RNA–Protein interactions for RNA: ENST00000554270.5

PTPN21-205, Transcript of protein tyrosine phosphatase, non-receptor type 21, humanhuman

TSL 1 (best)

Gene PTPN21, Length 4,008 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN21-205ENST00000554270 CPA1P15085 419 aa13.86□□□□□ -0.19
PTPN21-205ENST00000554270 FGD1P98174 961 aa13.86□□□□□ -0.19
PTPN21-205ENST00000554270 TAF7Q15545 349 aaPredicted RBP13.86□□□□□ -0.19
PTPN21-205ENST00000554270 SIL1Q9H173 461 aa13.86□□□□□ -0.19
PTPN21-205ENST00000554270 ROBO2Q9HCK4 1378 aa13.86□□□□□ -0.19
PTPN21-205ENST00000554270 TSPOAP1O95153 1857 aa13.86□□□□□ -0.19
PTPN21-205ENST00000554270 GOLGA6L4A6NEF3 574 aa13.86□□□□□ -0.19
PTPN21-205ENST00000554270 PALD1Q9ULE6 856 aa13.86□□□□□ -0.19
PTPN21-205ENST00000554270 NCBP3Q53F19 620 aaKnown RBP13.85□□□□□ -0.19
PTPN21-205ENST00000554270 DRC7Q8IY82 874 aa13.85□□□□□ -0.19
PTPN21-205ENST00000554270 PPLO60437 1756 aa13.85□□□□□ -0.19
PTPN21-205ENST00000554270 RTL1A6NKG5 1358 aa13.85□□□□□ -0.19
PTPN21-205ENST00000554270 JARID2Q92833 1246 aaPredicted RBP13.85□□□□□ -0.19
PTPN21-205ENST00000554270 LRRC59Q96AG4 307 aaKnown RBP13.85□□□□□ -0.19
PTPN21-205ENST00000554270 NSFL1CQ9UNZ2 370 aaKnown RBP13.85□□□□□ -0.19
PTPN21-205ENST00000554270 NEO1Q92859 1461 aa13.85□□□□□ -0.19
PTPN21-205ENST00000554270 KIAA2012Q0VF49 1180 aa13.85□□□□□ -0.19
PTPN21-205ENST00000554270 SYAP1Q96A49 352 aaPredicted RBP13.85□□□□□ -0.19
PTPN21-205ENST00000554270 DIAPH3Q9NSV4 1193 aa13.85□□□□□ -0.19
PTPN21-205ENST00000554270 PIK3C2BO00750 1634 aa13.84□□□□□ -0.19
PTPN21-205ENST00000554270 ALKQ9UM73 1620 aa13.84□□□□□ -0.19
PTPN21-205ENST00000554270 PPP1R42Q7Z4L9 355 aa13.84□□□□□ -0.19
PTPN21-205ENST00000554270 FERMT3Q86UX7 667 aa13.84□□□□□ -0.19
PTPN21-205ENST00000554270 UNC5CLQ8IV45 518 aa13.84□□□□□ -0.19
PTPN21-205ENST00000554270 SPC24Q8NBT2 197 aa13.84□□□□□ -0.19
PTPN21-205ENST00000554270 CWC22Q9HCG8 908 aaKnown RBP13.84□□□□□ -0.19
PTPN21-205ENST00000554270 PI4KAP2A4QPH2 592 aa13.84□□□□□ -0.19
PTPN21-205ENST00000554270 PI4KAP1Q8N8J0 262 aa13.84□□□□□ -0.19
PTPN21-205ENST00000554270 PTPRCP08575 1304 aa13.84□□□□□ -0.19
PTPN21-205ENST00000554270 ARHGEF40Q8TER5 1519 aa13.84□□□□□ -0.19
PTPN21-205ENST00000554270 SRCIN1Q9C0H9 1055 aa13.83□□□□□ -0.19
PTPN21-205ENST00000554270 LMBRD1Q9NUN5 540 aa13.83□□□□□ -0.19
PTPN21-205ENST00000554270 ISY1Q9ULR0 285 aaKnown RBP13.83□□□□□ -0.19
PTPN21-205ENST00000554270 ZNF330Q9Y3S2 320 aaPredicted RBP13.83□□□□□ -0.19
PTPN21-205ENST00000554270 ZC3H13Q5T200 1668 aaKnown RBP13.83□□□□□ -0.2
PTPN21-205ENST00000554270 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.83□□□□□ -0.2
PTPN21-205ENST00000554270 SMC3Q9UQE7 1217 aa13.83□□□□□ -0.2
PTPN21-205ENST00000554270 TNRQ92752 1358 aa13.83□□□□□ -0.2
PTPN21-205ENST00000554270 COL3A1P02461 1466 aaPredicted RBP13.83□□□□□ -0.2
PTPN21-205ENST00000554270 TMEM63CQ9P1W3 806 aa13.83□□□□□ -0.2
PTPN21-205ENST00000554270 KCNQ3O43525 872 aa13.82□□□□□ -0.2
PTPN21-205ENST00000554270 ZNF530Q6P9A1 599 aaPredicted RBP13.82□□□□□ -0.2
PTPN21-205ENST00000554270 FBXW7Q969H0 707 aa13.82□□□□□ -0.2
PTPN21-205ENST00000554270 TCEANC2Q96MN5 208 aa13.82□□□□□ -0.2
PTPN21-205ENST00000554270 USP25Q9UHP3 1055 aa13.82□□□□□ -0.2
PTPN21-205ENST00000554270 UQCRHLA0A096LP55 91 aa13.82□□□□□ -0.2
PTPN21-205ENST00000554270 FAM177BA6PVY3 158 aa13.82□□□□□ -0.2
PTPN21-205ENST00000554270 UQCRHP07919 91 aa13.82□□□□□ -0.2
PTPN21-205ENST00000554270 PIP4K2AP48426 406 aaPredicted RBP13.82□□□□□ -0.2
PTPN21-205ENST00000554270 TSPY26PQ9H489 355 aa13.82□□□□□ -0.2
PTPN21-205ENST00000554270 LGR6Q9HBX8 967 aa13.82□□□□□ -0.2
PTPN21-205ENST00000554270 CHPF2Q9P2E5 772 aa13.82□□□□□ -0.2
PTPN21-205ENST00000554270 PPFIA3O75145 1194 aa13.81□□□□□ -0.2
PTPN21-205ENST00000554270 DIP2CQ9Y2E4 1556 aa13.81□□□□□ -0.2
PTPN21-205ENST00000554270 KCNA6P17658 529 aa13.81□□□□□ -0.2
PTPN21-205ENST00000554270 STK3Q13188 491 aa13.81□□□□□ -0.2
PTPN21-205ENST00000554270 GPT2Q8TD30 523 aa13.81□□□□□ -0.2
PTPN21-205ENST00000554270 PA2G4Q9UQ80 394 aaKnown RBP13.81□□□□□ -0.2
PTPN21-205ENST00000554270 ARHGEF28Q8N1W1 1705 aaKnown RBP13.81□□□□□ -0.2
PTPN21-205ENST00000554270 CPS1P31327 1500 aa13.81□□□□□ -0.2
PTPN21-205ENST00000554270 MYL6BP14649 208 aa13.81□□□□□ -0.2
PTPN21-205ENST00000554270 IL17REQ8NFR9 667 aa13.81□□□□□ -0.2
PTPN21-205ENST00000554270 ESYT1Q9BSJ8 1104 aa13.81□□□□□ -0.2
PTPN21-205ENST00000554270 SIGLEC1Q9BZZ2 1709 aa13.81□□□□□ -0.2
PTPN21-205ENST00000554270 NBPF7P0C2Y1 421 aaPredicted RBP13.8□□□□□ -0.2
PTPN21-205ENST00000554270 CSB-PGBD3P0DP91 1061 aa13.8□□□□□ -0.2
PTPN21-205ENST00000554270 CCDC83Q8IWF9 413 aa13.8□□□□□ -0.2
PTPN21-205ENST00000554270 A2ML1A8K2U0 1454 aa13.8□□□□□ -0.2
PTPN21-205ENST00000554270 ARHGAP31Q2M1Z3 1444 aa13.8□□□□□ -0.2
PTPN21-205ENST00000554270 GADD45BO75293 160 aaPredicted RBP13.8□□□□□ -0.2
PTPN21-205ENST00000554270 IFIT2P09913 472 aaKnown RBP13.8□□□□□ -0.2
PTPN21-205ENST00000554270 BRPF1P55201 1214 aaPredicted RBP13.8□□□□□ -0.2
PTPN21-205ENST00000554270 C17orf53Q8N3J3 647 aaPredicted RBP13.8□□□□□ -0.2
PTPN21-205ENST00000554270 ZC3H6P61129 1189 aaKnown RBP13.8□□□□□ -0.2
PTPN21-205ENST00000554270 C1orf141Q5JVX7 400 aa13.8□□□□□ -0.2
PTPN21-205ENST00000554270 PIK3R4Q99570 1358 aa13.79□□□□□ -0.2
PTPN21-205ENST00000554270 A0A0G2JS52 829 aa13.79□□□□□ -0.2
PTPN21-205ENST00000554270 BTBD11A6QL63 1104 aa13.79□□□□□ -0.2
PTPN21-205ENST00000554270 ZMYND15Q9H091 742 aa13.79□□□□□ -0.2
PTPN21-205ENST00000554270 MBD3O95983 291 aa13.79□□□□□ -0.2
PTPN21-205ENST00000554270 PTCH1Q13635 1447 aa13.79□□□□□ -0.2
PTPN21-205ENST00000554270 TSC1Q92574 1164 aa13.79□□□□□ -0.2
PTPN21-205ENST00000554270 HCLS1P14317 486 aaPredicted RBP13.78□□□□□ -0.2
PTPN21-205ENST00000554270 CASTP20810 708 aaKnown RBP13.78□□□□□ -0.2
PTPN21-205ENST00000554270 CEBPZQ03701 1054 aaKnown RBP13.78□□□□□ -0.2
PTPN21-205ENST00000554270 CAMK4Q16566 473 aa13.78□□□□□ -0.2
PTPN21-205ENST00000554270 PRDM10Q9NQV6 1147 aa13.78□□□□□ -0.2
PTPN21-205ENST00000554270 CNPY2Q9Y2B0 182 aa13.78□□□□□ -0.2
PTPN21-205ENST00000554270 MYO3AQ8NEV4 1616 aa13.78□□□□□ -0.2
PTPN21-205ENST00000554270 RRP9O43818 475 aaKnown RBP13.78□□□□□ -0.2
PTPN21-205ENST00000554270 CHMLP26374 656 aa13.78□□□□□ -0.2
PTPN21-205ENST00000554270 CCDC8Q9H0W5 538 aaPredicted RBP13.78□□□□□ -0.2
PTPN21-205ENST00000554270 CWF19L2Q2TBE0 894 aaKnown RBP13.78□□□□□ -0.2
PTPN21-205ENST00000554270 JAKMIP1Q96N16 626 aaKnown RBP13.78□□□□□ -0.2
PTPN21-205ENST00000554270 ATP8B2P98198 1209 aa13.77□□□□□ -0.2
PTPN21-205ENST00000554270 HSP90B1P14625 803 aaKnown RBP13.77□□□□□ -0.21
PTPN21-205ENST00000554270 HOXC9P31274 260 aa13.77□□□□□ -0.21
PTPN21-205ENST00000554270 PRPF40BQ6NWY9 871 aaKnown RBP13.77□□□□□ -0.21
PTPN21-205ENST00000554270 USP48Q86UV5 1035 aa13.77□□□□□ -0.21
PTPN21-205ENST00000554270 CLASRPQ8N2M8 674 aaKnown RBP13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms