RNA–Protein interactions for RNA: ENST00000555880.5

TDP1-213, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5 BASIC

Gene TDP1, Length 1,894 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-213ENST00000555880 FAM163AQ96GL9 167 aaPredicted RBP8.68□□□□□ -1.02
TDP1-213ENST00000555880 PTPRCP08575 1304 aa8.68□□□□□ -1.02
TDP1-213ENST00000555880 FMN2Q9NZ56 1722 aa8.68□□□□□ -1.02
TDP1-213ENST00000555880 OVOS2A0A0J9YW53 1432 aa8.67□□□□□ -1.02
TDP1-213ENST00000555880 ACEP12821 1306 aa8.67□□□□□ -1.02
TDP1-213ENST00000555880 MKRN3Q13064 507 aaKnown RBP8.67□□□□□ -1.02
TDP1-213ENST00000555880 OVOS2Q6IE36 1432 aa8.67□□□□□ -1.02
TDP1-213ENST00000555880 RPAP2Q8IXW5 612 aaPredicted RBP8.67□□□□□ -1.02
TDP1-213ENST00000555880 GZF1Q9H116 711 aaPredicted RBP8.67□□□□□ -1.02
TDP1-213ENST00000555880 PRR36Q9H6K5 1346 aa8.67□□□□□ -1.02
TDP1-213ENST00000555880 DCTPP1Q9H773 170 aa8.67□□□□□ -1.02
TDP1-213ENST00000555880 ROBO2Q9HCK4 1378 aa8.67□□□□□ -1.02
TDP1-213ENST00000555880 USP6P35125 1406 aa8.66□□□□□ -1.02
TDP1-213ENST00000555880 PLEKHG1Q9ULL1 1385 aa8.66□□□□□ -1.02
TDP1-213ENST00000555880 K7ELQ4 463 aaPredicted RBP8.66□□□□□ -1.02
TDP1-213ENST00000555880 CHL1O00533 1208 aa8.66□□□□□ -1.02
TDP1-213ENST00000555880 SKOR2Q2VWA4 1001 aaPredicted RBP8.66□□□□□ -1.02
TDP1-213ENST00000555880 AEBP1Q8IUX7 1158 aa8.66□□□□□ -1.02
TDP1-213ENST00000555880 SLAIN1Q8ND83 568 aa8.66□□□□□ -1.02
TDP1-213ENST00000555880 ISY1Q9ULR0 285 aaKnown RBP8.66□□□□□ -1.02
TDP1-213ENST00000555880 RGPD1P0DJD0 1748 aa8.66□□□□□ -1.02
TDP1-213ENST00000555880 SIPA1L2Q9P2F8 1722 aaPredicted RBP8.66□□□□□ -1.02
TDP1-213ENST00000555880 ARHGEF10O15013 1369 aa8.66□□□□□ -1.02
TDP1-213ENST00000555880 PLEKHG3A1L390 1219 aa8.66□□□□□ -1.02
TDP1-213ENST00000555880 HMMRO75330 724 aa8.66□□□□□ -1.02
TDP1-213ENST00000555880 DDIT3P35638 169 aa8.66□□□□□ -1.02
TDP1-213ENST00000555880 ANKRD44Q8N8A2 993 aa8.66□□□□□ -1.02
TDP1-213ENST00000555880 RTF1Q92541 710 aaKnown RBP8.66□□□□□ -1.02
TDP1-213ENST00000555880 PEAK1Q9H792 1746 aa8.65□□□□□ -1.02
TDP1-213ENST00000555880 FSD2A1L4K1 749 aa8.65□□□□□ -1.02
TDP1-213ENST00000555880 GOLGA6L22H0YM25 854 aa8.65□□□□□ -1.02
TDP1-213ENST00000555880 LTKP29376 864 aa8.65□□□□□ -1.02
TDP1-213ENST00000555880 RABEP1Q15276 862 aa8.65□□□□□ -1.02
TDP1-213ENST00000555880 TTC22Q5TAA0 569 aa8.65□□□□□ -1.02
TDP1-213ENST00000555880 MCM10Q7L590 875 aa8.65□□□□□ -1.02
TDP1-213ENST00000555880 PLEKHM2Q8IWE5 1019 aa8.65□□□□□ -1.02
TDP1-213ENST00000555880 ARXQ96QS3 562 aa8.65□□□□□ -1.02
TDP1-213ENST00000555880 ADAMTS13Q76LX8 1427 aa8.65□□□□□ -1.03
TDP1-213ENST00000555880 ATP10DQ9P241 1426 aa8.65□□□□□ -1.03
TDP1-213ENST00000555880 MSH6P52701 1360 aa8.64□□□□□ -1.03
TDP1-213ENST00000555880 TTC21AQ8NDW8 1320 aa8.64□□□□□ -1.03
TDP1-213ENST00000555880 MRE11P49959 708 aa8.64□□□□□ -1.03
TDP1-213ENST00000555880 RAB3GAP1Q15042 981 aa8.64□□□□□ -1.03
TDP1-213ENST00000555880 TNPO1Q92973 898 aaKnown RBP8.64□□□□□ -1.03
TDP1-213ENST00000555880 KIF2CQ99661 725 aa8.64□□□□□ -1.03
TDP1-213ENST00000555880 RGS12O14924 1447 aa8.64□□□□□ -1.03
TDP1-213ENST00000555880 USP31Q70CQ4 1352 aa8.64□□□□□ -1.03
TDP1-213ENST00000555880 GSPT1P15170 499 aaKnown RBP8.64□□□□□ -1.03
TDP1-213ENST00000555880 HSP90AB2PQ58FF8 381 aa8.64□□□□□ -1.03
TDP1-213ENST00000555880 CEP85Q6P2H3 762 aa8.64□□□□□ -1.03
TDP1-213ENST00000555880 SLC26A8Q96RN1 970 aa8.64□□□□□ -1.03
TDP1-213ENST00000555880 RTL1A6NKG5 1358 aa8.63□□□□□ -1.03
TDP1-213ENST00000555880 FLT4P35916 1363 aa8.63□□□□□ -1.03
TDP1-213ENST00000555880 NUTM2FA1L443 756 aa8.63□□□□□ -1.03
TDP1-213ENST00000555880 XRCC6P12956 609 aaKnown RBP eCLIP8.63□□□□□ -1.03
TDP1-213ENST00000555880 CCT4P50991 539 aaKnown RBP8.63□□□□□ -1.03
TDP1-213ENST00000555880 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.63□□□□□ -1.034e-6■■■□□ 19.2
TDP1-213ENST00000555880 TBX22Q9Y458 520 aa8.63□□□□□ -1.03
TDP1-213ENST00000555880 SBNO1A3KN83 1393 aa8.63□□□□□ -1.03
TDP1-213ENST00000555880 SOX12O15370 315 aa8.62□□□□□ -1.03
TDP1-213ENST00000555880 REC8O95072 547 aa8.62□□□□□ -1.03
TDP1-213ENST00000555880 KRT24Q2M2I5 525 aa8.62□□□□□ -1.03
TDP1-213ENST00000555880 STK31Q9BXU1 1019 aa8.62□□□□□ -1.03
TDP1-213ENST00000555880 TSPYL4Q9UJ04 414 aa8.62□□□□□ -1.03
TDP1-213ENST00000555880 CRB1P82279 1406 aa8.62□□□□□ -1.03
TDP1-213ENST00000555880 FER1L4A9Z1Z3 1794 aa8.62□□□□□ -1.03
TDP1-213ENST00000555880 APBB1O00213 710 aa8.62□□□□□ -1.03
TDP1-213ENST00000555880 AMPHP49418 695 aa8.62□□□□□ -1.03
TDP1-213ENST00000555880 NGDNQ8NEJ9 315 aaKnown RBP8.62□□□□□ -1.03
TDP1-213ENST00000555880 GAS2L2Q8NHY3 880 aa8.62□□□□□ -1.03
TDP1-213ENST00000555880 AMOTL2Q9Y2J4 779 aa8.62□□□□□ -1.03
TDP1-213ENST00000555880 RIMS1Q86UR5 1692 aaKnown RBP8.61□□□□□ -1.03
TDP1-213ENST00000555880 MAP3K19Q56UN5 1328 aa8.61□□□□□ -1.03
TDP1-213ENST00000555880 ST18O60284 1047 aa8.61□□□□□ -1.03
TDP1-213ENST00000555880 CD2BP2O95400 341 aaKnown RBP8.61□□□□□ -1.03
TDP1-213ENST00000555880 ANKLE2Q86XL3 938 aa8.61□□□□□ -1.03
TDP1-213ENST00000555880 RNF25Q96BH1 459 aaPredicted RBP8.61□□□□□ -1.03
TDP1-213ENST00000555880 MEIS3Q99687 375 aa8.61□□□□□ -1.03
TDP1-213ENST00000555880 GRPEL1Q9HAV7 217 aa8.61□□□□□ -1.03
TDP1-213ENST00000555880 CACNA1FO60840 1977 aa8.61□□□□□ -1.03
TDP1-213ENST00000555880 SSH2Q76I76 1423 aa8.6□□□□□ -1.03
TDP1-213ENST00000555880 SDSP20132 328 aa8.6□□□□□ -1.03
TDP1-213ENST00000555880 NUCB2P80303 420 aa8.6□□□□□ -1.03
TDP1-213ENST00000555880 SLC4A10Q6U841 1118 aa8.6□□□□□ -1.03
TDP1-213ENST00000555880 C16orf71Q8IYS4 520 aaPredicted RBP8.6□□□□□ -1.03
TDP1-213ENST00000555880 USP26Q9BXU7 913 aa8.6□□□□□ -1.03
TDP1-213ENST00000555880 SLIT1O75093 1534 aa8.6□□□□□ -1.03
TDP1-213ENST00000555880 KDRP35968 1356 aa8.6□□□□□ -1.03
TDP1-213ENST00000555880 DIP2AQ14689 1571 aa8.6□□□□□ -1.03
TDP1-213ENST00000555880 HTATSF1O43719 755 aaKnown RBP8.6□□□□□ -1.03
TDP1-213ENST00000555880 GNAI2P04899 355 aa8.6□□□□□ -1.03
TDP1-213ENST00000555880 MTHFSDQ2M296 383 aaKnown RBP8.6□□□□□ -1.03
TDP1-213ENST00000555880 ARHGAP23Q9P227 1491 aa8.59□□□□□ -1.03
TDP1-213ENST00000555880 FAM208AQ9UK61 1670 aaKnown RBP8.59□□□□□ -1.03
TDP1-213ENST00000555880 SOS1Q07889 1333 aaPredicted RBP8.59□□□□□ -1.03
TDP1-213ENST00000555880 ERC2O15083 957 aa8.59□□□□□ -1.03
TDP1-213ENST00000555880 SMARCA5O60264 1052 aaPredicted RBP8.59□□□□□ -1.03
TDP1-213ENST00000555880 GNAI3P08754 354 aa8.59□□□□□ -1.03
TDP1-213ENST00000555880 CCDC30Q5VVM6 783 aa8.59□□□□□ -1.03
TDP1-213ENST00000555880 DPY19L2Q6NUT2 758 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms