RNA–Protein interactions for RNA: ENST00000554811.5

XRCC3-208, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 2

Gene XRCC3, Length 3,668 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-208ENST00000554811 JARID2Q92833 1246 aaPredicted RBP14.39□□□□□ -0.11
XRCC3-208ENST00000554811 TCEANC2Q96MN5 208 aa14.39□□□□□ -0.11
XRCC3-208ENST00000554811 DIAPH3Q9NSV4 1193 aa14.39□□□□□ -0.11
XRCC3-208ENST00000554811 TAF7Q15545 349 aaPredicted RBP14.38□□□□□ -0.11
XRCC3-208ENST00000554811 MPRIPQ6WCQ1 1025 aa14.38□□□□□ -0.11
XRCC3-208ENST00000554811 ZNF830Q96NB3 372 aaPredicted RBP14.38□□□□□ -0.11
XRCC3-208ENST00000554811 TSPOAP1O95153 1857 aa14.38□□□□□ -0.11
XRCC3-208ENST00000554811 EDC4Q6P2E9 1401 aaKnown RBP14.38□□□□□ -0.11
XRCC3-208ENST00000554811 GNAT3A8MTJ3 354 aa14.38□□□□□ -0.11
XRCC3-208ENST00000554811 PPP1R42Q7Z4L9 355 aa14.38□□□□□ -0.11
XRCC3-208ENST00000554811 PNPLA6Q8IY17 1366 aa14.38□□□□□ -0.11
XRCC3-208ENST00000554811 PPFIA3O75145 1194 aa14.37□□□□□ -0.11
XRCC3-208ENST00000554811 FERMT3Q86UX7 667 aa14.37□□□□□ -0.11
XRCC3-208ENST00000554811 ARHGEF28Q8N1W1 1705 aaKnown RBP14.37□□□□□ -0.11
XRCC3-208ENST00000554811 LTKP29376 864 aa14.37□□□□□ -0.11
XRCC3-208ENST00000554811 ESYT1Q9BSJ8 1104 aa14.37□□□□□ -0.11
XRCC3-208ENST00000554811 LMBRD1Q9NUN5 540 aa14.37□□□□□ -0.11
XRCC3-208ENST00000554811 COL3A1P02461 1466 aaPredicted RBP14.37□□□□□ -0.11
XRCC3-208ENST00000554811 SETD1BQ9UPS6 1966 aaKnown RBP14.36□□□□□ -0.11
XRCC3-208ENST00000554811 ZNF330Q9Y3S2 320 aaPredicted RBP14.36□□□□□ -0.11
XRCC3-208ENST00000554811 PTPRCP08575 1304 aa14.36□□□□□ -0.11
XRCC3-208ENST00000554811 PIK3C2BO00750 1634 aa14.36□□□□□ -0.11
XRCC3-208ENST00000554811 FGD1P98174 961 aa14.36□□□□□ -0.11
XRCC3-208ENST00000554811 GPT2Q8TD30 523 aa14.36□□□□□ -0.11
XRCC3-208ENST00000554811 TMEM63CQ9P1W3 806 aa14.36□□□□□ -0.11
XRCC3-208ENST00000554811 PI4KAP2A4QPH2 592 aa14.36□□□□□ -0.11
XRCC3-208ENST00000554811 PIP4K2AP48426 406 aaPredicted RBP14.36□□□□□ -0.11
XRCC3-208ENST00000554811 ZSCAN30Q86W11 494 aa14.36□□□□□ -0.11
XRCC3-208ENST00000554811 PI4KAP1Q8N8J0 262 aa14.36□□□□□ -0.11
XRCC3-208ENST00000554811 SRCIN1Q9C0H9 1055 aa14.36□□□□□ -0.11
XRCC3-208ENST00000554811 PA2G4Q9UQ80 394 aaKnown RBP14.36□□□□□ -0.11
XRCC3-208ENST00000554811 STK3Q13188 491 aa14.35□□□□□ -0.11
XRCC3-208ENST00000554811 LRRC59Q96AG4 307 aaKnown RBP14.35□□□□□ -0.11
XRCC3-208ENST00000554811 LMTK2Q8IWU2 1503 aa14.35□□□□□ -0.11
XRCC3-208ENST00000554811 ALKQ9UM73 1620 aa14.35□□□□□ -0.11
XRCC3-208ENST00000554811 MYO5BQ9ULV0 1848 aa14.35□□□□□ -0.11
XRCC3-208ENST00000554811 CWC22Q9HCG8 908 aaKnown RBP14.35□□□□□ -0.11
XRCC3-208ENST00000554811 CHPF2Q9P2E5 772 aa14.35□□□□□ -0.11
XRCC3-208ENST00000554811 SMC3Q9UQE7 1217 aa14.35□□□□□ -0.11
XRCC3-208ENST00000554811 GADD45BO75293 160 aaPredicted RBP14.34□□□□□ -0.11
XRCC3-208ENST00000554811 PSME1Q06323 249 aa14.34□□□□□ -0.11
XRCC3-208ENST00000554811 CCDC83Q8IWF9 413 aa14.34□□□□□ -0.11
XRCC3-208ENST00000554811 SIGLEC1Q9BZZ2 1709 aa14.34□□□□□ -0.11
XRCC3-208ENST00000554811 ROBO2Q9HCK4 1378 aa14.34□□□□□ -0.11
XRCC3-208ENST00000554811 MAP2P11137 1827 aaKnown RBP14.34□□□□□ -0.11
XRCC3-208ENST00000554811 KCNQ3O43525 872 aa14.34□□□□□ -0.11
XRCC3-208ENST00000554811 IFIT2P09913 472 aaKnown RBP14.34□□□□□ -0.11
XRCC3-208ENST00000554811 NCBP3Q53F19 620 aaKnown RBP14.34□□□□□ -0.11
XRCC3-208ENST00000554811 ESCO1Q5FWF5 840 aa14.34□□□□□ -0.11
XRCC3-208ENST00000554811 ZMYM3Q14202 1370 aa14.34□□□□□ -0.11
XRCC3-208ENST00000554811 PTCH1Q13635 1447 aa14.34□□□□□ -0.11
XRCC3-208ENST00000554811 CASTP20810 708 aaKnown RBP14.34□□□□□ -0.11
XRCC3-208ENST00000554811 NBPF7P0C2Y1 421 aaPredicted RBP14.33□□□□□ -0.12
XRCC3-208ENST00000554811 MYL6BP14649 208 aa14.33□□□□□ -0.12
XRCC3-208ENST00000554811 CHMLP26374 656 aa14.33□□□□□ -0.12
XRCC3-208ENST00000554811 CPS1P31327 1500 aa14.33□□□□□ -0.12
XRCC3-208ENST00000554811 ZNF530Q6P9A1 599 aaPredicted RBP14.33□□□□□ -0.12
XRCC3-208ENST00000554811 ARHGEF40Q8TER5 1519 aa14.33□□□□□ -0.12
XRCC3-208ENST00000554811 FBXW7Q969H0 707 aa14.33□□□□□ -0.12
XRCC3-208ENST00000554811 SPC24Q8NBT2 197 aa14.33□□□□□ -0.12
XRCC3-208ENST00000554811 LGR6Q9HBX8 967 aa14.33□□□□□ -0.12
XRCC3-208ENST00000554811 MYO3AQ8NEV4 1616 aa14.33□□□□□ -0.12
XRCC3-208ENST00000554811 GOLGA6L4A6NEF3 574 aa14.33□□□□□ -0.12
XRCC3-208ENST00000554811 PRPF40BQ6NWY9 871 aaKnown RBP14.33□□□□□ -0.12
XRCC3-208ENST00000554811 USP25Q9UHP3 1055 aa14.33□□□□□ -0.12
XRCC3-208ENST00000554811 CNPY2Q9Y2B0 182 aa14.33□□□□□ -0.12
XRCC3-208ENST00000554811 NECAB1Q8N987 351 aa14.32□□□□□ -0.12
XRCC3-208ENST00000554811 JAKMIP1Q96N16 626 aaKnown RBP14.32□□□□□ -0.12
XRCC3-208ENST00000554811 CCDC8Q9H0W5 538 aaPredicted RBP14.32□□□□□ -0.12
XRCC3-208ENST00000554811 SYAP1Q96A49 352 aaPredicted RBP14.32□□□□□ -0.12
XRCC3-208ENST00000554811 DDIT3P35638 169 aa14.31□□□□□ -0.12
XRCC3-208ENST00000554811 TSPY26PQ9H489 355 aa14.31□□□□□ -0.12
XRCC3-208ENST00000554811 PIK3R4Q99570 1358 aa14.31□□□□□ -0.12
XRCC3-208ENST00000554811 IFT172Q9UG01 1749 aa14.31□□□□□ -0.12
XRCC3-208ENST00000554811 C17orf53Q8N3J3 647 aaPredicted RBP14.31□□□□□ -0.12
XRCC3-208ENST00000554811 ZDHHC9Q9Y397 364 aa14.31□□□□□ -0.12
XRCC3-208ENST00000554811 ADGRB2O60241 1585 aa14.31□□□□□ -0.12
XRCC3-208ENST00000554811 BRPF1P55201 1214 aaPredicted RBP14.31□□□□□ -0.12
XRCC3-208ENST00000554811 DRC7Q8IY82 874 aa14.31□□□□□ -0.12
XRCC3-208ENST00000554811 IL17REQ8NFR9 667 aa14.31□□□□□ -0.12
XRCC3-208ENST00000554811 IL25Q9H293 177 aa14.31□□□□□ -0.12
XRCC3-208ENST00000554811 FAM177BA6PVY3 158 aa14.3□□□□□ -0.12
XRCC3-208ENST00000554811 CEBPZQ03701 1054 aaKnown RBP14.3□□□□□ -0.12
XRCC3-208ENST00000554811 CWF19L2Q2TBE0 894 aaKnown RBP14.3□□□□□ -0.12
XRCC3-208ENST00000554811 VIRMAQ69YN4 1812 aaKnown RBP14.3□□□□□ -0.12
XRCC3-208ENST00000554811 DIP2CQ9Y2E4 1556 aa14.3□□□□□ -0.12
XRCC3-208ENST00000554811 RHPN1Q8TCX5 695 aa14.3□□□□□ -0.12
XRCC3-208ENST00000554811 ISY1Q9ULR0 285 aaKnown RBP14.3□□□□□ -0.12
XRCC3-208ENST00000554811 BTBD11A6QL63 1104 aa14.3□□□□□ -0.12
XRCC3-208ENST00000554811 HCLS1P14317 486 aaPredicted RBP14.3□□□□□ -0.12
XRCC3-208ENST00000554811 ATP8B2P98198 1209 aa14.3□□□□□ -0.12
XRCC3-208ENST00000554811 C1orf141Q5JVX7 400 aa14.3□□□□□ -0.12
XRCC3-208ENST00000554811 FAM173BQ6P4H8 233 aa14.3□□□□□ -0.12
XRCC3-208ENST00000554811 USP48Q86UV5 1035 aa14.3□□□□□ -0.12
XRCC3-208ENST00000554811 AACSQ86V21 672 aa14.3□□□□□ -0.12
XRCC3-208ENST00000554811 CNTROBQ8N137 903 aa14.3□□□□□ -0.12
XRCC3-208ENST00000554811 CLASRPQ8N2M8 674 aaKnown RBP14.3□□□□□ -0.12
XRCC3-208ENST00000554811 CAMK4Q16566 473 aa14.29□□□□□ -0.12
XRCC3-208ENST00000554811 KLHDC4Q8TBB5 520 aa14.29□□□□□ -0.12
XRCC3-208ENST00000554811 CSB-PGBD3P0DP91 1061 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms