RNA–Protein interactions for RNA: ENST00000553772.5

COCH-206, Transcript of cochlin, humanhuman

TSL 4

Gene COCH, Length 554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COCH-206ENST00000553772 NFATC2IPQ8NCF5 419 aa26.38■■□□□ 1.81
COCH-206ENST00000553772 RTF1Q92541 710 aaKnown RBP26.38■■□□□ 1.81
COCH-206ENST00000553772 SIPA1L3O60292 1781 aaPredicted RBP26.37■■□□□ 1.81
COCH-206ENST00000553772 PALLDQ8WX93 1383 aa26.36■■□□□ 1.81
COCH-206ENST00000553772 CCDC146Q8IYE0 955 aa26.36■■□□□ 1.81
COCH-206ENST00000553772 CCER2I3L3R5 266 aa26.35■■□□□ 1.81
COCH-206ENST00000553772 ATG3Q9NT62 314 aa26.35■■□□□ 1.81
COCH-206ENST00000553772 HMGB2P26583 209 aaKnown RBP26.34■■□□□ 1.81
COCH-206ENST00000553772 TMPOP42166 694 aaKnown RBP26.34■■□□□ 1.81
COCH-206ENST00000553772 ASAP1Q9ULH1 1129 aa26.34■■□□□ 1.81
COCH-206ENST00000553772 TEFQ10587 303 aa26.33■■□□□ 1.81
COCH-206ENST00000553772 PAPPAQ13219 1627 aa26.32■■□□□ 1.8
COCH-206ENST00000553772 ZNF831Q5JPB2 1677 aa26.32■■□□□ 1.8
COCH-206ENST00000553772 RIPK4P57078 832 aa26.31■■□□□ 1.8
COCH-206ENST00000553772 LMOD3Q0VAK6 560 aa26.31■■□□□ 1.8
COCH-206ENST00000553772 MCM10Q7L590 875 aa26.3■■□□□ 1.8
COCH-206ENST00000553772 LRRC4BQ9NT99 713 aa26.3■■□□□ 1.8
COCH-206ENST00000553772 CCNL1Q9UK58 526 aaPredicted RBP26.3■■□□□ 1.8
COCH-206ENST00000553772 NBPF14Q5TI25 921 aa26.29■■□□□ 1.8
COCH-206ENST00000553772 TAF1LQ8IZX4 1826 aa26.29■■□□□ 1.8
COCH-206ENST00000553772 LOC102724428A0A0B4J2F2 783 aa26.28■■□□□ 1.8
COCH-206ENST00000553772 SIK1P57059 783 aa26.28■■□□□ 1.8
COCH-206ENST00000553772 DCTN1Q14203 1278 aa26.27■■□□□ 1.8
COCH-206ENST00000553772 UBR2Q8IWV8 1755 aa26.26■■□□□ 1.79
COCH-206ENST00000553772 C5P01031 1676 aa26.26■■□□□ 1.79
COCH-206ENST00000553772 APAF1O14727 1248 aa26.26■■□□□ 1.79
COCH-206ENST00000553772 CICQ96RK0 1608 aaPredicted RBP26.25■■□□□ 1.79
COCH-206ENST00000553772 NCBP3Q53F19 620 aaKnown RBP26.24■■□□□ 1.79
COCH-206ENST00000553772 RRP7AQ9Y3A4 280 aaKnown RBP26.24■■□□□ 1.79
COCH-206ENST00000553772 TAF7Q15545 349 aaPredicted RBP26.23■■□□□ 1.79
COCH-206ENST00000553772 TRIM35Q9UPQ4 493 aa26.23■■□□□ 1.79
COCH-206ENST00000553772 BTBD11A6QL63 1104 aa26.22■■□□□ 1.79
COCH-206ENST00000553772 SLC39A6Q13433 755 aa26.22■■□□□ 1.79
COCH-206ENST00000553772 NEUROD2Q15784 382 aa26.22■■□□□ 1.79
COCH-206ENST00000553772 ZNF790Q6PG37 636 aa26.22■■□□□ 1.79
COCH-206ENST00000553772 FAM9BQ8IZU0 186 aa26.22■■□□□ 1.79
COCH-206ENST00000553772 MIER1Q8N108 512 aa26.22■■□□□ 1.79
COCH-206ENST00000553772 KCPQ6ZWJ8 1503 aa26.22■■□□□ 1.79
COCH-206ENST00000553772 ATP6V1AP38606 617 aa26.21■■□□□ 1.79
COCH-206ENST00000553772 KCNQ4P56696 695 aa26.21■■□□□ 1.79
COCH-206ENST00000553772 TTC5Q8N0Z6 440 aa26.21■■□□□ 1.79
COCH-206ENST00000553772 RBM42Q9BTD8 480 aaKnown RBP26.21■■□□□ 1.79
COCH-206ENST00000553772 ANO8Q9HCE9 1232 aaPredicted RBP26.21■■□□□ 1.79
COCH-206ENST00000553772 STK32BQ9NY57 414 aa26.21■■□□□ 1.79
COCH-206ENST00000553772 SLC15A2Q16348 729 aa26.2■■□□□ 1.78
COCH-206ENST00000553772 SLC4A9Q96Q91 983 aa26.2■■□□□ 1.78
COCH-206ENST00000553772 PTCD1O75127 700 aaKnown RBP26.19■■□□□ 1.78
COCH-206ENST00000553772 VSIG10Q8N0Z9 540 aa26.19■■□□□ 1.78
COCH-206ENST00000553772 AKT1S1Q96B36 256 aa26.19■■□□□ 1.78
COCH-206ENST00000553772 THUMPD2Q9BTF0 503 aaKnown RBP26.19■■□□□ 1.78
COCH-206ENST00000553772 COL5A3P25940 1745 aaPredicted RBP26.19■■□□□ 1.78
COCH-206ENST00000553772 QSER1Q2KHR3 1735 aa26.19■■□□□ 1.78
COCH-206ENST00000553772 KDM3BQ7LBC6 1761 aa26.18■■□□□ 1.78
COCH-206ENST00000553772 C4BP0C0L5 1744 aa26.18■■□□□ 1.78
COCH-206ENST00000553772 ITPK1Q13572 414 aa26.18■■□□□ 1.78
COCH-206ENST00000553772 BABAM1Q9NWV8 329 aa26.18■■□□□ 1.78
COCH-206ENST00000553772 CCDC27Q2M243 656 aa26.17■■□□□ 1.78
COCH-206ENST00000553772 TJP1Q07157 1748 aa26.17■■□□□ 1.78
COCH-206ENST00000553772 R3HDM1Q15032 1099 aaKnown RBP26.16■■□□□ 1.78
COCH-206ENST00000553772 ZNF827Q17R98 1081 aa26.15■■□□□ 1.78
COCH-206ENST00000553772 NGEFQ8N5V2 710 aa26.15■■□□□ 1.78
COCH-206ENST00000553772 LINC00116Q8NCU8 138 aa26.15■■□□□ 1.78
COCH-206ENST00000553772 ZNF496Q96IT1 587 aaPredicted RBP26.14■■□□□ 1.78
COCH-206ENST00000553772 FMNL2Q96PY5 1086 aa26.14■■□□□ 1.78
COCH-206ENST00000553772 TUBGCP6Q96RT7 1819 aa26.14■■□□□ 1.77
COCH-206ENST00000553772 HEG1Q9ULI3 1381 aa26.13■■□□□ 1.77
COCH-206ENST00000553772 CALD1Q05682 793 aaKnown RBP26.13■■□□□ 1.77
COCH-206ENST00000553772 KCNQ3O43525 872 aa26.12■■□□□ 1.77
COCH-206ENST00000553772 RC3H1Q5TC82 1133 aaKnown RBP26.12■■□□□ 1.77
COCH-206ENST00000553772 UBR3Q6ZT12 1888 aa26.12■■□□□ 1.77
COCH-206ENST00000553772 CNTNAP4Q9C0A0 1308 aa26.12■■□□□ 1.77
COCH-206ENST00000553772 MYH14Q7Z406 1995 aaKnown RBP26.11■■□□□ 1.77
COCH-206ENST00000553772 PSDA5PKW4 1024 aaPredicted RBP26.11■■□□□ 1.77
COCH-206ENST00000553772 TEX13AQ9BXU3 409 aaPredicted RBP26.11■■□□□ 1.77
COCH-206ENST00000553772 AK7Q96M32 723 aa26.1■■□□□ 1.77
COCH-206ENST00000553772 MIS18AQ9NYP9 233 aa26.1■■□□□ 1.77
COCH-206ENST00000553772 TFCP2L1Q9NZI6 479 aa26.1■■□□□ 1.77
COCH-206ENST00000553772 CHL1O00533 1208 aa26.09■■□□□ 1.77
COCH-206ENST00000553772 DNAJC10Q8IXB1 793 aa26.09■■□□□ 1.77
COCH-206ENST00000553772 TSPYL4Q9UJ04 414 aa26.09■■□□□ 1.77
COCH-206ENST00000553772 CASZ1Q86V15 1759 aa26.09■■□□□ 1.77
COCH-206ENST00000553772 WWC1Q8IX03 1113 aa26.08■■□□□ 1.77
COCH-206ENST00000553772 CFAP44Q96MT7 982 aa26.08■■□□□ 1.77
COCH-206ENST00000553772 FLAD1Q8NFF5 587 aa26.07■■□□□ 1.76
COCH-206ENST00000553772 SNRPA1P09661 255 aaKnown RBP26.06■■□□□ 1.76
COCH-206ENST00000553772 CYP19A1P11511 503 aaPredicted RBP26.06■■□□□ 1.76
COCH-206ENST00000553772 EIF4A1P60842 406 aaKnown RBP26.06■■□□□ 1.76
COCH-206ENST00000553772 IFT57Q9NWB7 429 aa26.06■■□□□ 1.76
COCH-206ENST00000553772 PNPLA7Q6ZV29 1317 aa26.06■■□□□ 1.76
COCH-206ENST00000553772 STARD3NLO95772 234 aa26.05■■□□□ 1.76
COCH-206ENST00000553772 ZNF853P0CG23 659 aa26.05■■□□□ 1.76
COCH-206ENST00000553772 SSFA2P28290 1259 aa26.05■■□□□ 1.76
COCH-206ENST00000553772 CRKLP46109 303 aaKnown RBP26.05■■□□□ 1.76
COCH-206ENST00000553772 GNAI1P63096 354 aa26.04■■□□□ 1.76
COCH-206ENST00000553772 GNPATO15228 680 aa26.03■■□□□ 1.76
COCH-206ENST00000553772 IL16Q14005 1332 aa26.03■■□□□ 1.76
COCH-206ENST00000553772 LAMB4A4D0S4 1761 aa26.02■■□□□ 1.76
COCH-206ENST00000553772 RPS6KA4O75676 772 aa26.02■■□□□ 1.76
COCH-206ENST00000553772 INTS5Q6P9B9 1019 aaKnown RBP26.02■■□□□ 1.76
COCH-206ENST00000553772 WDR63Q8IWG1 891 aa26.02■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms