RNA–Protein interactions for RNA: ENST00000550375.1

BRF1-217, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 3

Gene BRF1, Length 1,362 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-217ENST00000550375 TEFQ10587 303 aa22.65■■□□□ 1.22
BRF1-217ENST00000550375 THUMPD2Q9BTF0 503 aaKnown RBP22.65■■□□□ 1.22
BRF1-217ENST00000550375 SIPA1L3O60292 1781 aaPredicted RBP22.65■■□□□ 1.22
BRF1-217ENST00000550375 SRCAPQ6ZRS2 3230 aa22.64■■□□□ 1.22
BRF1-217ENST00000550375 MRC1P22897 1456 aa22.64■■□□□ 1.22
BRF1-217ENST00000550375 CEMIPQ8WUJ3 1361 aa22.64■■□□□ 1.21
BRF1-217ENST00000550375 LMOD3Q0VAK6 560 aa22.63■■□□□ 1.21
BRF1-217ENST00000550375 EZH2Q15910 746 aaKnown RBP22.63■■□□□ 1.21
BRF1-217ENST00000550375 ASAP1Q9ULH1 1129 aa22.63■■□□□ 1.21
BRF1-217ENST00000550375 TRIM35Q9UPQ4 493 aa22.63■■□□□ 1.21
BRF1-217ENST00000550375 PLSCR1O15162 318 aa22.62■■□□□ 1.21
BRF1-217ENST00000550375 CAMKK2Q96RR4 588 aa22.62■■□□□ 1.21
BRF1-217ENST00000550375 SALL2Q9Y467 1007 aaPredicted RBP22.62■■□□□ 1.21
BRF1-217ENST00000550375 ATG3Q9NT62 314 aa22.61■■□□□ 1.21
BRF1-217ENST00000550375 RGPD3A6NKT7 1758 aaPredicted RBP22.61■■□□□ 1.21
BRF1-217ENST00000550375 RGPD4Q7Z3J3 1758 aa22.61■■□□□ 1.21
BRF1-217ENST00000550375 LY75O60449 1722 aa22.6■■□□□ 1.21
BRF1-217ENST00000550375 PALLDQ8WX93 1383 aa22.6■■□□□ 1.21
BRF1-217ENST00000550375 SLC39A6Q13433 755 aa22.59■■□□□ 1.21
BRF1-217ENST00000550375 SMARCC1Q92922 1105 aaPredicted RBP22.59■■□□□ 1.21
BRF1-217ENST00000550375 PAPPAQ13219 1627 aa22.58■■□□□ 1.2
BRF1-217ENST00000550375 BTBD11A6QL63 1104 aa22.57■■□□□ 1.2
BRF1-217ENST00000550375 TXNRD1Q16881 649 aa22.57■■□□□ 1.2
BRF1-217ENST00000550375 PROM2Q8N271 834 aa22.57■■□□□ 1.2
BRF1-217ENST00000550375 RREB1Q92766 1687 aa22.57■■□□□ 1.2
BRF1-217ENST00000550375 KCNQ4P56696 695 aa22.56■■□□□ 1.2
BRF1-217ENST00000550375 TAF7Q15545 349 aaPredicted RBP22.56■■□□□ 1.2
BRF1-217ENST00000550375 RBM42Q9BTD8 480 aaKnown RBP22.56■■□□□ 1.2
BRF1-217ENST00000550375 MIS18AQ9NYP9 233 aa22.56■■□□□ 1.2
BRF1-217ENST00000550375 PTCD1O75127 700 aaKnown RBP22.55■■□□□ 1.2
BRF1-217ENST00000550375 TTC5Q8N0Z6 440 aa22.54■■□□□ 1.2
BRF1-217ENST00000550375 CCNL1Q9UK58 526 aaPredicted RBP22.54■■□□□ 1.2
BRF1-217ENST00000550375 NUP188Q5SRE5 1749 aa22.54■■□□□ 1.2
BRF1-217ENST00000550375 KCNQ3O43525 872 aa22.53■■□□□ 1.2
BRF1-217ENST00000550375 LAS1LQ9Y4W2 734 aaKnown RBP22.53■■□□□ 1.2
BRF1-217ENST00000550375 ZNF790Q6PG37 636 aa22.52■■□□□ 1.2
BRF1-217ENST00000550375 LRRC4BQ9NT99 713 aa22.52■■□□□ 1.2
BRF1-217ENST00000550375 UBR2Q8IWV8 1755 aa22.52■■□□□ 1.2
BRF1-217ENST00000550375 LOC102724428A0A0B4J2F2 783 aa22.51■■□□□ 1.19
BRF1-217ENST00000550375 SIK1P57059 783 aa22.51■■□□□ 1.19
BRF1-217ENST00000550375 CCDC27Q2M243 656 aa22.51■■□□□ 1.19
BRF1-217ENST00000550375 WWC1Q8IX03 1113 aa22.51■■□□□ 1.19
BRF1-217ENST00000550375 KDM3BQ7LBC6 1761 aa22.51■■□□□ 1.19
BRF1-217ENST00000550375 KCPQ6ZWJ8 1503 aa22.51■■□□□ 1.19
BRF1-217ENST00000550375 ATP6V1AP38606 617 aa22.5■■□□□ 1.19
BRF1-217ENST00000550375 SLC27A3Q5K4L6 730 aa22.5■■□□□ 1.19
BRF1-217ENST00000550375 TAF1LQ8IZX4 1826 aa22.5■■□□□ 1.19
BRF1-217ENST00000550375 SLC4A9Q96Q91 983 aa22.5■■□□□ 1.19
BRF1-217ENST00000550375 TSPYL4Q9UJ04 414 aa22.5■■□□□ 1.19
BRF1-217ENST00000550375 C5P01031 1676 aa22.49■■□□□ 1.19
BRF1-217ENST00000550375 NCBP3Q53F19 620 aaKnown RBP22.49■■□□□ 1.19
BRF1-217ENST00000550375 CALD1Q05682 793 aaKnown RBP22.48■■□□□ 1.19
BRF1-217ENST00000550375 ZNF496Q96IT1 587 aaPredicted RBP22.48■■□□□ 1.19
BRF1-217ENST00000550375 ITPK1Q13572 414 aa22.47■■□□□ 1.19
BRF1-217ENST00000550375 TJP1Q07157 1748 aa22.46■■□□□ 1.19
BRF1-217ENST00000550375 NGEFQ8N5V2 710 aa22.46■■□□□ 1.19
BRF1-217ENST00000550375 FMNL2Q96PY5 1086 aa22.46■■□□□ 1.19
BRF1-217ENST00000550375 ZNF831Q5JPB2 1677 aa22.45■■□□□ 1.18
BRF1-217ENST00000550375 CHL1O00533 1208 aa22.45■■□□□ 1.18
BRF1-217ENST00000550375 CFAP44Q96MT7 982 aa22.45■■□□□ 1.18
BRF1-217ENST00000550375 GNAI1P63096 354 aa22.44■■□□□ 1.18
BRF1-217ENST00000550375 LINC00116Q8NCU8 138 aa22.44■■□□□ 1.18
BRF1-217ENST00000550375 IFT57Q9NWB7 429 aa22.44■■□□□ 1.18
BRF1-217ENST00000550375 BABAM1Q9NWV8 329 aa22.44■■□□□ 1.18
BRF1-217ENST00000550375 HEG1Q9ULI3 1381 aa22.43■■□□□ 1.18
BRF1-217ENST00000550375 COL5A3P25940 1745 aaPredicted RBP22.43■■□□□ 1.18
BRF1-217ENST00000550375 NBPF14Q5TI25 921 aa22.43■■□□□ 1.18
BRF1-217ENST00000550375 DNAJC10Q8IXB1 793 aa22.43■■□□□ 1.18
BRF1-217ENST00000550375 ZNF853P0CG23 659 aa22.42■■□□□ 1.18
BRF1-217ENST00000550375 EIF4A1P60842 406 aaKnown RBP22.42■■□□□ 1.18
BRF1-217ENST00000550375 HNRNPUQ00839 825 aaKnown RBP eCLIP22.42■■□□□ 1.18
BRF1-217ENST00000550375 WDR63Q8IWG1 891 aa22.42■■□□□ 1.18
BRF1-217ENST00000550375 ANO8Q9HCE9 1232 aaPredicted RBP22.42■■□□□ 1.18
BRF1-217ENST00000550375 MBIPQ9NS73 344 aa22.42■■□□□ 1.18
BRF1-217ENST00000550375 C4BP0C0L5 1744 aa22.42■■□□□ 1.18
BRF1-217ENST00000550375 VSIG10Q8N0Z9 540 aa22.41■■□□□ 1.18
BRF1-217ENST00000550375 STK32BQ9NY57 414 aa22.41■■□□□ 1.18
BRF1-217ENST00000550375 PRAMEF22A3QJZ6 481 aa22.4■■□□□ 1.18
BRF1-217ENST00000550375 ZNF827Q17R98 1081 aa22.4■■□□□ 1.18
BRF1-217ENST00000550375 CICQ96RK0 1608 aaPredicted RBP22.4■■□□□ 1.18
BRF1-217ENST00000550375 IL16Q14005 1332 aa22.4■■□□□ 1.18
BRF1-217ENST00000550375 TSR2Q969E8 191 aaKnown RBP22.39■■□□□ 1.18
BRF1-217ENST00000550375 ZNF521Q96K83 1311 aa22.39■■□□□ 1.17
BRF1-217ENST00000550375 SNRPA1P09661 255 aaKnown RBP22.38■■□□□ 1.17
BRF1-217ENST00000550375 AKT1S1Q96B36 256 aa22.38■■□□□ 1.17
BRF1-217ENST00000550375 MYH14Q7Z406 1995 aaKnown RBP22.38■■□□□ 1.17
BRF1-217ENST00000550375 TUBGCP6Q96RT7 1819 aa22.38■■□□□ 1.17
BRF1-217ENST00000550375 SLC15A2Q16348 729 aa22.38■■□□□ 1.17
BRF1-217ENST00000550375 KRT24Q2M2I5 525 aa22.38■■□□□ 1.17
BRF1-217ENST00000550375 AK7Q96M32 723 aa22.38■■□□□ 1.17
BRF1-217ENST00000550375 SPINK5Q9NQ38 1064 aaPredicted RBP22.38■■□□□ 1.17
BRF1-217ENST00000550375 PSDA5PKW4 1024 aaPredicted RBP22.37■■□□□ 1.17
BRF1-217ENST00000550375 HMGB2P26583 209 aaKnown RBP22.37■■□□□ 1.17
BRF1-217ENST00000550375 R3HDM1Q15032 1099 aaKnown RBP22.37■■□□□ 1.17
BRF1-217ENST00000550375 USP16Q9Y5T5 823 aa22.37■■□□□ 1.17
BRF1-217ENST00000550375 GIGYF1O75420 1035 aaPredicted RBP22.36■■□□□ 1.17
BRF1-217ENST00000550375 CYP19A1P11511 503 aaPredicted RBP22.36■■□□□ 1.17
BRF1-217ENST00000550375 CRKLP46109 303 aaKnown RBP22.36■■□□□ 1.17
BRF1-217ENST00000550375 TEX13AQ9BXU3 409 aaPredicted RBP22.36■■□□□ 1.17
BRF1-217ENST00000550375 TFCP2L1Q9NZI6 479 aa22.36■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms