RNA–Protein interactions for RNA: ENST00000555353.5

FOXN3-209, Transcript of forkhead box N3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FOXN3, Length 1,595 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-209ENST00000555353 KCNQ4P56696 695 aa27.16■■□□□ 1.94
FOXN3-209ENST00000555353 ANO8Q9HCE9 1232 aaPredicted RBP27.16■■□□□ 1.94
FOXN3-209ENST00000555353 STK32BQ9NY57 414 aa27.16■■□□□ 1.94
FOXN3-209ENST00000555353 MRC1P22897 1456 aa27.15■■□□□ 1.94
FOXN3-209ENST00000555353 RTF1Q92541 710 aaKnown RBP27.14■■□□□ 1.94
FOXN3-209ENST00000555353 PAPPAQ13219 1627 aa27.14■■□□□ 1.94
FOXN3-209ENST00000555353 DLG5Q8TDM6 1919 aa27.14■■□□□ 1.93
FOXN3-209ENST00000555353 HMGB2P26583 209 aaKnown RBP27.14■■□□□ 1.93
FOXN3-209ENST00000555353 TEFQ10587 303 aa27.13■■□□□ 1.93
FOXN3-209ENST00000555353 IL17REQ8NFR9 667 aa27.13■■□□□ 1.93
FOXN3-209ENST00000555353 LOC102724428A0A0B4J2F2 783 aa27.12■■□□□ 1.93
FOXN3-209ENST00000555353 SIK1P57059 783 aa27.12■■□□□ 1.93
FOXN3-209ENST00000555353 ADAMTS8Q9UP79 889 aa27.12■■□□□ 1.93
FOXN3-209ENST00000555353 C5P01031 1676 aa27.11■■□□□ 1.93
FOXN3-209ENST00000555353 SLC15A2Q16348 729 aa27.11■■□□□ 1.93
FOXN3-209ENST00000555353 MRS2Q9HD23 443 aa27.11■■□□□ 1.93
FOXN3-209ENST00000555353 TAF1LQ8IZX4 1826 aa27.11■■□□□ 1.93
FOXN3-209ENST00000555353 NFE2L2Q16236 605 aa27.1■■□□□ 1.93
FOXN3-209ENST00000555353 HTATSF1O43719 755 aaKnown RBP27.09■■□□□ 1.93
FOXN3-209ENST00000555353 CCDC184Q52MB2 194 aa27.09■■□□□ 1.93
FOXN3-209ENST00000555353 CCDC146Q8IYE0 955 aa27.09■■□□□ 1.93
FOXN3-209ENST00000555353 RBM42Q9BTD8 480 aaKnown RBP27.09■■□□□ 1.93
FOXN3-209ENST00000555353 CEMIPQ8WUJ3 1361 aa27.09■■□□□ 1.93
FOXN3-209ENST00000555353 ATP6V1AP38606 617 aa27.07■■□□□ 1.92
FOXN3-209ENST00000555353 ZNF827Q17R98 1081 aa27.07■■□□□ 1.92
FOXN3-209ENST00000555353 MCM10Q7L590 875 aa27.07■■□□□ 1.92
FOXN3-209ENST00000555353 RUNDC1Q96C34 613 aa27.07■■□□□ 1.92
FOXN3-209ENST00000555353 SIPA1L3O60292 1781 aaPredicted RBP27.07■■□□□ 1.92
FOXN3-209ENST00000555353 PTCD1O75127 700 aaKnown RBP27.06■■□□□ 1.92
FOXN3-209ENST00000555353 AKT1S1Q96B36 256 aa27.05■■□□□ 1.92
FOXN3-209ENST00000555353 DCTN1Q14203 1278 aa27.05■■□□□ 1.92
FOXN3-209ENST00000555353 ZNF831Q5JPB2 1677 aa27.04■■□□□ 1.92
FOXN3-209ENST00000555353 SLC39A6Q13433 755 aa27.04■■□□□ 1.92
FOXN3-209ENST00000555353 TFCP2L1Q9NZI6 479 aa27.04■■□□□ 1.92
FOXN3-209ENST00000555353 C4BP0C0L5 1744 aa27.03■■□□□ 1.92
FOXN3-209ENST00000555353 RIPK4P57078 832 aa27.02■■□□□ 1.92
FOXN3-209ENST00000555353 TTC5Q8N0Z6 440 aa27.02■■□□□ 1.92
FOXN3-209ENST00000555353 TMPOP42166 694 aaKnown RBP27.01■■□□□ 1.92
FOXN3-209ENST00000555353 ITPK1Q13572 414 aa27.01■■□□□ 1.92
FOXN3-209ENST00000555353 QSER1Q2KHR3 1735 aa27.01■■□□□ 1.91
FOXN3-209ENST00000555353 LINC00116Q8NCU8 138 aa27.01■■□□□ 1.91
FOXN3-209ENST00000555353 SLC4A9Q96Q91 983 aa27.01■■□□□ 1.91
FOXN3-209ENST00000555353 TUBGCP6Q96RT7 1819 aa27.01■■□□□ 1.91
FOXN3-209ENST00000555353 BTBD11A6QL63 1104 aa27■■□□□ 1.91
FOXN3-209ENST00000555353 AK7Q96M32 723 aa27■■□□□ 1.91
FOXN3-209ENST00000555353 LMOD3Q0VAK6 560 aa26.99■■□□□ 1.91
FOXN3-209ENST00000555353 PNISRQ8TF01 805 aaKnown RBP26.99■■□□□ 1.91
FOXN3-209ENST00000555353 RRP7AQ9Y3A4 280 aaKnown RBP26.99■■□□□ 1.91
FOXN3-209ENST00000555353 CASZ1Q86V15 1759 aa26.99■■□□□ 1.91
FOXN3-209ENST00000555353 UBR2Q8IWV8 1755 aa26.99■■□□□ 1.91
FOXN3-209ENST00000555353 NEUROD2Q15784 382 aa26.98■■□□□ 1.91
FOXN3-209ENST00000555353 ZNF790Q6PG37 636 aa26.98■■□□□ 1.91
FOXN3-209ENST00000555353 COL5A3P25940 1745 aaPredicted RBP26.97■■□□□ 1.91
FOXN3-209ENST00000555353 KCPQ6ZWJ8 1503 aa26.97■■□□□ 1.91
FOXN3-209ENST00000555353 PDGFDQ9GZP0 370 aaPredicted RBP26.97■■□□□ 1.91
FOXN3-209ENST00000555353 TAF7Q15545 349 aaPredicted RBP26.96■■□□□ 1.91
FOXN3-209ENST00000555353 PNPLA7Q6ZV29 1317 aa26.95■■□□□ 1.91
FOXN3-209ENST00000555353 SRCAPQ6ZRS2 3230 aa26.95■■□□□ 1.9
FOXN3-209ENST00000555353 TJP1Q07157 1748 aa26.95■■□□□ 1.9
FOXN3-209ENST00000555353 THUMPD2Q9BTF0 503 aaKnown RBP26.95■■□□□ 1.9
FOXN3-209ENST00000555353 CICQ96RK0 1608 aaPredicted RBP26.94■■□□□ 1.9
FOXN3-209ENST00000555353 UBR3Q6ZT12 1888 aa26.94■■□□□ 1.9
FOXN3-209ENST00000555353 APAF1O14727 1248 aa26.92■■□□□ 1.9
FOXN3-209ENST00000555353 VSIG10Q8N0Z9 540 aa26.92■■□□□ 1.9
FOXN3-209ENST00000555353 FLAD1Q8NFF5 587 aa26.92■■□□□ 1.9
FOXN3-209ENST00000555353 ZNF496Q96IT1 587 aaPredicted RBP26.92■■□□□ 1.9
FOXN3-209ENST00000555353 GNPATO15228 680 aa26.92■■□□□ 1.9
FOXN3-209ENST00000555353 FMNL2Q96PY5 1086 aa26.92■■□□□ 1.9
FOXN3-209ENST00000555353 MSH5O43196 834 aa26.91■■□□□ 1.9
FOXN3-209ENST00000555353 ZBTB7AO95365 584 aa26.91■■□□□ 1.9
FOXN3-209ENST00000555353 DNAJC10Q8IXB1 793 aa26.91■■□□□ 1.9
FOXN3-209ENST00000555353 CNTNAP4Q9C0A0 1308 aa26.91■■□□□ 1.9
FOXN3-209ENST00000555353 LRP5O75197 1615 aa26.91■■□□□ 1.9
FOXN3-209ENST00000555353 KCNQ3O43525 872 aa26.9■■□□□ 1.9
FOXN3-209ENST00000555353 RC3H1Q5TC82 1133 aaKnown RBP26.9■■□□□ 1.9
FOXN3-209ENST00000555353 SPON1Q9HCB6 807 aa26.9■■□□□ 1.9
FOXN3-209ENST00000555353 MYH14Q7Z406 1995 aaKnown RBP26.9■■□□□ 1.9
FOXN3-209ENST00000555353 HEG1Q9ULI3 1381 aa26.9■■□□□ 1.9
FOXN3-209ENST00000555353 PHF14O94880 888 aa26.89■■□□□ 1.9
FOXN3-209ENST00000555353 FAM9BQ8IZU0 186 aa26.89■■□□□ 1.9
FOXN3-209ENST00000555353 SSFA2P28290 1259 aa26.88■■□□□ 1.89
FOXN3-209ENST00000555353 COL23A1Q86Y22 540 aaPredicted RBP26.88■■□□□ 1.89
FOXN3-209ENST00000555353 MTFR1LQ9H019 292 aa26.88■■□□□ 1.89
FOXN3-209ENST00000555353 MIS18AQ9NYP9 233 aa26.88■■□□□ 1.89
FOXN3-209ENST00000555353 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP26.88■■□□□ 1.89
FOXN3-209ENST00000555353 CRKLP46109 303 aaKnown RBP26.88■■□□□ 1.89
FOXN3-209ENST00000555353 SLC16A10Q8TF71 515 aa26.88■■□□□ 1.89
FOXN3-209ENST00000555353 TRIM35Q9UPQ4 493 aa26.88■■□□□ 1.89
FOXN3-209ENST00000555353 RTCBQ9Y3I0 505 aaKnown RBP26.88■■□□□ 1.89
FOXN3-209ENST00000555353 KDM3BQ7LBC6 1761 aa26.86■■□□□ 1.89
FOXN3-209ENST00000555353 AMIGO3Q86WK7 504 aa26.86■■□□□ 1.89
FOXN3-209ENST00000555353 TEX13AQ9BXU3 409 aaPredicted RBP26.86■■□□□ 1.89
FOXN3-209ENST00000555353 ATF5Q9Y2D1 282 aaPredicted RBP26.86■■□□□ 1.89
FOXN3-209ENST00000555353 STARD3NLO95772 234 aa26.85■■□□□ 1.89
FOXN3-209ENST00000555353 CYP19A1P11511 503 aaPredicted RBP26.84■■□□□ 1.89
FOXN3-209ENST00000555353 RPS6KA4O75676 772 aa26.84■■□□□ 1.89
FOXN3-209ENST00000555353 SMIM5Q71RC9 77 aa26.84■■□□□ 1.89
FOXN3-209ENST00000555353 CCDC87Q9NVE4 849 aa26.84■■□□□ 1.89
FOXN3-209ENST00000555353 TSPYL4Q9UJ04 414 aa26.83■■□□□ 1.89
FOXN3-209ENST00000555353 SNRPA1P09661 255 aaKnown RBP26.82■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms