RNA–Protein interactions for RNA: ENST00000553619.1

VTI1B-202, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-202ENST00000553619 AGLP35573 1532 aa7.17□□□□□ -1.26
VTI1B-202ENST00000553619 FRMPD1Q5SYB0 1578 aa7.17□□□□□ -1.26
VTI1B-202ENST00000553619 REREQ9P2R6 1566 aa7.17□□□□□ -1.26
VTI1B-202ENST00000553619 PER1O15534 1290 aaPredicted RBP7.17□□□□□ -1.26
VTI1B-202ENST00000553619 WIPF1O43516 503 aa7.17□□□□□ -1.26
VTI1B-202ENST00000553619 PDE4DQ08499 809 aa7.17□□□□□ -1.26
VTI1B-202ENST00000553619 NNTQ13423 1086 aa7.17□□□□□ -1.26
VTI1B-202ENST00000553619 MYSM1Q5VVJ2 828 aa7.17□□□□□ -1.26
VTI1B-202ENST00000553619 FOXJ1Q92949 421 aa7.17□□□□□ -1.26
VTI1B-202ENST00000553619 LIMD1Q9UGP4 676 aa7.17□□□□□ -1.26
VTI1B-202ENST00000553619 BCORL1Q5H9F3 1711 aa7.17□□□□□ -1.26
VTI1B-202ENST00000553619 ANKRD30BQ9BXX2 1392 aa7.17□□□□□ -1.26
VTI1B-202ENST00000553619 PZPP20742 1482 aa7.17□□□□□ -1.26
VTI1B-202ENST00000553619 FAM135AQ9P2D6 1515 aa7.17□□□□□ -1.26
VTI1B-202ENST00000553619 IQGAP3Q86VI3 1631 aa7.16□□□□□ -1.26
VTI1B-202ENST00000553619 ABCA6Q8N139 1617 aa7.16□□□□□ -1.26
VTI1B-202ENST00000553619 QPCTQ16769 361 aa7.16□□□□□ -1.26
VTI1B-202ENST00000553619 PRPF38BQ5VTL8 546 aaKnown RBP7.16□□□□□ -1.26
VTI1B-202ENST00000553619 SIN3AQ96ST3 1273 aa7.16□□□□□ -1.26
VTI1B-202ENST00000553619 SLC24A3Q9HC58 644 aa7.16□□□□□ -1.26
VTI1B-202ENST00000553619 DEPDC5O75140 1603 aa7.16□□□□□ -1.26
VTI1B-202ENST00000553619 PLEKHG3A1L390 1219 aa7.15□□□□□ -1.26
VTI1B-202ENST00000553619 MPNDQ8N594 471 aa7.15□□□□□ -1.26
VTI1B-202ENST00000553619 TONSLQ96HA7 1378 aa7.15□□□□□ -1.26
VTI1B-202ENST00000553619 RNF17Q9BXT8 1623 aaKnown RBP7.15□□□□□ -1.27
VTI1B-202ENST00000553619 TET3O43151 1660 aa7.14□□□□□ -1.27
VTI1B-202ENST00000553619 TIMP2P16035 220 aa7.14□□□□□ -1.27
VTI1B-202ENST00000553619 MLECQ14165 292 aa7.14□□□□□ -1.27
VTI1B-202ENST00000553619 C4orf48Q5BLP8 95 aa7.14□□□□□ -1.27
VTI1B-202ENST00000553619 LMTK2Q8IWU2 1503 aa7.14□□□□□ -1.27
VTI1B-202ENST00000553619 FAM174AQ8TBP5 190 aa7.14□□□□□ -1.27
VTI1B-202ENST00000553619 TSC1Q92574 1164 aa7.14□□□□□ -1.27
VTI1B-202ENST00000553619 ZFP42Q96MM3 310 aa7.14□□□□□ -1.27
VTI1B-202ENST00000553619 VWDEQ8N2E2 1590 aa7.13□□□□□ -1.27
VTI1B-202ENST00000553619 PRDM15P57071 1507 aaPredicted RBP7.13□□□□□ -1.27
VTI1B-202ENST00000553619 ARHGEF40Q8TER5 1519 aa7.13□□□□□ -1.27
VTI1B-202ENST00000553619 RPRD2Q5VT52 1461 aaKnown RBP7.13□□□□□ -1.27
VTI1B-202ENST00000553619 CCDC144AA2RUR9 1427 aa7.13□□□□□ -1.27
VTI1B-202ENST00000553619 PPP1R15AO75807 674 aaPredicted RBP7.13□□□□□ -1.27
VTI1B-202ENST00000553619 ADH1CP00326 375 aa7.13□□□□□ -1.27
VTI1B-202ENST00000553619 WDR4P57081 412 aaKnown RBP7.13□□□□□ -1.27
VTI1B-202ENST00000553619 ZC3H13Q5T200 1668 aaKnown RBP7.12□□□□□ -1.27
VTI1B-202ENST00000553619 ARHGAP31Q2M1Z3 1444 aa7.12□□□□□ -1.27
VTI1B-202ENST00000553619 CNTLNQ9NXG0 1405 aa7.12□□□□□ -1.27
VTI1B-202ENST00000553619 CFAP65Q6ZU64 1925 aaKnown RBP7.12□□□□□ -1.27
VTI1B-202ENST00000553619 NUTM2BA6NNL0 878 aaPredicted RBP7.12□□□□□ -1.27
VTI1B-202ENST00000553619 NUTM2EB1AL46 878 aaPredicted RBP7.12□□□□□ -1.27
VTI1B-202ENST00000553619 VEGFBP49765 207 aa7.12□□□□□ -1.27
VTI1B-202ENST00000553619 ARID5BQ14865 1188 aa7.12□□□□□ -1.27
VTI1B-202ENST00000553619 NUTM2DQ5VT03 806 aaPredicted RBP7.12□□□□□ -1.27
VTI1B-202ENST00000553619 NUTM2AQ8IVF1 878 aaPredicted RBP7.12□□□□□ -1.27
VTI1B-202ENST00000553619 SLC52A1Q9NWF4 448 aa7.12□□□□□ -1.27
VTI1B-202ENST00000553619 NXF1Q9UBU9 619 aaKnown RBP7.12□□□□□ -1.27
VTI1B-202ENST00000553619 LILRB3O75022 631 aa7.11□□□□□ -1.27
VTI1B-202ENST00000553619 INSM1Q01101 510 aaPredicted RBP7.11□□□□□ -1.27
VTI1B-202ENST00000553619 TUSC1Q2TAM9 212 aa7.11□□□□□ -1.27
VTI1B-202ENST00000553619 RTL5Q5HYW3 569 aaPredicted RBP7.11□□□□□ -1.27
VTI1B-202ENST00000553619 MRPL14Q6P1L8 145 aaKnown RBP7.11□□□□□ -1.27
VTI1B-202ENST00000553619 CDK15Q96Q40 435 aa7.11□□□□□ -1.27
VTI1B-202ENST00000553619 PURBQ96QR8 312 aaKnown RBP7.11□□□□□ -1.27
VTI1B-202ENST00000553619 KLF16Q9BXK1 252 aaPredicted RBP7.11□□□□□ -1.27
VTI1B-202ENST00000553619 RSPH6AQ9H0K4 717 aa7.11□□□□□ -1.27
VTI1B-202ENST00000553619 PTPRTO14522 1441 aa7.1□□□□□ -1.27
VTI1B-202ENST00000553619 CEP152O94986 1710 aa7.1□□□□□ -1.27
VTI1B-202ENST00000553619 MROH1Q8NDA8 1641 aa7.1□□□□□ -1.27
VTI1B-202ENST00000553619 NR3C2P08235 984 aa7.1□□□□□ -1.27
VTI1B-202ENST00000553619 AGERQ15109 404 aa7.1□□□□□ -1.27
VTI1B-202ENST00000553619 L3MBTL2Q969R5 705 aa7.1□□□□□ -1.27
VTI1B-202ENST00000553619 ZFAND3Q9H8U3 227 aa7.1□□□□□ -1.27
VTI1B-202ENST00000553619 STK17AQ9UEE5 414 aa7.1□□□□□ -1.27
VTI1B-202ENST00000553619 ABCC3O15438 1527 aa7.1□□□□□ -1.27
VTI1B-202ENST00000553619 E9PCH4 1651 aa7.09□□□□□ -1.27
VTI1B-202ENST00000553619 ZMYM3Q14202 1370 aa7.09□□□□□ -1.27
VTI1B-202ENST00000553619 RPGRIP1LQ68CZ1 1315 aa7.09□□□□□ -1.27
VTI1B-202ENST00000553619 CLK2P49760 499 aaKnown RBP7.09□□□□□ -1.27
VTI1B-202ENST00000553619 SLC16A10Q8TF71 515 aa7.09□□□□□ -1.27
VTI1B-202ENST00000553619 EFCAB6Q5THR3 1501 aa7.08□□□□□ -1.28
VTI1B-202ENST00000553619 SPHKAPQ2M3C7 1700 aa7.08□□□□□ -1.28
VTI1B-202ENST00000553619 SOBPA7XYQ1 873 aa7.08□□□□□ -1.28
VTI1B-202ENST00000553619 ZIC2O95409 532 aaPredicted RBP7.08□□□□□ -1.28
VTI1B-202ENST00000553619 GMPRP36959 345 aa7.08□□□□□ -1.28
VTI1B-202ENST00000553619 SCARF1Q14162 830 aa7.08□□□□□ -1.28
VTI1B-202ENST00000553619 RGL3Q3MIN7 710 aa7.08□□□□□ -1.28
VTI1B-202ENST00000553619 BPHLQ86WA6 291 aaPredicted RBP7.08□□□□□ -1.28
VTI1B-202ENST00000553619 HELBQ8NG08 1087 aaPredicted RBP7.08□□□□□ -1.28
VTI1B-202ENST00000553619 DCAF11Q8TEB1 546 aa7.08□□□□□ -1.28
VTI1B-202ENST00000553619 ITPKCQ96DU7 683 aa7.08□□□□□ -1.28
VTI1B-202ENST00000553619 C1QTNF2Q9BXJ5 285 aa7.08□□□□□ -1.28
VTI1B-202ENST00000553619 CAMSAP1Q5T5Y3 1602 aa7.08□□□□□ -1.28
VTI1B-202ENST00000553619 KIF1BO60333 1816 aa7.08□□□□□ -1.28
VTI1B-202ENST00000553619 H3BM21 787 aa7.07□□□□□ -1.28
VTI1B-202ENST00000553619 GRM5P41594 1212 aa7.07□□□□□ -1.28
VTI1B-202ENST00000553619 ZNF326Q5BKZ1 582 aaKnown RBP7.07□□□□□ -1.28
VTI1B-202ENST00000553619 POLR3EQ9NVU0 708 aa7.07□□□□□ -1.28
VTI1B-202ENST00000553619 NPATQ14207 1427 aa7.07□□□□□ -1.28
VTI1B-202ENST00000553619 TRPM2O94759 1503 aa7.06□□□□□ -1.28
VTI1B-202ENST00000553619 CLTCQ00610 1675 aaKnown RBP7.06□□□□□ -1.28
VTI1B-202ENST00000553619 ERBB4Q15303 1308 aa7.06□□□□□ -1.28
VTI1B-202ENST00000553619 PLA2R1Q13018 1463 aa7.06□□□□□ -1.28
VTI1B-202ENST00000553619 NR5A1Q13285 461 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms