RNA–Protein interactions for RNA: ENST00000555252.5

MTHFD1-210, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 1 (best)

Gene MTHFD1, Length 2,053 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-210ENST00000555252 MBD3O95983 291 aa13.07□□□□□ -0.32
MTHFD1-210ENST00000555252 SASS6Q6UVJ0 657 aa13.07□□□□□ -0.32
MTHFD1-210ENST00000555252 LRSAM1Q6UWE0 723 aa13.07□□□□□ -0.32
MTHFD1-210ENST00000555252 MCM10Q7L590 875 aa13.07□□□□□ -0.32
MTHFD1-210ENST00000555252 RGS12O14924 1447 aa13.07□□□□□ -0.32
MTHFD1-210ENST00000555252 SOS1Q07889 1333 aaPredicted RBP13.07□□□□□ -0.32
MTHFD1-210ENST00000555252 IGSF1Q8N6C5 1336 aa13.07□□□□□ -0.32
MTHFD1-210ENST00000555252 ST18O60284 1047 aa13.06□□□□□ -0.32
MTHFD1-210ENST00000555252 MCTP1Q6DN14 999 aa13.06□□□□□ -0.32
MTHFD1-210ENST00000555252 CAVIN1Q6NZI2 390 aaKnown RBP13.06□□□□□ -0.32
MTHFD1-210ENST00000555252 R3HCC1Q9Y3T6 440 aaKnown RBP13.06□□□□□ -0.32
MTHFD1-210ENST00000555252 UQCRHLA0A096LP55 91 aa13.06□□□□□ -0.32
MTHFD1-210ENST00000555252 UQCRHP07919 91 aa13.06□□□□□ -0.32
MTHFD1-210ENST00000555252 AMPHP49418 695 aa13.06□□□□□ -0.32
MTHFD1-210ENST00000555252 RBSNQ9H1K0 784 aa13.06□□□□□ -0.32
MTHFD1-210ENST00000555252 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.06□□□□□ -0.32
MTHFD1-210ENST00000555252 FER1L4A9Z1Z3 1794 aa13.06□□□□□ -0.32
MTHFD1-210ENST00000555252 USP54Q70EL1 1684 aa13.05□□□□□ -0.32
MTHFD1-210ENST00000555252 KDM4FA0A1W2PPD8 638 aa13.05□□□□□ -0.32
MTHFD1-210ENST00000555252 KLHL34Q8N239 644 aa13.05□□□□□ -0.32
MTHFD1-210ENST00000555252 ATP10DQ9P241 1426 aa13.05□□□□□ -0.32
MTHFD1-210ENST00000555252 CCT4P50991 539 aaKnown RBP13.04□□□□□ -0.32
MTHFD1-210ENST00000555252 MTHFSDQ2M296 383 aaKnown RBP13.04□□□□□ -0.32
MTHFD1-210ENST00000555252 CASC1Q6TDU7 716 aa13.04□□□□□ -0.32
MTHFD1-210ENST00000555252 USP26Q9BXU7 913 aa13.04□□□□□ -0.32
MTHFD1-210ENST00000555252 BABAM1Q9NWV8 329 aa13.04□□□□□ -0.32
MTHFD1-210ENST00000555252 PRDM4Q9UKN5 801 aa13.04□□□□□ -0.32
MTHFD1-210ENST00000555252 TTC22Q5TAA0 569 aa13.04□□□□□ -0.32
MTHFD1-210ENST00000555252 CEP85Q6P2H3 762 aa13.04□□□□□ -0.32
MTHFD1-210ENST00000555252 RBM42Q9BTD8 480 aaKnown RBP13.04□□□□□ -0.32
MTHFD1-210ENST00000555252 FOXD4L1Q9NU39 408 aa13.04□□□□□ -0.32
MTHFD1-210ENST00000555252 TSPYL4Q9UJ04 414 aa13.04□□□□□ -0.32
MTHFD1-210ENST00000555252 TUBGCP6Q96RT7 1819 aa13.04□□□□□ -0.32
MTHFD1-210ENST00000555252 RTL1A6NKG5 1358 aa13.04□□□□□ -0.32
MTHFD1-210ENST00000555252 PIK3C2AO00443 1686 aa13.04□□□□□ -0.32
MTHFD1-210ENST00000555252 HMMRO75330 724 aa13.03□□□□□ -0.32
MTHFD1-210ENST00000555252 PLEKHM2Q8IWE5 1019 aa13.03□□□□□ -0.32
MTHFD1-210ENST00000555252 EYA1Q99502 592 aa13.03□□□□□ -0.32
MTHFD1-210ENST00000555252 SLC4A2P04920 1241 aa13.03□□□□□ -0.32
MTHFD1-210ENST00000555252 PRIM1P49642 420 aaKnown RBP13.03□□□□□ -0.32
MTHFD1-210ENST00000555252 MCM2P49736 904 aa13.02□□□□□ -0.33
MTHFD1-210ENST00000555252 FAM13BQ9NYF5 915 aa13.02□□□□□ -0.33
MTHFD1-210ENST00000555252 REC8O95072 547 aa13.01□□□□□ -0.33
MTHFD1-210ENST00000555252 GSPT1P15170 499 aaKnown RBP13.01□□□□□ -0.33
MTHFD1-210ENST00000555252 NLRP6P59044 892 aa13.01□□□□□ -0.33
MTHFD1-210ENST00000555252 KRT24Q2M2I5 525 aa13.01□□□□□ -0.33
MTHFD1-210ENST00000555252 SYAP1Q96A49 352 aaPredicted RBP13.01□□□□□ -0.33
MTHFD1-210ENST00000555252 MSH6P52701 1360 aa13.01□□□□□ -0.33
MTHFD1-210ENST00000555252 LRRC37A3O60309 1634 aa13.01□□□□□ -0.33
MTHFD1-210ENST00000555252 SOX12O15370 315 aa13.01□□□□□ -0.33
MTHFD1-210ENST00000555252 NCLP19338 710 aaKnown RBP13.01□□□□□ -0.33
MTHFD1-210ENST00000555252 UTP14CQ5TAP6 766 aaKnown RBP13.01□□□□□ -0.33
MTHFD1-210ENST00000555252 PRIMPOLQ96LW4 560 aa13.01□□□□□ -0.33
MTHFD1-210ENST00000555252 STK31Q9BXU1 1019 aa13.01□□□□□ -0.33
MTHFD1-210ENST00000555252 ADAMTSL3P82987 1691 aa13□□□□□ -0.33
MTHFD1-210ENST00000555252 CEP170BQ9Y4F5 1589 aaPredicted RBP13□□□□□ -0.33
MTHFD1-210ENST00000555252 GNAT3A8MTJ3 354 aa13□□□□□ -0.33
MTHFD1-210ENST00000555252 RBM10P98175 930 aaKnown RBP13□□□□□ -0.33
MTHFD1-210ENST00000555252 GPT2Q8TD30 523 aa13□□□□□ -0.33
MTHFD1-210ENST00000555252 PHF14O94880 888 aa13□□□□□ -0.33
MTHFD1-210ENST00000555252 HOXC9P31274 260 aa13□□□□□ -0.33
MTHFD1-210ENST00000555252 HMGN5P82970 282 aaKnown RBP13□□□□□ -0.33
MTHFD1-210ENST00000555252 XPCQ01831 940 aaPredicted RBP13□□□□□ -0.33
MTHFD1-210ENST00000555252 UVSSAQ2YD98 709 aa13□□□□□ -0.33
MTHFD1-210ENST00000555252 CCDC30Q5VVM6 783 aa13□□□□□ -0.33
MTHFD1-210ENST00000555252 FAM184AQ8NB25 1140 aa13□□□□□ -0.33
MTHFD1-210ENST00000555252 RGPD8O14715 1765 aaPredicted RBP12.99□□□□□ -0.33
MTHFD1-210ENST00000555252 FOXO3O43524 673 aa12.99□□□□□ -0.33
MTHFD1-210ENST00000555252 PRPF40AO75400 957 aaKnown RBP12.99□□□□□ -0.33
MTHFD1-210ENST00000555252 KIAA2012Q0VF49 1180 aa12.99□□□□□ -0.33
MTHFD1-210ENST00000555252 MYRIPQ8NFW9 859 aa12.98□□□□□ -0.33
MTHFD1-210ENST00000555252 MEIS3Q99687 375 aa12.98□□□□□ -0.33
MTHFD1-210ENST00000555252 CCDC94Q9BW85 323 aaPredicted RBP12.98□□□□□ -0.33
MTHFD1-210ENST00000555252 MAP3K5Q99683 1374 aa12.98□□□□□ -0.33
MTHFD1-210ENST00000555252 KCNA6P17658 529 aa12.98□□□□□ -0.33
MTHFD1-210ENST00000555252 GTF2F1P35269 517 aaKnown RBP eCLIP12.98□□□□□ -0.33
MTHFD1-210ENST00000555252 CHMP4AQ9BY43 222 aa12.98□□□□□ -0.33
MTHFD1-210ENST00000555252 TMEM63CQ9P1W3 806 aa12.98□□□□□ -0.33
MTHFD1-210ENST00000555252 GNAI2P04899 355 aa12.97□□□□□ -0.33
MTHFD1-210ENST00000555252 GNAI3P08754 354 aa12.97□□□□□ -0.33
MTHFD1-210ENST00000555252 OSBPL3Q9H4L5 887 aa12.97□□□□□ -0.33
MTHFD1-210ENST00000555252 ABTB2Q8N961 1025 aa12.97□□□□□ -0.33
MTHFD1-210ENST00000555252 INTS4Q96HW7 963 aaKnown RBP12.97□□□□□ -0.33
MTHFD1-210ENST00000555252 TSPY26PQ9H489 355 aa12.97□□□□□ -0.33
MTHFD1-210ENST00000555252 MIS18AQ9NYP9 233 aa12.97□□□□□ -0.33
MTHFD1-210ENST00000555252 ZDHHC9Q9Y397 364 aa12.97□□□□□ -0.33
MTHFD1-210ENST00000555252 NWD1Q149M9 1564 aa12.96□□□□□ -0.33
MTHFD1-210ENST00000555252 MARF1Q9Y4F3 1742 aaKnown RBP12.96□□□□□ -0.33
MTHFD1-210ENST00000555252 PXDNLA1KZ92 1463 aa12.96□□□□□ -0.33
MTHFD1-210ENST00000555252 TAF7Q15545 349 aaPredicted RBP12.96□□□□□ -0.33
MTHFD1-210ENST00000555252 TCHHQ07283 1943 aa12.95□□□□□ -0.34
MTHFD1-210ENST00000555252 SYCE3A1L190 88 aa12.95□□□□□ -0.34
MTHFD1-210ENST00000555252 G2E3Q7L622 706 aa12.95□□□□□ -0.34
MTHFD1-210ENST00000555252 IL17RAQ96F46 866 aa12.95□□□□□ -0.34
MTHFD1-210ENST00000555252 ERC2O15083 957 aa12.95□□□□□ -0.34
MTHFD1-210ENST00000555252 BRD1O95696 1058 aa12.95□□□□□ -0.34
MTHFD1-210ENST00000555252 FLIIQ13045 1269 aa12.95□□□□□ -0.34
MTHFD1-210ENST00000555252 CUL4AQ13619 759 aa12.95□□□□□ -0.34
MTHFD1-210ENST00000555252 SLC4A10Q6U841 1118 aa12.95□□□□□ -0.34
MTHFD1-210ENST00000555252 C16orf71Q8IYS4 520 aaPredicted RBP12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 97.8 ms