□□ 1.13
PBX4-202ENST00000557978 ASAP1Q9ULH1 1129 aa22.09■■□□□ 1.13
PBX4-202ENST00000557978 PAPPAQ13219 1627 aa22.09■■□□□ 1.13
PBX4-202ENST00000557978 CEMIPQ8WUJ3 1361 aa22.09■■□□□ 1.13
PBX4-202ENST00000557978 ATG3Q9NT62 314 aa22.08■■□□□ 1.13
PBX4-202ENST00000557978 CCNL1Q9UK58 526 aaPredicted RBP22.08■■□□□ 1.13
PBX4-202ENST00000557978 TMPOP42166 694 aaKnown RBP22.06■■□□□ 1.12
PBX4-202ENST00000557978 RIPK4P57078 832 aa22.06■■□□□ 1.12
PBX4-202ENST00000557978 UBR2Q8IWV8 1755 aa22.06■■□□□ 1.12
PBX4-202ENST00000557978 LMOD3Q0VAK6 560 aa22.06■■□□□ 1.12
PBX4-202ENST00000557978 MCM10Q7L590 875 aa22.06■■□□□ 1.12
PBX4-202ENST00000557978 LRRC4BQ9NT99 713 aa22.06■■□□□ 1.12
PBX4-202ENST00000557978 LOC102724428A0A0B4J2F2 783 aa22.04■■□□□ 1.12
PBX4-202ENST00000557978 SIK1P57059 783 aa22.04■■□□□ 1.12
PBX4-202ENST00000557978 QSER1Q2KHR3 1735 aa22.04■■□□□ 1.12
PBX4-202ENST00000557978 CCER2I3L3R5 266 aa22.03■■□□□ 1.12
PBX4-202ENST00000557978 DCTN1Q14203 1278 aa22.03■■□□□ 1.12
PBX4-202ENST00000557978 RBM42Q9BTD8 480 aaKnown RBP22.03■■□□□ 1.12
PBX4-202ENST00000557978 NEUROD2Q15784 382 aa22.02■■□□□ 1.12
PBX4-202ENST00000557978 TTC5Q8N0Z6 440 aa22.02■■□□□ 1.12
PBX4-202ENST00000557978 STK32BQ9NY57 414 aa22.02■■□□□ 1.12
PBX4-202ENST00000557978 COL5A3P25940 1745 aaPredicted RBP22.02■■□□□ 1.11
PBX4-202ENST00000557978 ATP6V1AP38606 617 aa22.01■■□□□ 1.11
PBX4-202ENST00000557978 TUBGCP6Q96RT7 1819 aa22.01■■□□□ 1.11
PBX4-202ENST00000557978 CICQ96RK0 1608 aaPredicted RBP22.01■■□□□ 1.11
PBX4-202ENST00000557978 C4BP0C0L5 1744 aa22■■□□□ 1.11
PBX4-202ENST00000557978 BTBD11A6QL63 1104 aa22■■□□□ 1.11
PBX4-202ENST00000557978 KCNQ4P56696 695 aa22■■□□□ 1.11
PBX4-202ENST00000557978 SLC15A2Q16348 729 aa22■■□□□ 1.11
PBX4-202ENST00000557978 RRP7AQ9Y3A4 280 aaKnown RBP22■■□□□ 1.11
PBX4-202ENST00000557978 APAF1O14727 1248 aa21.99■■□□□ 1.11
PBX4-202ENST00000557978 PTCD1O75127 700 aaKnown RBP21.99■■□□□ 1.11
PBX4-202ENST00000557978 SLC39A6Q13433 755 aa21.99■■□□□ 1.11
PBX4-202ENST00000557978 TAF7Q15545 349 aaPredicted RBP21.99■■□□□ 1.11
PBX4-202ENST00000557978 FAM9BQ8IZU0 186 aa21.99■■□□□ 1.11
PBX4-202ENST00000557978 KDM3BQ7LBC6 1761 aa21.99■■□□□ 1.11
PBX4-202ENST00000557978 R3HDM1Q15032 1099 aaKnown RBP21.98■■□□□ 1.11
PBX4-202ENST00000557978 ZNF790Q6PG37 636 aa21.98■■□□□ 1.11
PBX4-202ENST00000557978 UBR3Q6ZT12 1888 aa21.98■■□□□ 1.11
PBX4-202ENST00000557978 TJP1Q07157 1748 aa21.98■■□□□ 1.11
PBX4-202ENST00000557978 ANO8Q9HCE9 1232 aaPredicted RBP21.97■■□□□ 1.11
PBX4-202ENST00000557978 MYH14Q7Z406 1995 aaKnown RBP21.97■■□□□ 1.11
PBX4-202ENST00000557978 KCPQ6ZWJ8 1503 aa21.96■■□□□ 1.11
PBX4-202ENST00000557978 PSDA5PKW4 1024 aaPredicted RBP21.96■■□□□ 1.11
PBX4-202ENST00000557978 AKT1S1Q96B36 256 aa21.96■■□□□ 1.11
PBX4-202ENST00000557978 VSIG10Q8N0Z9 540 aa21.95■■□□□ 1.1
PBX4-202ENST00000557978 SLC4A9Q96Q91 983 aa21.95■■□□□ 1.1
PBX4-202ENST00000557978 TRIM35Q9UPQ4 493 aa21.95■■□□□ 1.1
PBX4-202ENST00000557978 THUMPD2Q9BTF0 503 aaKnown RBP21.94■■□□□ 1.1
PBX4-202ENST00000557978 ITPK1Q13572 414 aa21.93■■□□□ 1.1
PBX4-202ENST00000557978 ZNF827Q17R98 1081 aa21.93■■□□□ 1.1
PBX4-202ENST00000557978 MIER1Q8N108 512 aa21.93■■□□□ 1.1
PBX4-202ENST00000557978 FMNL2Q96PY5 1086 aa21.93■■□□□ 1.1
PBX4-202ENST00000557978 TFCP2L1Q9NZI6 479 aa21.93■■□□□ 1.1
PBX4-202ENST00000557978 CASZ1Q86V15 1759 aa21.92■■□□□ 1.1
PBX4-202ENST00000557978 NCBP3Q53F19 620 aaKnown RBP21.92■■□□□ 1.1
PBX4-202ENST00000557978 AK7Q96M32 723 aa21.92■■□□□ 1.1
PBX4-202ENST00000557978 BABAM1Q9NWV8 329 aa21.92■■□□□ 1.1
PBX4-202ENST00000557978 LINC00116Q8NCU8 138 aa21.91■■□□□ 1.1
PBX4-202ENST00000557978 TEX13AQ9BXU3 409 aaPredicted RBP21.91■■□□□ 1.1
PBX4-202ENST00000557978 CALD1Q05682 793 aaKnown RBP21.9■■□□□ 1.1
PBX4-202ENST00000557978 ZNF496Q96IT1 587 aaPredicted RBP21.9■■□□□ 1.1
PBX4-202ENST00000557978 HEG1Q9ULI3 1381 aa21.9■■□□□ 1.1
PBX4-202ENST00000557978 RC3H1Q5TC82 1133 aaKnown RBP21.89■■□□□ 1.1
PBX4-202ENST00000557978 CNTNAP4Q9C0A0 1308 aa21.89■■□□□ 1.09
PBX4-202ENST00000557978 CCDC27Q2M243 656 aa21.89■■□□□ 1.09
PBX4-202ENST00000557978 FLAD1Q8NFF5 587 aa21.89■■□□□ 1.09
PBX4-202ENST00000557978 MIS18AQ9NYP9 233 aa21.89■■□□□ 1.09
PBX4-202ENST00000557978 LAMB4A4D0S4 1761 aa21.88■■□□□ 1.09
PBX4-202ENST00000557978 KCNQ3O43525 872 aa21.88■■□□□ 1.09
PBX4-202ENST00000557978 DNAJC10Q8IXB1 793 aa21.88■■□□□ 1.09
PBX4-202ENST00000557978 NGEFQ8N5V2 710 aa21.88■■□□□ 1.09
PBX4-202ENST00000557978 TSPYL4Q9UJ04 414 aa21.88■■□□□ 1.09
PBX4-202ENST00000557978 STARD3NLO95772 234 aa21.87■■□□□ 1.09
PBX4-202ENST00000557978 GNPATO15228 680 aa21.86■■□□□ 1.09
PBX4-202ENST00000557978 PNPLA7Q6ZV29 1317 aa21.85■■□□□ 1.09
PBX4-202ENST00000557978 SSFA2P28290 1259 aa21.85■■□□□ 1.09
PBX4-202ENST00000557978 CRKLP46109 303 aaKnown RBP21.85■■□□□ 1.09
PBX4-202ENST00000557978 CFAP44Q96MT7 982 aa21.85■■□□□ 1.09
PBX4-202ENST00000557978 RTCBQ9Y3I0 505 aaKnown RBP21.85■■□□□ 1.09
PBX4-202ENST00000557978 LAS1LQ9Y4W2 734 aaKnown RBP21.85■■□□□ 1.09
PBX4-202ENST00000557978 SNRPA1P09661 255 aaKnown RBP21.84■■□□□ 1.09
PBX4-202ENST00000557978 CYP19A1P11511 503 aaPredicted RBP21.84■■□□□ 1.09
PBX4-202ENST00000557978 SLC16A10Q8TF71 515 aa21.84■■□□□ 1.09
PBX4-202ENST00000557978 CHL1O00533 1208 aa21.83■■□□□ 1.09
PBX4-202ENST00000557978 RPS6KA4O75676 772 aa21.83■■□□□ 1.09
PBX4-202ENST00000557978 EIF4A1P60842 406 aaKnown RBP21.83■■□□□ 1.09
PBX4-202ENST00000557978 GNAI1P63096 354 aa21.83■■□□□ 1.09
PBX4-202ENST00000557978 WWC1Q8IX03 1113 aa21.83■■□□□ 1.09
PBX4-202ENST00000557978 CCDC87Q9NVE4 849 aa21.83■■□□□ 1.09
PBX4-202ENST00000557978 MSH5O43196 834 aa21.82■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms