RNA–Protein interactions for RNA: ENST00000557703.5

SHMT2-234, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 542 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-234ENST00000557703 IL17REQ8NFR9 667 aa18.03■□□□□ 0.48
SHMT2-234ENST00000557703 LGR6Q9HBX8 967 aa18.03■□□□□ 0.48
SHMT2-234ENST00000557703 TOGARAM1Q9Y4F4 1720 aa18.01■□□□□ 0.47
SHMT2-234ENST00000557703 RIPK4P57078 832 aa18.01■□□□□ 0.47
SHMT2-234ENST00000557703 CCDC184Q52MB2 194 aa18.01■□□□□ 0.47
SHMT2-234ENST00000557703 BABAM1Q9NWV8 329 aa18.01■□□□□ 0.47
SHMT2-234ENST00000557703 PALLDQ8WX93 1383 aa18.01■□□□□ 0.47
SHMT2-234ENST00000557703 PROM2Q8N271 834 aa18■□□□□ 0.47
SHMT2-234ENST00000557703 CALD1Q05682 793 aaKnown RBP17.99■□□□□ 0.47
SHMT2-234ENST00000557703 TAF7Q15545 349 aaPredicted RBP17.99■□□□□ 0.47
SHMT2-234ENST00000557703 ATG3Q9NT62 314 aa17.99■□□□□ 0.47
SHMT2-234ENST00000557703 LOC102724428A0A0B4J2F2 783 aa17.98■□□□□ 0.47
SHMT2-234ENST00000557703 SIK1P57059 783 aa17.98■□□□□ 0.47
SHMT2-234ENST00000557703 VSIG10Q8N0Z9 540 aa17.98■□□□□ 0.47
SHMT2-234ENST00000557703 CCNL1Q9UK58 526 aaPredicted RBP17.98■□□□□ 0.47
SHMT2-234ENST00000557703 ASAP1Q9ULH1 1129 aa17.98■□□□□ 0.47
SHMT2-234ENST00000557703 RREB1Q92766 1687 aa17.97■□□□□ 0.47
SHMT2-234ENST00000557703 CCDC27Q2M243 656 aa17.97■□□□□ 0.47
SHMT2-234ENST00000557703 CCDC146Q8IYE0 955 aa17.97■□□□□ 0.47
SHMT2-234ENST00000557703 LY75O60449 1722 aa17.97■□□□□ 0.47
SHMT2-234ENST00000557703 ZNF831Q5JPB2 1677 aa17.96■□□□□ 0.47
SHMT2-234ENST00000557703 VIRMAQ69YN4 1812 aaKnown RBP17.96■□□□□ 0.47
SHMT2-234ENST00000557703 TTC5Q8N0Z6 440 aa17.96■□□□□ 0.47
SHMT2-234ENST00000557703 BTBD11A6QL63 1104 aa17.95■□□□□ 0.46
SHMT2-234ENST00000557703 APAF1O14727 1248 aa17.95■□□□□ 0.46
SHMT2-234ENST00000557703 ZNF790Q6PG37 636 aa17.95■□□□□ 0.46
SHMT2-234ENST00000557703 MCM10Q7L590 875 aa17.95■□□□□ 0.46
SHMT2-234ENST00000557703 TEX13AQ9BXU3 409 aaPredicted RBP17.95■□□□□ 0.46
SHMT2-234ENST00000557703 DLG5Q8TDM6 1919 aa17.95■□□□□ 0.46
SHMT2-234ENST00000557703 FAM9BQ8IZU0 186 aa17.93■□□□□ 0.46
SHMT2-234ENST00000557703 LRRC4BQ9NT99 713 aa17.93■□□□□ 0.46
SHMT2-234ENST00000557703 STK32BQ9NY57 414 aa17.93■□□□□ 0.46
SHMT2-234ENST00000557703 ATP6V1AP38606 617 aa17.92■□□□□ 0.46
SHMT2-234ENST00000557703 RC3H1Q5TC82 1133 aaKnown RBP17.92■□□□□ 0.46
SHMT2-234ENST00000557703 FLAD1Q8NFF5 587 aa17.92■□□□□ 0.46
SHMT2-234ENST00000557703 FMNL2Q96PY5 1086 aa17.92■□□□□ 0.46
SHMT2-234ENST00000557703 TRIM35Q9UPQ4 493 aa17.92■□□□□ 0.46
SHMT2-234ENST00000557703 SIPA1L3O60292 1781 aaPredicted RBP17.91■□□□□ 0.46
SHMT2-234ENST00000557703 SLC15A2Q16348 729 aa17.91■□□□□ 0.46
SHMT2-234ENST00000557703 MIER1Q8N108 512 aa17.91■□□□□ 0.46
SHMT2-234ENST00000557703 RBM42Q9BTD8 480 aaKnown RBP17.91■□□□□ 0.46
SHMT2-234ENST00000557703 NUP188Q5SRE5 1749 aa17.91■□□□□ 0.46
SHMT2-234ENST00000557703 DCTN1Q14203 1278 aa17.9■□□□□ 0.46
SHMT2-234ENST00000557703 NEUROD2Q15784 382 aa17.9■□□□□ 0.46
SHMT2-234ENST00000557703 PTCD1O75127 700 aaKnown RBP17.89■□□□□ 0.45
SHMT2-234ENST00000557703 AKT1S1Q96B36 256 aa17.89■□□□□ 0.45
SHMT2-234ENST00000557703 PAPPAQ13219 1627 aa17.89■□□□□ 0.45
SHMT2-234ENST00000557703 CICQ96RK0 1608 aaPredicted RBP17.89■□□□□ 0.45
SHMT2-234ENST00000557703 STARD3NLO95772 234 aa17.88■□□□□ 0.45
SHMT2-234ENST00000557703 SLC39A6Q13433 755 aa17.88■□□□□ 0.45
SHMT2-234ENST00000557703 CFAP44Q96MT7 982 aa17.88■□□□□ 0.45
SHMT2-234ENST00000557703 CHMP4AQ9BY43 222 aa17.88■□□□□ 0.45
SHMT2-234ENST00000557703 RRP7AQ9Y3A4 280 aaKnown RBP17.88■□□□□ 0.45
SHMT2-234ENST00000557703 IL16Q14005 1332 aa17.88■□□□□ 0.45
SHMT2-234ENST00000557703 CHL1O00533 1208 aa17.87■□□□□ 0.45
SHMT2-234ENST00000557703 GNAI1P63096 354 aa17.87■□□□□ 0.45
SHMT2-234ENST00000557703 WDR63Q8IWG1 891 aa17.87■□□□□ 0.45
SHMT2-234ENST00000557703 CNTNAP4Q9C0A0 1308 aa17.87■□□□□ 0.45
SHMT2-234ENST00000557703 HEG1Q9ULI3 1381 aa17.87■□□□□ 0.45
SHMT2-234ENST00000557703 UBR2Q8IWV8 1755 aa17.86■□□□□ 0.45
SHMT2-234ENST00000557703 SNRPA1P09661 255 aaKnown RBP17.86■□□□□ 0.45
SHMT2-234ENST00000557703 WWC1Q8IX03 1113 aa17.86■□□□□ 0.45
SHMT2-234ENST00000557703 SLC16A10Q8TF71 515 aa17.86■□□□□ 0.45
SHMT2-234ENST00000557703 ZNF496Q96IT1 587 aaPredicted RBP17.86■□□□□ 0.45
SHMT2-234ENST00000557703 IFT57Q9NWB7 429 aa17.86■□□□□ 0.45
SHMT2-234ENST00000557703 TFCP2L1Q9NZI6 479 aa17.86■□□□□ 0.45
SHMT2-234ENST00000557703 TSPYL4Q9UJ04 414 aa17.86■□□□□ 0.45
SHMT2-234ENST00000557703 ADRA2BP18089 450 aa17.85■□□□□ 0.45
SHMT2-234ENST00000557703 SSFA2P28290 1259 aa17.85■□□□□ 0.45
SHMT2-234ENST00000557703 KCPQ6ZWJ8 1503 aa17.85■□□□□ 0.45
SHMT2-234ENST00000557703 TAF1LQ8IZX4 1826 aa17.85■□□□□ 0.45
SHMT2-234ENST00000557703 AK7Q96M32 723 aa17.85■□□□□ 0.45
SHMT2-234ENST00000557703 SLC4A9Q96Q91 983 aa17.85■□□□□ 0.45
SHMT2-234ENST00000557703 C5P01031 1676 aa17.84■□□□□ 0.45
SHMT2-234ENST00000557703 ZNF853P0CG23 659 aa17.84■□□□□ 0.45
SHMT2-234ENST00000557703 ITPK1Q13572 414 aa17.84■□□□□ 0.45
SHMT2-234ENST00000557703 ANO8Q9HCE9 1232 aaPredicted RBP17.84■□□□□ 0.45
SHMT2-234ENST00000557703 SOS1Q07889 1333 aaPredicted RBP17.83■□□□□ 0.44
SHMT2-234ENST00000557703 HOXB7P09629 217 aa17.83■□□□□ 0.44
SHMT2-234ENST00000557703 EIF4A1P60842 406 aaKnown RBP17.83■□□□□ 0.44
SHMT2-234ENST00000557703 LINC00116Q8NCU8 138 aa17.83■□□□□ 0.44
SHMT2-234ENST00000557703 THUMPD2Q9BTF0 503 aaKnown RBP17.83■□□□□ 0.44
SHMT2-234ENST00000557703 QSER1Q2KHR3 1735 aa17.82■□□□□ 0.44
SHMT2-234ENST00000557703 RPS6KA4O75676 772 aa17.82■□□□□ 0.44
SHMT2-234ENST00000557703 CYP19A1P11511 503 aaPredicted RBP17.82■□□□□ 0.44
SHMT2-234ENST00000557703 R3HDM1Q15032 1099 aaKnown RBP17.82■□□□□ 0.44
SHMT2-234ENST00000557703 RTCBQ9Y3I0 505 aaKnown RBP17.82■□□□□ 0.44
SHMT2-234ENST00000557703 C4BP0C0L5 1744 aa17.81■□□□□ 0.44
SHMT2-234ENST00000557703 KCNQ4P56696 695 aa17.81■□□□□ 0.44
SHMT2-234ENST00000557703 CCDC87Q9NVE4 849 aa17.81■□□□□ 0.44
SHMT2-234ENST00000557703 GIGYF1O75420 1035 aaPredicted RBP17.8■□□□□ 0.44
SHMT2-234ENST00000557703 CRKLP46109 303 aaKnown RBP17.8■□□□□ 0.44
SHMT2-234ENST00000557703 ZNF827Q17R98 1081 aa17.8■□□□□ 0.44
SHMT2-234ENST00000557703 DNAJC10Q8IXB1 793 aa17.8■□□□□ 0.44
SHMT2-234ENST00000557703 KDM3BQ7LBC6 1761 aa17.8■□□□□ 0.44
SHMT2-234ENST00000557703 ERBB4Q15303 1308 aa17.79■□□□□ 0.44
SHMT2-234ENST00000557703 COL5A3P25940 1745 aaPredicted RBP17.79■□□□□ 0.44
SHMT2-234ENST00000557703 KCNQ3O43525 872 aa17.79■□□□□ 0.44
SHMT2-234ENST00000557703 TRAPPC3LQ5T215 181 aa17.79■□□□□ 0.44
SHMT2-234ENST00000557703 MIS18AQ9NYP9 233 aa17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 88.6 ms