RNA–Protein interactions for RNA: ENST00000556288.5

ATXN3-238, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 901 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-238ENST00000556288 DZIP3Q86Y13 1208 aaKnown RBP7.14□□□□□ -1.27
ATXN3-238ENST00000556288 C1QTNF2Q9BXJ5 285 aa7.14□□□□□ -1.27
ATXN3-238ENST00000556288 EHBP1L1Q8N3D4 1523 aa7.13□□□□□ -1.27
ATXN3-238ENST00000556288 ZNF644Q9H582 1327 aaPredicted RBP7.13□□□□□ -1.27
ATXN3-238ENST00000556288 AXIN1O15169 862 aa7.13□□□□□ -1.27
ATXN3-238ENST00000556288 PROSER2Q86WR7 435 aaPredicted RBP7.13□□□□□ -1.27
ATXN3-238ENST00000556288 SLC10A4Q96EP9 437 aa7.13□□□□□ -1.27
ATXN3-238ENST00000556288 ZMYND15Q9H091 742 aa7.13□□□□□ -1.27
ATXN3-238ENST00000556288 PCDHB9Q9Y5E1 797 aa7.13□□□□□ -1.27
ATXN3-238ENST00000556288 TLL2Q9Y6L7 1015 aa7.13□□□□□ -1.27
ATXN3-238ENST00000556288 GPATCH8Q9UKJ3 1502 aaKnown RBP7.12□□□□□ -1.27
ATXN3-238ENST00000556288 LRRC9Q6ZRR7 1453 aa7.12□□□□□ -1.27
ATXN3-238ENST00000556288 TERTO14746 1132 aaKnown RBP7.12□□□□□ -1.27
ATXN3-238ENST00000556288 EIF4G2P78344 907 aaKnown RBP eCLIP7.12□□□□□ -1.27
ATXN3-238ENST00000556288 VASH1Q7L8A9 365 aaPredicted RBP7.12□□□□□ -1.27
ATXN3-238ENST00000556288 TRMT44Q8IYL2 757 aaKnown RBP7.12□□□□□ -1.27
ATXN3-238ENST00000556288 TOR4AQ9NXH8 423 aa7.12□□□□□ -1.27
ATXN3-238ENST00000556288 NCOA2Q15596 1464 aa7.11□□□□□ -1.27
ATXN3-238ENST00000556288 J3QL48 77 aa7.11□□□□□ -1.27
ATXN3-238ENST00000556288 FAM50AQ14320 339 aaKnown RBP7.11□□□□□ -1.27
ATXN3-238ENST00000556288 MPNDQ8N594 471 aa7.11□□□□□ -1.27
ATXN3-238ENST00000556288 CDK15Q96Q40 435 aa7.11□□□□□ -1.27
ATXN3-238ENST00000556288 ESF1Q9H501 851 aaKnown RBP7.11□□□□□ -1.27
ATXN3-238ENST00000556288 WASF2Q9Y6W5 498 aa7.11□□□□□ -1.27
ATXN3-238ENST00000556288 SAMD9LQ8IVG5 1584 aa7.11□□□□□ -1.27
ATXN3-238ENST00000556288 SPAG9O60271 1321 aaKnown RBP7.1□□□□□ -1.27
ATXN3-238ENST00000556288 TSPY4P0CV99 314 aa7.1□□□□□ -1.27
ATXN3-238ENST00000556288 TSPY10P0CW01 314 aa7.1□□□□□ -1.27
ATXN3-238ENST00000556288 LORP23490 312 aaPredicted RBP7.1□□□□□ -1.27
ATXN3-238ENST00000556288 ITGAEP38570 1179 aa7.1□□□□□ -1.27
ATXN3-238ENST00000556288 FNBP4Q8N3X1 1017 aaPredicted RBP7.1□□□□□ -1.27
ATXN3-238ENST00000556288 ZNF592Q92610 1267 aa7.1□□□□□ -1.27
ATXN3-238ENST00000556288 CDV3Q9UKY7 258 aaKnown RBP7.1□□□□□ -1.27
ATXN3-238ENST00000556288 FRMPD1Q5SYB0 1578 aa7.1□□□□□ -1.27
ATXN3-238ENST00000556288 TRAK2O60296 914 aa7.09□□□□□ -1.27
ATXN3-238ENST00000556288 ADH1CP00326 375 aa7.09□□□□□ -1.27
ATXN3-238ENST00000556288 SMPD1P17405 629 aa7.09□□□□□ -1.27
ATXN3-238ENST00000556288 SMCPP49901 116 aaPredicted RBP7.09□□□□□ -1.27
ATXN3-238ENST00000556288 MCCD1P59942 119 aaPredicted RBP7.09□□□□□ -1.27
ATXN3-238ENST00000556288 SEMA3FQ13275 785 aa7.09□□□□□ -1.27
ATXN3-238ENST00000556288 CTC1Q2NKJ3 1217 aa7.09□□□□□ -1.27
ATXN3-238ENST00000556288 ERICH6Q7L0X2 663 aa7.09□□□□□ -1.27
ATXN3-238ENST00000556288 KCTD15Q96SI1 283 aaPredicted RBP7.09□□□□□ -1.27
ATXN3-238ENST00000556288 MAP4K5Q9Y4K4 846 aa7.09□□□□□ -1.27
ATXN3-238ENST00000556288 ZFYVE16Q7Z3T8 1539 aa7.09□□□□□ -1.27
ATXN3-238ENST00000556288 SYCP2Q9BX26 1530 aa7.09□□□□□ -1.27
ATXN3-238ENST00000556288 TRAPPC8Q9Y2L5 1435 aa7.09□□□□□ -1.28
ATXN3-238ENST00000556288 FER1L4A9Z1Z3 1794 aa7.08□□□□□ -1.28
ATXN3-238ENST00000556288 KIDINS220Q9ULH0 1771 aa7.08□□□□□ -1.28
ATXN3-238ENST00000556288 ARHGEF12Q9NZN5 1544 aa7.08□□□□□ -1.28
ATXN3-238ENST00000556288 FAM181BA6NEQ2 426 aa7.08□□□□□ -1.28
ATXN3-238ENST00000556288 POM121CA8CG34 1229 aa7.08□□□□□ -1.28
ATXN3-238ENST00000556288 GRM5P41594 1212 aa7.08□□□□□ -1.28
ATXN3-238ENST00000556288 NBPF20Q3BBV1 942 aa7.08□□□□□ -1.28
ATXN3-238ENST00000556288 CHIC2Q9UKJ5 165 aa7.08□□□□□ -1.28
ATXN3-238ENST00000556288 ZNF518AQ6AHZ1 1483 aa7.08□□□□□ -1.28
ATXN3-238ENST00000556288 RIMS1Q86UR5 1692 aaKnown RBP7.08□□□□□ -1.28
ATXN3-238ENST00000556288 YEATS2Q9ULM3 1422 aa7.08□□□□□ -1.28
ATXN3-238ENST00000556288 HECW2Q9P2P5 1572 aa7.08□□□□□ -1.28
ATXN3-238ENST00000556288 ABCC1P33527 1531 aa7.07□□□□□ -1.28
ATXN3-238ENST00000556288 MAP3K1Q13233 1512 aa7.07□□□□□ -1.28
ATXN3-238ENST00000556288 ATP10AO60312 1499 aa7.07□□□□□ -1.28
ATXN3-238ENST00000556288 PLEKHH2Q8IVE3 1493 aa7.07□□□□□ -1.28
ATXN3-238ENST00000556288 GIGYF1O75420 1035 aaPredicted RBP7.07□□□□□ -1.28
ATXN3-238ENST00000556288 SNRPBP14678 240 aaKnown RBP7.07□□□□□ -1.28
ATXN3-238ENST00000556288 FSHRP23945 695 aa7.07□□□□□ -1.28
ATXN3-238ENST00000556288 SOX11P35716 441 aa7.07□□□□□ -1.28
ATXN3-238ENST00000556288 RAB15P59190 212 aa7.07□□□□□ -1.28
ATXN3-238ENST00000556288 NR5A1Q13285 461 aa7.07□□□□□ -1.28
ATXN3-238ENST00000556288 CEP126Q9P2H0 1117 aa7.07□□□□□ -1.28
ATXN3-238ENST00000556288 POGZQ7Z3K3 1410 aa7.07□□□□□ -1.28
ATXN3-238ENST00000556288 BCORL1Q5H9F3 1711 aa7.07□□□□□ -1.28
ATXN3-238ENST00000556288 ADGBQ8N7X0 1667 aa7.06□□□□□ -1.28
ATXN3-238ENST00000556288 CAMSAP2Q08AD1 1489 aa7.06□□□□□ -1.28
ATXN3-238ENST00000556288 PTPN23Q9H3S7 1636 aa7.06□□□□□ -1.28
ATXN3-238ENST00000556288 HDGFL1Q5TGJ6 251 aa7.06□□□□□ -1.28
ATXN3-238ENST00000556288 GGT6Q6P531 493 aa7.06□□□□□ -1.28
ATXN3-238ENST00000556288 SIGLEC1Q9BZZ2 1709 aa7.06□□□□□ -1.28
ATXN3-238ENST00000556288 ABCA6Q8N139 1617 aa7.05□□□□□ -1.28
ATXN3-238ENST00000556288 NNTQ13423 1086 aa7.05□□□□□ -1.28
ATXN3-238ENST00000556288 HPS1Q92902 700 aa7.05□□□□□ -1.28
ATXN3-238ENST00000556288 ALG2Q9H553 416 aa7.05□□□□□ -1.28
ATXN3-238ENST00000556288 MAGI2Q86UL8 1455 aa7.04□□□□□ -1.28
ATXN3-238ENST00000556288 SETD1BQ9UPS6 1966 aaKnown RBP7.04□□□□□ -1.28
ATXN3-238ENST00000556288 MYOM3Q5VTT5 1437 aa7.04□□□□□ -1.28
ATXN3-238ENST00000556288 NR3C2P08235 984 aa7.04□□□□□ -1.28
ATXN3-238ENST00000556288 CEBPAP49715 358 aaPredicted RBP7.04□□□□□ -1.28
ATXN3-238ENST00000556288 SLFNL1Q499Z3 407 aa7.04□□□□□ -1.28
ATXN3-238ENST00000556288 RRP7BPQ9NSQ0 103 aa7.04□□□□□ -1.28
ATXN3-238ENST00000556288 TIMELESSQ9UNS1 1208 aa7.04□□□□□ -1.28
ATXN3-238ENST00000556288 ATP7AQ04656 1500 aa7.04□□□□□ -1.28
ATXN3-238ENST00000556288 ZMYM4Q5VZL5 1548 aa7.04□□□□□ -1.28
ATXN3-238ENST00000556288 ARHGEF40Q8TER5 1519 aa7.04□□□□□ -1.28
ATXN3-238ENST00000556288 MADDQ8WXG6 1647 aa7.04□□□□□ -1.28
ATXN3-238ENST00000556288 DIP2CQ9Y2E4 1556 aa7.03□□□□□ -1.28
ATXN3-238ENST00000556288 C9orf84Q5VXU9 1444 aa7.03□□□□□ -1.28
ATXN3-238ENST00000556288 ESPNB1AK53 854 aa7.03□□□□□ -1.28
ATXN3-238ENST00000556288 KIF3BO15066 747 aa7.03□□□□□ -1.28
ATXN3-238ENST00000556288 DHX9Q08211 1270 aaKnown RBP7.03□□□□□ -1.28
ATXN3-238ENST00000556288 INTS6LQ5JSJ4 861 aaKnown RBP7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms