RNA–Protein interactions for RNA: ENST00000553416.5

LINC01193-201, Transcript of long intergenic non-protein coding RNA 1193, humanhuman

TSL 1 (best) BASIC

Gene LINC01193, Length 3,401 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01193-201ENST00000553416 SPG7Q9UQ90 795 aa13.13□□□□□ -0.31
LINC01193-201ENST00000553416 ATP7BP35670 1465 aa13.13□□□□□ -0.31
LINC01193-201ENST00000553416 TMEM131LA2VDJ0 1609 aa13.13□□□□□ -0.31
LINC01193-201ENST00000553416 PIK3R4Q99570 1358 aa13.13□□□□□ -0.31
LINC01193-201ENST00000553416 CPA1P15085 419 aa13.13□□□□□ -0.31
LINC01193-201ENST00000553416 TAF7Q15545 349 aaPredicted RBP13.13□□□□□ -0.31
LINC01193-201ENST00000553416 LRRC59Q96AG4 307 aaKnown RBP13.13□□□□□ -0.31
LINC01193-201ENST00000553416 PRKCSHP14314 528 aaPredicted RBP13.12□□□□□ -0.31
LINC01193-201ENST00000553416 PRIM1P49642 420 aaKnown RBP13.12□□□□□ -0.31
LINC01193-201ENST00000553416 ESCO1Q5FWF5 840 aa13.12□□□□□ -0.31
LINC01193-201ENST00000553416 PPP1R42Q7Z4L9 355 aa13.12□□□□□ -0.31
LINC01193-201ENST00000553416 CPSF1Q10570 1443 aaKnown RBP13.12□□□□□ -0.31
LINC01193-201ENST00000553416 KCNQ3O43525 872 aa13.12□□□□□ -0.31
LINC01193-201ENST00000553416 PSME1Q06323 249 aa13.12□□□□□ -0.31
LINC01193-201ENST00000553416 ZSCAN23Q3MJ62 389 aa13.12□□□□□ -0.31
LINC01193-201ENST00000553416 IL17REQ8NFR9 667 aa13.11□□□□□ -0.31
LINC01193-201ENST00000553416 SIL1Q9H173 461 aa13.11□□□□□ -0.31
LINC01193-201ENST00000553416 LGR6Q9HBX8 967 aa13.11□□□□□ -0.31
LINC01193-201ENST00000553416 C9orf78Q9NZ63 289 aaPredicted RBP13.11□□□□□ -0.31
LINC01193-201ENST00000553416 USP32Q8NFA0 1604 aa13.11□□□□□ -0.31
LINC01193-201ENST00000553416 PI4KAP2A4QPH2 592 aa13.11□□□□□ -0.31
LINC01193-201ENST00000553416 KLHL40Q2TBA0 621 aa13.11□□□□□ -0.31
LINC01193-201ENST00000553416 PI4KAP1Q8N8J0 262 aa13.11□□□□□ -0.31
LINC01193-201ENST00000553416 NSFL1CQ9UNZ2 370 aaKnown RBP13.11□□□□□ -0.31
LINC01193-201ENST00000553416 PREX1Q8TCU6 1659 aa13.11□□□□□ -0.31
LINC01193-201ENST00000553416 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.11□□□□□ -0.31
LINC01193-201ENST00000553416 KCNA6P17658 529 aa13.11□□□□□ -0.31
LINC01193-201ENST00000553416 ESYT1Q9BSJ8 1104 aa13.11□□□□□ -0.31
LINC01193-201ENST00000553416 SRCIN1Q9C0H9 1055 aa13.11□□□□□ -0.31
LINC01193-201ENST00000553416 MED14O60244 1454 aa13.11□□□□□ -0.31
LINC01193-201ENST00000553416 DDIT3P35638 169 aa13.1□□□□□ -0.31
LINC01193-201ENST00000553416 JARID2Q92833 1246 aaPredicted RBP13.1□□□□□ -0.31
LINC01193-201ENST00000553416 CHPF2Q9P2E5 772 aa13.1□□□□□ -0.31
LINC01193-201ENST00000553416 AATKQ6ZMQ8 1374 aa13.1□□□□□ -0.31
LINC01193-201ENST00000553416 CDK12Q9NYV4 1490 aaPredicted RBP13.1□□□□□ -0.31
LINC01193-201ENST00000553416 PTMSP20962 102 aa13.1□□□□□ -0.31
LINC01193-201ENST00000553416 NBPF7P0C2Y1 421 aaPredicted RBP13.1□□□□□ -0.31
LINC01193-201ENST00000553416 DNTTIP2Q5QJE6 756 aaKnown RBP13.09□□□□□ -0.31
LINC01193-201ENST00000553416 ZNF530Q6P9A1 599 aaPredicted RBP13.09□□□□□ -0.31
LINC01193-201ENST00000553416 RBSNQ9H1K0 784 aa13.09□□□□□ -0.31
LINC01193-201ENST00000553416 PA2G4Q9UQ80 394 aaKnown RBP13.09□□□□□ -0.31
LINC01193-201ENST00000553416 TMEM2Q9UHN6 1383 aa13.09□□□□□ -0.31
LINC01193-201ENST00000553416 LMBRD1Q9NUN5 540 aa13.09□□□□□ -0.31
LINC01193-201ENST00000553416 FIBPO43427 364 aa13.09□□□□□ -0.31
LINC01193-201ENST00000553416 CLCN1P35523 988 aa13.09□□□□□ -0.31
LINC01193-201ENST00000553416 SETD1BQ9UPS6 1966 aaKnown RBP13.08□□□□□ -0.32
LINC01193-201ENST00000553416 CHMLP26374 656 aa13.08□□□□□ -0.32
LINC01193-201ENST00000553416 HOXC9P31274 260 aa13.08□□□□□ -0.32
LINC01193-201ENST00000553416 PIP4K2AP48426 406 aaPredicted RBP13.08□□□□□ -0.32
LINC01193-201ENST00000553416 DIAPH3Q9NSV4 1193 aa13.08□□□□□ -0.32
LINC01193-201ENST00000553416 VIRMAQ69YN4 1812 aaKnown RBP13.08□□□□□ -0.32
LINC01193-201ENST00000553416 ATP8B2P98198 1209 aa13.08□□□□□ -0.32
LINC01193-201ENST00000553416 USP44Q9H0E7 712 aa13.08□□□□□ -0.32
LINC01193-201ENST00000553416 PPP6R1Q9UPN7 881 aa13.08□□□□□ -0.32
LINC01193-201ENST00000553416 FLT4P35916 1363 aa13.08□□□□□ -0.32
LINC01193-201ENST00000553416 PLEKHG3A1L390 1219 aa13.07□□□□□ -0.32
LINC01193-201ENST00000553416 RBM10P98175 930 aaKnown RBP13.07□□□□□ -0.32
LINC01193-201ENST00000553416 TCEANC2Q96MN5 208 aa13.07□□□□□ -0.32
LINC01193-201ENST00000553416 CWC22Q9HCG8 908 aaKnown RBP13.07□□□□□ -0.32
LINC01193-201ENST00000553416 ATP10DQ9P241 1426 aa13.07□□□□□ -0.32
LINC01193-201ENST00000553416 VPS37CA5D8V6 355 aaPredicted RBP13.07□□□□□ -0.32
LINC01193-201ENST00000553416 GPT2Q8TD30 523 aa13.07□□□□□ -0.32
LINC01193-201ENST00000553416 IL25Q9H293 177 aa13.07□□□□□ -0.32
LINC01193-201ENST00000553416 R3HCC1Q9Y3T6 440 aaKnown RBP13.07□□□□□ -0.32
LINC01193-201ENST00000553416 CLTCQ00610 1675 aaKnown RBP13.06□□□□□ -0.32
LINC01193-201ENST00000553416 BTBD11A6QL63 1104 aa13.06□□□□□ -0.32
LINC01193-201ENST00000553416 CCDC173Q0VFZ6 552 aa13.06□□□□□ -0.32
LINC01193-201ENST00000553416 TMEM63CQ9P1W3 806 aa13.06□□□□□ -0.32
LINC01193-201ENST00000553416 MYL6BP14649 208 aa13.06□□□□□ -0.32
LINC01193-201ENST00000553416 HSP90AA2PQ14568 343 aaPredicted RBP13.06□□□□□ -0.32
LINC01193-201ENST00000553416 CWF19L2Q2TBE0 894 aaKnown RBP13.06□□□□□ -0.32
LINC01193-201ENST00000553416 RHPN1Q8TCX5 695 aa13.06□□□□□ -0.32
LINC01193-201ENST00000553416 NAP1L2Q9ULW6 460 aaPredicted RBP13.06□□□□□ -0.32
LINC01193-201ENST00000553416 ZDHHC9Q9Y397 364 aa13.06□□□□□ -0.32
LINC01193-201ENST00000553416 IFIT2P09913 472 aaKnown RBP13.06□□□□□ -0.32
LINC01193-201ENST00000553416 USP6P35125 1406 aa13.05□□□□□ -0.32
LINC01193-201ENST00000553416 C1orf141Q5JVX7 400 aa13.05□□□□□ -0.32
LINC01193-201ENST00000553416 FOSBP53539 338 aa13.05□□□□□ -0.32
LINC01193-201ENST00000553416 ZC3H6P61129 1189 aaKnown RBP13.05□□□□□ -0.32
LINC01193-201ENST00000553416 CCDC8Q9H0W5 538 aaPredicted RBP13.05□□□□□ -0.32
LINC01193-201ENST00000553416 PRAMEF22A3QJZ6 481 aa13.04□□□□□ -0.32
LINC01193-201ENST00000553416 GADD45BO75293 160 aaPredicted RBP13.04□□□□□ -0.32
LINC01193-201ENST00000553416 NBPF6Q5VWK0 638 aa13.04□□□□□ -0.32
LINC01193-201ENST00000553416 FERMT3Q86UX7 667 aa13.04□□□□□ -0.32
LINC01193-201ENST00000553416 NBPF4Q96M43 638 aa13.04□□□□□ -0.32
LINC01193-201ENST00000553416 CASTP20810 708 aaKnown RBP13.04□□□□□ -0.32
LINC01193-201ENST00000553416 KIAA0232Q92628 1395 aa13.04□□□□□ -0.32
LINC01193-201ENST00000553416 PRPF40BQ6NWY9 871 aaKnown RBP13.04□□□□□ -0.32
LINC01193-201ENST00000553416 CCDC83Q8IWF9 413 aa13.04□□□□□ -0.32
LINC01193-201ENST00000553416 DNAAF4Q8WXU2 420 aa13.04□□□□□ -0.32
LINC01193-201ENST00000553416 NCOA3Q9Y6Q9 1424 aa13.03□□□□□ -0.32
LINC01193-201ENST00000553416 THEMISQ8N1K5 641 aaPredicted RBP13.03□□□□□ -0.32
LINC01193-201ENST00000553416 CLASRPQ8N2M8 674 aaKnown RBP13.03□□□□□ -0.32
LINC01193-201ENST00000553416 KLHDC4Q8TBB5 520 aa13.03□□□□□ -0.32
LINC01193-201ENST00000553416 SMC3Q9UQE7 1217 aa13.03□□□□□ -0.32
LINC01193-201ENST00000553416 ZNF330Q9Y3S2 320 aaPredicted RBP13.03□□□□□ -0.32
LINC01193-201ENST00000553416 SOS1Q07889 1333 aaPredicted RBP13.03□□□□□ -0.32
LINC01193-201ENST00000553416 PPFIA3O75145 1194 aa13.03□□□□□ -0.32
LINC01193-201ENST00000553416 STK3Q13188 491 aa13.03□□□□□ -0.32
LINC01193-201ENST00000553416 SLC39A6Q13433 755 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms