RNA–Protein interactions for RNA: ENST00000550964.5

PFDN5-213, Transcript of prefoldin subunit 5, humanhuman

TSL 2

Gene PFDN5, Length 596 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-213ENST00000550964 PTF1AQ7RTS3 328 aa13.23□□□□□ -0.29
PFDN5-213ENST00000550964 TTC5Q8N0Z6 440 aa13.23□□□□□ -0.29
PFDN5-213ENST00000550964 PNISRQ8TF01 805 aaKnown RBP13.23□□□□□ -0.29
PFDN5-213ENST00000550964 C5P01031 1676 aa13.23□□□□□ -0.29
PFDN5-213ENST00000550964 MRC1P22897 1456 aa13.23□□□□□ -0.29
PFDN5-213ENST00000550964 KDM6AO15550 1401 aaPredicted RBP13.22□□□□□ -0.29
PFDN5-213ENST00000550964 LOC102724428A0A0B4J2F2 783 aa13.22□□□□□ -0.29
PFDN5-213ENST00000550964 SIK1P57059 783 aa13.22□□□□□ -0.29
PFDN5-213ENST00000550964 PROM2Q8N271 834 aa13.22□□□□□ -0.29
PFDN5-213ENST00000550964 RUNDC1Q96C34 613 aa13.22□□□□□ -0.29
PFDN5-213ENST00000550964 R3HDM1Q15032 1099 aaKnown RBP13.21□□□□□ -0.29
PFDN5-213ENST00000550964 NFE2L2Q16236 605 aa13.21□□□□□ -0.29
PFDN5-213ENST00000550964 VSIG10Q8N0Z9 540 aa13.21□□□□□ -0.29
PFDN5-213ENST00000550964 SLC16A10Q8TF71 515 aa13.21□□□□□ -0.29
PFDN5-213ENST00000550964 PHACTR3Q96KR7 559 aa13.21□□□□□ -0.29
PFDN5-213ENST00000550964 PLEKHF1Q96S99 279 aa13.21□□□□□ -0.29
PFDN5-213ENST00000550964 TEX13AQ9BXU3 409 aaPredicted RBP13.21□□□□□ -0.29
PFDN5-213ENST00000550964 SIPA1L3O60292 1781 aaPredicted RBP13.21□□□□□ -0.29
PFDN5-213ENST00000550964 CEMIPQ8WUJ3 1361 aa13.2□□□□□ -0.3
PFDN5-213ENST00000550964 ATP6V1AP38606 617 aa13.2□□□□□ -0.3
PFDN5-213ENST00000550964 ATG3Q9NT62 314 aa13.2□□□□□ -0.3
PFDN5-213ENST00000550964 TFCP2L1Q9NZI6 479 aa13.2□□□□□ -0.3
PFDN5-213ENST00000550964 PAPPAQ13219 1627 aa13.2□□□□□ -0.3
PFDN5-213ENST00000550964 CICQ96RK0 1608 aaPredicted RBP13.2□□□□□ -0.3
PFDN5-213ENST00000550964 CALD1Q05682 793 aaKnown RBP13.19□□□□□ -0.3
PFDN5-213ENST00000550964 AK7Q96M32 723 aa13.19□□□□□ -0.3
PFDN5-213ENST00000550964 RBM42Q9BTD8 480 aaKnown RBP13.19□□□□□ -0.3
PFDN5-213ENST00000550964 LGR6Q9HBX8 967 aa13.19□□□□□ -0.3
PFDN5-213ENST00000550964 MRS2Q9HD23 443 aa13.19□□□□□ -0.3
PFDN5-213ENST00000550964 BABAM1Q9NWV8 329 aa13.19□□□□□ -0.3
PFDN5-213ENST00000550964 ASAP1Q9ULH1 1129 aa13.19□□□□□ -0.3
PFDN5-213ENST00000550964 RC3H1Q5TC82 1133 aaKnown RBP13.18□□□□□ -0.3
PFDN5-213ENST00000550964 NGEFQ8N5V2 710 aa13.18□□□□□ -0.3
PFDN5-213ENST00000550964 LRRC4BQ9NT99 713 aa13.18□□□□□ -0.3
PFDN5-213ENST00000550964 ADAMTS8Q9UP79 889 aa13.18□□□□□ -0.3
PFDN5-213ENST00000550964 C4BP0C0L5 1744 aa13.18□□□□□ -0.3
PFDN5-213ENST00000550964 UBR2Q8IWV8 1755 aa13.17□□□□□ -0.3
PFDN5-213ENST00000550964 BTBD11A6QL63 1104 aa13.17□□□□□ -0.3
PFDN5-213ENST00000550964 RIPK4P57078 832 aa13.17□□□□□ -0.3
PFDN5-213ENST00000550964 TAF7Q15545 349 aaPredicted RBP13.17□□□□□ -0.3
PFDN5-213ENST00000550964 NCBP3Q53F19 620 aaKnown RBP13.17□□□□□ -0.3
PFDN5-213ENST00000550964 IL17REQ8NFR9 667 aa13.17□□□□□ -0.3
PFDN5-213ENST00000550964 AKT1S1Q96B36 256 aa13.17□□□□□ -0.3
PFDN5-213ENST00000550964 SPON1Q9HCB6 807 aa13.17□□□□□ -0.3
PFDN5-213ENST00000550964 COL5A3P25940 1745 aaPredicted RBP13.16□□□□□ -0.3
PFDN5-213ENST00000550964 PSDA5PKW4 1024 aaPredicted RBP13.16□□□□□ -0.3
PFDN5-213ENST00000550964 STARD3NLO95772 234 aa13.16□□□□□ -0.3
PFDN5-213ENST00000550964 ADRA2BP18089 450 aa13.16□□□□□ -0.3
PFDN5-213ENST00000550964 SSFA2P28290 1259 aa13.16□□□□□ -0.3
PFDN5-213ENST00000550964 ZNF790Q6PG37 636 aa13.16□□□□□ -0.3
PFDN5-213ENST00000550964 NPM2Q86SE8 214 aaKnown RBP13.16□□□□□ -0.3
PFDN5-213ENST00000550964 FMNL2Q96PY5 1086 aa13.16□□□□□ -0.3
PFDN5-213ENST00000550964 CHMP4AQ9BY43 222 aa13.16□□□□□ -0.3
PFDN5-213ENST00000550964 LRP5O75197 1615 aa13.16□□□□□ -0.3
PFDN5-213ENST00000550964 PTCD1O75127 700 aaKnown RBP13.15□□□□□ -0.3
PFDN5-213ENST00000550964 TMPOP42166 694 aaKnown RBP13.15□□□□□ -0.3
PFDN5-213ENST00000550964 MTFR1LQ9H019 292 aa13.15□□□□□ -0.3
PFDN5-213ENST00000550964 CNTNAP4Q9C0A0 1308 aa13.14□□□□□ -0.31
PFDN5-213ENST00000550964 UBR3Q6ZT12 1888 aa13.14□□□□□ -0.31
PFDN5-213ENST00000550964 RTCBQ9Y3I0 505 aaKnown RBP13.14□□□□□ -0.31
PFDN5-213ENST00000550964 CASZ1Q86V15 1759 aa13.14□□□□□ -0.31
PFDN5-213ENST00000550964 MCM10Q7L590 875 aa13.13□□□□□ -0.31
PFDN5-213ENST00000550964 ANO8Q9HCE9 1232 aaPredicted RBP13.13□□□□□ -0.31
PFDN5-213ENST00000550964 TUBGCP6Q96RT7 1819 aa13.13□□□□□ -0.31
PFDN5-213ENST00000550964 CCER2I3L3R5 266 aa13.12□□□□□ -0.31
PFDN5-213ENST00000550964 POLD1P28340 1107 aa13.12□□□□□ -0.31
PFDN5-213ENST00000550964 TRAPPC3LQ5T215 181 aa13.12□□□□□ -0.31
PFDN5-213ENST00000550964 HEG1Q9ULI3 1381 aa13.11□□□□□ -0.31
PFDN5-213ENST00000550964 MSH5O43196 834 aa13.11□□□□□ -0.31
PFDN5-213ENST00000550964 RPS6KA4O75676 772 aa13.11□□□□□ -0.31
PFDN5-213ENST00000550964 SNRPA1P09661 255 aaKnown RBP13.11□□□□□ -0.31
PFDN5-213ENST00000550964 PPP1R1BQ9UD71 204 aaPredicted RBP13.11□□□□□ -0.31
PFDN5-213ENST00000550964 TJP1Q07157 1748 aa13.1□□□□□ -0.31
PFDN5-213ENST00000550964 KDM3BQ7LBC6 1761 aa13.1□□□□□ -0.31
PFDN5-213ENST00000550964 A0A087WZG4 1122 aa13.1□□□□□ -0.31
PFDN5-213ENST00000550964 GNPATO15228 680 aa13.1□□□□□ -0.31
PFDN5-213ENST00000550964 SLC39A6Q13433 755 aa13.1□□□□□ -0.31
PFDN5-213ENST00000550964 ZNF827Q17R98 1081 aa13.1□□□□□ -0.31
PFDN5-213ENST00000550964 CCDC146Q8IYE0 955 aa13.1□□□□□ -0.31
PFDN5-213ENST00000550964 CCDC87Q9NVE4 849 aa13.1□□□□□ -0.31
PFDN5-213ENST00000550964 KCPQ6ZWJ8 1503 aa13.09□□□□□ -0.31
PFDN5-213ENST00000550964 MYH14Q7Z406 1995 aaKnown RBP13.09□□□□□ -0.31
PFDN5-213ENST00000550964 RFC4P35249 363 aa13.09□□□□□ -0.31
PFDN5-213ENST00000550964 CRKLP46109 303 aaKnown RBP13.09□□□□□ -0.31
PFDN5-213ENST00000550964 KCNQ4P56696 695 aa13.09□□□□□ -0.31
PFDN5-213ENST00000550964 ITPK1Q13572 414 aa13.09□□□□□ -0.31
PFDN5-213ENST00000550964 NEUROD2Q15784 382 aa13.09□□□□□ -0.31
PFDN5-213ENST00000550964 CCDC27Q2M243 656 aa13.09□□□□□ -0.31
PFDN5-213ENST00000550964 DIEXFQ68CQ4 756 aaKnown RBP13.09□□□□□ -0.31
PFDN5-213ENST00000550964 LINC00116Q8NCU8 138 aa13.09□□□□□ -0.31
PFDN5-213ENST00000550964 PNPLA7Q6ZV29 1317 aa13.09□□□□□ -0.31
PFDN5-213ENST00000550964 COL24A1Q17RW2 1714 aa13.08□□□□□ -0.32
PFDN5-213ENST00000550964 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.08□□□□□ -0.32
PFDN5-213ENST00000550964 APAF1O14727 1248 aa13.08□□□□□ -0.32
PFDN5-213ENST00000550964 GNAI1P63096 354 aa13.08□□□□□ -0.32
PFDN5-213ENST00000550964 NLGN1Q8N2Q7 840 aa13.08□□□□□ -0.32
PFDN5-213ENST00000550964 ZNF496Q96IT1 587 aaPredicted RBP13.08□□□□□ -0.32
PFDN5-213ENST00000550964 TSPYL4Q9UJ04 414 aa13.08□□□□□ -0.32
PFDN5-213ENST00000550964 LAMB4A4D0S4 1761 aa13.07□□□□□ -0.32
PFDN5-213ENST00000550964 DCAF8L1A6NGE4 600 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms