RNA–Protein interactions for RNA: ENST00000553947.1

AL049839.2-201, humanhuman

APPRIS P1 TSL 2 BASIC

Gene AL049839.2, Length 3,067 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL049839.2-201ENST00000553947 ADGRL3Q9HAR2 1447 aa11.15□□□□□ -0.62
AL049839.2-201ENST00000553947 PTPRCP08575 1304 aa11.15□□□□□ -0.62
AL049839.2-201ENST00000553947 LTN1O94822 1766 aa11.14□□□□□ -0.63
AL049839.2-201ENST00000553947 XPCQ01831 940 aaPredicted RBP11.14□□□□□ -0.63
AL049839.2-201ENST00000553947 ORAI2Q96SN7 254 aa11.14□□□□□ -0.63
AL049839.2-201ENST00000553947 LRRC37A3O60309 1634 aa11.14□□□□□ -0.63
AL049839.2-201ENST00000553947 RTL1A6NKG5 1358 aa11.14□□□□□ -0.63
AL049839.2-201ENST00000553947 ZBTB7CA1YPR0 619 aa11.14□□□□□ -0.63
AL049839.2-201ENST00000553947 PSME1Q06323 249 aa11.14□□□□□ -0.63
AL049839.2-201ENST00000553947 BMP2KLQ5H9B9 411 aa11.14□□□□□ -0.63
AL049839.2-201ENST00000553947 NECTIN2Q92692 538 aa11.14□□□□□ -0.63
AL049839.2-201ENST00000553947 DCTPP1Q9H773 170 aa11.14□□□□□ -0.63
AL049839.2-201ENST00000553947 NFAT5O94916 1531 aa11.13□□□□□ -0.63
AL049839.2-201ENST00000553947 HTATSF1O43719 755 aaKnown RBP11.13□□□□□ -0.63
AL049839.2-201ENST00000553947 NBPF6Q5VWK0 638 aa11.13□□□□□ -0.63
AL049839.2-201ENST00000553947 CEP85Q6P2H3 762 aa11.13□□□□□ -0.63
AL049839.2-201ENST00000553947 ANKRD44Q8N8A2 993 aa11.13□□□□□ -0.63
AL049839.2-201ENST00000553947 NBPF4Q96M43 638 aa11.13□□□□□ -0.63
AL049839.2-201ENST00000553947 ANTXR1Q9H6X2 564 aa11.13□□□□□ -0.63
AL049839.2-201ENST00000553947 NPHP4O75161 1426 aaPredicted RBP11.13□□□□□ -0.63
AL049839.2-201ENST00000553947 C16orf71Q8IYS4 520 aaPredicted RBP11.13□□□□□ -0.63
AL049839.2-201ENST00000553947 IP6K1Q92551 441 aa11.13□□□□□ -0.63
AL049839.2-201ENST00000553947 MAP3K5Q99683 1374 aa11.13□□□□□ -0.63
AL049839.2-201ENST00000553947 SLC4A10Q6U841 1118 aa11.12□□□□□ -0.63
AL049839.2-201ENST00000553947 SETD1BQ9UPS6 1966 aaKnown RBP11.12□□□□□ -0.63
AL049839.2-201ENST00000553947 OFD1O75665 1012 aa11.12□□□□□ -0.63
AL049839.2-201ENST00000553947 GSPT1P15170 499 aaKnown RBP11.11□□□□□ -0.63
AL049839.2-201ENST00000553947 GTF2E1P29083 439 aaPredicted RBP11.11□□□□□ -0.63
AL049839.2-201ENST00000553947 ZSCAN30Q86W11 494 aa11.11□□□□□ -0.63
AL049839.2-201ENST00000553947 PLEKHM2Q8IWE5 1019 aa11.11□□□□□ -0.63
AL049839.2-201ENST00000553947 OTUD7AQ8TE49 926 aaPredicted RBP11.11□□□□□ -0.63
AL049839.2-201ENST00000553947 LRRC59Q96AG4 307 aaKnown RBP11.11□□□□□ -0.63
AL049839.2-201ENST00000553947 UQCRHLA0A096LP55 91 aa11.11□□□□□ -0.63
AL049839.2-201ENST00000553947 UQCRHP07919 91 aa11.11□□□□□ -0.63
AL049839.2-201ENST00000553947 RPAP2Q8IXW5 612 aaPredicted RBP11.11□□□□□ -0.63
AL049839.2-201ENST00000553947 SMARCA5O60264 1052 aaPredicted RBP11.1□□□□□ -0.63
AL049839.2-201ENST00000553947 TBC1D9Q6ZT07 1266 aa11.1□□□□□ -0.63
AL049839.2-201ENST00000553947 APBB1O00213 710 aa11.1□□□□□ -0.63
AL049839.2-201ENST00000553947 TAF7Q15545 349 aaPredicted RBP11.1□□□□□ -0.63
AL049839.2-201ENST00000553947 LGR6Q9HBX8 967 aa11.1□□□□□ -0.63
AL049839.2-201ENST00000553947 CHMP5Q9NZZ3 219 aa11.1□□□□□ -0.63
AL049839.2-201ENST00000553947 RGPD2P0DJD1 1756 aa11.1□□□□□ -0.63
AL049839.2-201ENST00000553947 DDX11L8A8MPP1 907 aa11.1□□□□□ -0.63
AL049839.2-201ENST00000553947 MTERF4Q7Z6M4 381 aaKnown RBP11.1□□□□□ -0.63
AL049839.2-201ENST00000553947 ISY1Q9ULR0 285 aaKnown RBP11.1□□□□□ -0.63
AL049839.2-201ENST00000553947 RBM25P49756 843 aaKnown RBP11.09□□□□□ -0.63
AL049839.2-201ENST00000553947 FLIIQ13045 1269 aa11.09□□□□□ -0.63
AL049839.2-201ENST00000553947 STK31Q9BXU1 1019 aa11.09□□□□□ -0.63
AL049839.2-201ENST00000553947 FAM208AQ9UK61 1670 aaKnown RBP11.09□□□□□ -0.63
AL049839.2-201ENST00000553947 CCDC30Q5VVM6 783 aa11.08□□□□□ -0.64
AL049839.2-201ENST00000553947 GCP02774 474 aa11.08□□□□□ -0.64
AL049839.2-201ENST00000553947 FKBP5Q13451 457 aaPredicted RBP11.08□□□□□ -0.64
AL049839.2-201ENST00000553947 LMOD2Q6P5Q4 547 aa11.08□□□□□ -0.64
AL049839.2-201ENST00000553947 KCNH5Q8NCM2 988 aa11.08□□□□□ -0.64
AL049839.2-201ENST00000553947 CEMIPQ8WUJ3 1361 aa11.08□□□□□ -0.64
AL049839.2-201ENST00000553947 CCT4P50991 539 aaKnown RBP11.07□□□□□ -0.64
AL049839.2-201ENST00000553947 TAF7LQ5H9L4 462 aa11.07□□□□□ -0.64
AL049839.2-201ENST00000553947 KIF2CQ99661 725 aa11.07□□□□□ -0.64
AL049839.2-201ENST00000553947 KCNQ3O43525 872 aa11.07□□□□□ -0.64
AL049839.2-201ENST00000553947 CCDC173Q0VFZ6 552 aa11.07□□□□□ -0.64
AL049839.2-201ENST00000553947 TTC22Q5TAA0 569 aa11.07□□□□□ -0.64
AL049839.2-201ENST00000553947 ARHGEF25Q86VW2 580 aa11.07□□□□□ -0.64
AL049839.2-201ENST00000553947 PROSER2Q86WR7 435 aaPredicted RBP11.07□□□□□ -0.64
AL049839.2-201ENST00000553947 GAS2L3Q86XJ1 694 aa11.07□□□□□ -0.64
AL049839.2-201ENST00000553947 PHAXQ9H814 394 aaKnown RBP11.07□□□□□ -0.64
AL049839.2-201ENST00000553947 NASPP49321 788 aaPredicted RBP11.06□□□□□ -0.64
AL049839.2-201ENST00000553947 PPP4R3BQ5MIZ7 849 aa11.06□□□□□ -0.64
AL049839.2-201ENST00000553947 AXIN2Q9Y2T1 843 aa11.06□□□□□ -0.64
AL049839.2-201ENST00000553947 DMTNQ08495 405 aa11.06□□□□□ -0.64
AL049839.2-201ENST00000553947 CDC45O75419 566 aa11.05□□□□□ -0.64
AL049839.2-201ENST00000553947 MPRIPQ6WCQ1 1025 aa11.05□□□□□ -0.64
AL049839.2-201ENST00000553947 PLCD3Q8N3E9 789 aa11.05□□□□□ -0.64
AL049839.2-201ENST00000553947 BABAM1Q9NWV8 329 aa11.05□□□□□ -0.64
AL049839.2-201ENST00000553947 PHRF1Q9P1Y6 1649 aaKnown RBP11.05□□□□□ -0.64
AL049839.2-201ENST00000553947 VGLL3A8MV65 326 aa11.05□□□□□ -0.64
AL049839.2-201ENST00000553947 TERF1P54274 439 aa11.05□□□□□ -0.64
AL049839.2-201ENST00000553947 HDGFL1Q5TGJ6 251 aa11.05□□□□□ -0.64
AL049839.2-201ENST00000553947 MED1Q15648 1581 aaPredicted RBP11.05□□□□□ -0.64
AL049839.2-201ENST00000553947 PXDNQ92626 1479 aa11.05□□□□□ -0.64
AL049839.2-201ENST00000553947 GNAI2P04899 355 aa11.05□□□□□ -0.64
AL049839.2-201ENST00000553947 EIF2S2P20042 333 aaKnown RBP11.05□□□□□ -0.64
AL049839.2-201ENST00000553947 EIF4A1P60842 406 aaKnown RBP11.05□□□□□ -0.64
AL049839.2-201ENST00000553947 KRT28Q7Z3Y7 464 aa11.05□□□□□ -0.64
AL049839.2-201ENST00000553947 RBM42Q9BTD8 480 aaKnown RBP11.05□□□□□ -0.64
AL049839.2-201ENST00000553947 SLIT3O75094 1523 aa11.04□□□□□ -0.64
AL049839.2-201ENST00000553947 PNMA6EA0A0J9YXQ4 647 aa11.04□□□□□ -0.64
AL049839.2-201ENST00000553947 CD2BP2O95400 341 aaKnown RBP11.04□□□□□ -0.64
AL049839.2-201ENST00000553947 CDK11BP21127 795 aaKnown RBP11.04□□□□□ -0.64
AL049839.2-201ENST00000553947 ZNF530Q6P9A1 599 aaPredicted RBP11.04□□□□□ -0.64
AL049839.2-201ENST00000553947 PAXIP1Q6ZW49 1069 aaPredicted RBP11.04□□□□□ -0.64
AL049839.2-201ENST00000553947 EXOC6BQ9Y2D4 811 aa11.04□□□□□ -0.64
AL049839.2-201ENST00000553947 TRPM3Q9HCF6 1732 aaPredicted RBP11.04□□□□□ -0.64
AL049839.2-201ENST00000553947 UTP14CQ5TAP6 766 aaKnown RBP11.04□□□□□ -0.64
AL049839.2-201ENST00000553947 ANKRD24Q8TF21 1146 aa11.04□□□□□ -0.64
AL049839.2-201ENST00000553947 DDX17Q92841 729 aaKnown RBP11.04□□□□□ -0.64
AL049839.2-201ENST00000553947 C1orf167Q5SNV9 1468 aa11.04□□□□□ -0.64
AL049839.2-201ENST00000553947 SDSP20132 328 aa11.03□□□□□ -0.64
AL049839.2-201ENST00000553947 HSCBQ8IWL3 235 aa11.03□□□□□ -0.64
AL049839.2-201ENST00000553947 HMMRO75330 724 aa11.03□□□□□ -0.64
AL049839.2-201ENST00000553947 USP44Q9H0E7 712 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms