RNA–Protein interactions for RNA: ENST00000556399.5

ARHGEF40-207, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 4,902 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-207ENST00000556399 ME1P48163 572 aa17.82■□□□□ 0.44
ARHGEF40-207ENST00000556399 PDIA4P13667 645 aaKnown RBP17.82■□□□□ 0.44
ARHGEF40-207ENST00000556399 AKAP17AQ02040 695 aaKnown RBP17.82■□□□□ 0.44
ARHGEF40-207ENST00000556399 HS1BP3Q53T59 392 aa17.82■□□□□ 0.44
ARHGEF40-207ENST00000556399 TRIM35Q9UPQ4 493 aa17.82■□□□□ 0.44
ARHGEF40-207ENST00000556399 UVSSAQ2YD98 709 aa17.82■□□□□ 0.44
ARHGEF40-207ENST00000556399 NFXL1Q6ZNB6 911 aa17.82■□□□□ 0.44
ARHGEF40-207ENST00000556399 USP26Q9BXU7 913 aa17.82■□□□□ 0.44
ARHGEF40-207ENST00000556399 SH2B1Q9NRF2 756 aaPredicted RBP17.82■□□□□ 0.44
ARHGEF40-207ENST00000556399 HCLS1P14317 486 aaPredicted RBP17.81■□□□□ 0.44
ARHGEF40-207ENST00000556399 STK38Q15208 465 aa17.81■□□□□ 0.44
ARHGEF40-207ENST00000556399 POLKQ9UBT6 870 aa17.81■□□□□ 0.44
ARHGEF40-207ENST00000556399 RAPGEF4Q8WZA2 1011 aa17.81■□□□□ 0.44
ARHGEF40-207ENST00000556399 A0A1W2PP64 1363 aa17.81■□□□□ 0.44
ARHGEF40-207ENST00000556399 FILIP1Q7Z7B0 1213 aa17.81■□□□□ 0.44
ARHGEF40-207ENST00000556399 PHACTR3Q96KR7 559 aa17.81■□□□□ 0.44
ARHGEF40-207ENST00000556399 FBXO31Q5XUX0 539 aaPredicted RBP17.81■□□□□ 0.44
ARHGEF40-207ENST00000556399 OLFM4Q6UX06 510 aa17.81■□□□□ 0.44
ARHGEF40-207ENST00000556399 ESYT1Q9BSJ8 1104 aa17.81■□□□□ 0.44
ARHGEF40-207ENST00000556399 CFAP45Q9UL16 551 aa17.81■□□□□ 0.44
ARHGEF40-207ENST00000556399 SPG7Q9UQ90 795 aa17.81■□□□□ 0.44
ARHGEF40-207ENST00000556399 ZMYM3Q14202 1370 aa17.8■□□□□ 0.44
ARHGEF40-207ENST00000556399 ABCC2Q92887 1545 aa17.8■□□□□ 0.44
ARHGEF40-207ENST00000556399 ZNF830Q96NB3 372 aaPredicted RBP17.8■□□□□ 0.44
ARHGEF40-207ENST00000556399 UBE2HP62256 183 aa17.8■□□□□ 0.44
ARHGEF40-207ENST00000556399 ZNF530Q6P9A1 599 aaPredicted RBP17.8■□□□□ 0.44
ARHGEF40-207ENST00000556399 TSR1Q2NL82 804 aaKnown RBP17.8■□□□□ 0.44
ARHGEF40-207ENST00000556399 PDILTQ8N807 584 aa17.8■□□□□ 0.44
ARHGEF40-207ENST00000556399 A0A0U1RQG5 324 aaPredicted RBP17.79■□□□□ 0.44
ARHGEF40-207ENST00000556399 CCDC66A2RUB6 948 aa17.79■□□□□ 0.44
ARHGEF40-207ENST00000556399 CEP85Q6P2H3 762 aa17.79■□□□□ 0.44
ARHGEF40-207ENST00000556399 USP48Q86UV5 1035 aa17.79■□□□□ 0.44
ARHGEF40-207ENST00000556399 SCAND2PQ9GZW5 306 aaPredicted RBP17.79■□□□□ 0.44
ARHGEF40-207ENST00000556399 GJB2P29033 226 aa17.78■□□□□ 0.44
ARHGEF40-207ENST00000556399 CKAP2LQ8IYA6 745 aa17.78■□□□□ 0.44
ARHGEF40-207ENST00000556399 DDX11Q96FC9 970 aa17.78■□□□□ 0.44
ARHGEF40-207ENST00000556399 RBSNQ9H1K0 784 aa17.78■□□□□ 0.44
ARHGEF40-207ENST00000556399 EIF4G3O43432 1585 aaKnown RBP17.78■□□□□ 0.44
ARHGEF40-207ENST00000556399 PTPRTO14522 1441 aa17.78■□□□□ 0.44
ARHGEF40-207ENST00000556399 PRIMPOLQ96LW4 560 aa17.77■□□□□ 0.44
ARHGEF40-207ENST00000556399 ANAPC15P60006 121 aa17.77■□□□□ 0.44
ARHGEF40-207ENST00000556399 CEP57L1Q8IYX8 460 aa17.77■□□□□ 0.44
ARHGEF40-207ENST00000556399 ANTXR1Q9H6X2 564 aa17.77■□□□□ 0.44
ARHGEF40-207ENST00000556399 KRT32Q14532 448 aa17.77■□□□□ 0.44
ARHGEF40-207ENST00000556399 TAF7Q15545 349 aaPredicted RBP17.77■□□□□ 0.44
ARHGEF40-207ENST00000556399 BTBD11A6QL63 1104 aa17.76■□□□□ 0.43
ARHGEF40-207ENST00000556399 ZSCAN22P10073 491 aaPredicted RBP17.76■□□□□ 0.43
ARHGEF40-207ENST00000556399 GIMAP6Q6P9H5 292 aa17.76■□□□□ 0.43
ARHGEF40-207ENST00000556399 SLC26A8Q96RN1 970 aa17.76■□□□□ 0.43
ARHGEF40-207ENST00000556399 CNPY2Q9Y2B0 182 aa17.76■□□□□ 0.43
ARHGEF40-207ENST00000556399 ABCC10Q5T3U5 1492 aa17.76■□□□□ 0.43
ARHGEF40-207ENST00000556399 SAFBQ15424 915 aaKnown RBP eCLIP17.76■□□□□ 0.43
ARHGEF40-207ENST00000556399 KDM4AO75164 1064 aa17.76■□□□□ 0.43
ARHGEF40-207ENST00000556399 NLRP2Q9NX02 1062 aa17.76■□□□□ 0.43
ARHGEF40-207ENST00000556399 ARHGEF5Q12774 1597 aa17.76■□□□□ 0.43
ARHGEF40-207ENST00000556399 WDR7Q9Y4E6 1490 aa17.76■□□□□ 0.43
ARHGEF40-207ENST00000556399 CCP110O43303 1012 aa17.76■□□□□ 0.43
ARHGEF40-207ENST00000556399 NOLC1Q14978 699 aaKnown RBP eCLIP17.75■□□□□ 0.43
ARHGEF40-207ENST00000556399 CEP170Q5SW79 1584 aa17.75■□□□□ 0.43
ARHGEF40-207ENST00000556399 DHX16O60231 1041 aaKnown RBP17.75■□□□□ 0.43
ARHGEF40-207ENST00000556399 KRT24Q2M2I5 525 aa17.75■□□□□ 0.43
ARHGEF40-207ENST00000556399 NCBP3Q53F19 620 aaKnown RBP17.75■□□□□ 0.43
ARHGEF40-207ENST00000556399 OTUD7AQ8TE49 926 aaPredicted RBP17.74■□□□□ 0.43
ARHGEF40-207ENST00000556399 PPP4R3BQ5MIZ7 849 aa17.74■□□□□ 0.43
ARHGEF40-207ENST00000556399 PPP1R42Q7Z4L9 355 aa17.74■□□□□ 0.43
ARHGEF40-207ENST00000556399 C16orf45Q96MC5 204 aaPredicted RBP17.74■□□□□ 0.43
ARHGEF40-207ENST00000556399 NOL7Q9UMY1 257 aaKnown RBP17.74■□□□□ 0.43
ARHGEF40-207ENST00000556399 KDM5AP29375 1690 aaKnown RBP17.74■□□□□ 0.43
ARHGEF40-207ENST00000556399 FSD2A1L4K1 749 aa17.74■□□□□ 0.43
ARHGEF40-207ENST00000556399 ANKRD20A12PQ8NF67 263 aa17.74■□□□□ 0.43
ARHGEF40-207ENST00000556399 BOLA2Q9H3K6 86 aa17.74■□□□□ 0.43
ARHGEF40-207ENST00000556399 CLIP2Q9UDT6 1046 aa17.73■□□□□ 0.43
ARHGEF40-207ENST00000556399 SERPINC1P01008 464 aa17.73■□□□□ 0.43
ARHGEF40-207ENST00000556399 ZNF445P59923 1031 aa17.73■□□□□ 0.43
ARHGEF40-207ENST00000556399 TARBP1Q13395 1621 aaKnown RBP17.73■□□□□ 0.43
ARHGEF40-207ENST00000556399 DNAAF4Q8WXU2 420 aa17.73■□□□□ 0.43
ARHGEF40-207ENST00000556399 TTC12Q9H892 705 aaPredicted RBP17.73■□□□□ 0.43
ARHGEF40-207ENST00000556399 TNNT1P13805 278 aa17.73■□□□□ 0.43
ARHGEF40-207ENST00000556399 MYL6BP14649 208 aa17.73■□□□□ 0.43
ARHGEF40-207ENST00000556399 TFIP11Q9UBB9 837 aaKnown RBP17.73■□□□□ 0.43
ARHGEF40-207ENST00000556399 ZRANB1Q9UGI0 708 aa17.73■□□□□ 0.43
ARHGEF40-207ENST00000556399 PTPN14Q15678 1187 aa17.72■□□□□ 0.43
ARHGEF40-207ENST00000556399 ZFYVE9O95405 1425 aa17.72■□□□□ 0.43
ARHGEF40-207ENST00000556399 TTC21BQ7Z4L5 1316 aa17.72■□□□□ 0.43
ARHGEF40-207ENST00000556399 SYNMO15061 1565 aa17.72■□□□□ 0.43
ARHGEF40-207ENST00000556399 PRDM15P57071 1507 aaPredicted RBP17.72■□□□□ 0.43
ARHGEF40-207ENST00000556399 KDM5DQ9BY66 1539 aa17.72■□□□□ 0.43
ARHGEF40-207ENST00000556399 DHX8Q14562 1220 aaKnown RBP17.72■□□□□ 0.43
ARHGEF40-207ENST00000556399 DDX19AQ9NUU7 478 aaKnown RBP17.72■□□□□ 0.43
ARHGEF40-207ENST00000556399 RHPN1Q8TCX5 695 aa17.71■□□□□ 0.43
ARHGEF40-207ENST00000556399 CCDC8Q9H0W5 538 aaPredicted RBP17.71■□□□□ 0.43
ARHGEF40-207ENST00000556399 ECHDC1Q9NTX5 307 aa17.71■□□□□ 0.43
ARHGEF40-207ENST00000556399 USP19O94966 1318 aa17.7■□□□□ 0.42
ARHGEF40-207ENST00000556399 ERICH2A1L162 156 aa17.7■□□□□ 0.42
ARHGEF40-207ENST00000556399 IPO7O95373 1038 aaKnown RBP17.7■□□□□ 0.42
ARHGEF40-207ENST00000556399 HSP90AB2PQ58FF8 381 aa17.7■□□□□ 0.42
ARHGEF40-207ENST00000556399 GAS2L3Q86XJ1 694 aa17.7■□□□□ 0.42
ARHGEF40-207ENST00000556399 NOC3LQ8WTT2 800 aaKnown RBP17.7■□□□□ 0.42
ARHGEF40-207ENST00000556399 ATP8B2P98198 1209 aa17.7■□□□□ 0.42
ARHGEF40-207ENST00000556399 INTS4Q96HW7 963 aaKnown RBP17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms