RNA–Protein interactions for RNA: ENST00000550268.2

AC027288.3-202, humanhuman

TSL 2 BASIC

Gene AC027288.3, Length 1,820 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC027288.3-202ENST00000550268 TRAK2O60296 914 aa17.82■□□□□ 0.44
AC027288.3-202ENST00000550268 CCT4P50991 539 aaKnown RBP17.82■□□□□ 0.44
AC027288.3-202ENST00000550268 RAB3GAP1Q15042 981 aa17.82■□□□□ 0.44
AC027288.3-202ENST00000550268 MEX3CQ5U5Q3 659 aaKnown RBP17.82■□□□□ 0.44
AC027288.3-202ENST00000550268 C1orf167Q5SNV9 1468 aa17.82■□□□□ 0.44
AC027288.3-202ENST00000550268 GOLGA6L3A6NEY3 463 aa17.82■□□□□ 0.44
AC027288.3-202ENST00000550268 CEP85Q6P2H3 762 aa17.82■□□□□ 0.44
AC027288.3-202ENST00000550268 C1orf115Q9H7X2 142 aa17.82■□□□□ 0.44
AC027288.3-202ENST00000550268 IGSF1Q8N6C5 1336 aa17.81■□□□□ 0.44
AC027288.3-202ENST00000550268 CASC1Q6TDU7 716 aa17.81■□□□□ 0.44
AC027288.3-202ENST00000550268 OSBPL3Q9H4L5 887 aa17.81■□□□□ 0.44
AC027288.3-202ENST00000550268 AEBP1Q8IUX7 1158 aa17.8■□□□□ 0.44
AC027288.3-202ENST00000550268 LRRC59Q96AG4 307 aaKnown RBP17.79■□□□□ 0.44
AC027288.3-202ENST00000550268 DCTN1Q14203 1278 aa17.79■□□□□ 0.44
AC027288.3-202ENST00000550268 RTF1Q92541 710 aaKnown RBP17.79■□□□□ 0.44
AC027288.3-202ENST00000550268 GSPT1P15170 499 aaKnown RBP17.78■□□□□ 0.44
AC027288.3-202ENST00000550268 MRE11P49959 708 aa17.78■□□□□ 0.44
AC027288.3-202ENST00000550268 PXDNLA1KZ92 1463 aa17.78■□□□□ 0.44
AC027288.3-202ENST00000550268 PIK3C2AO00443 1686 aa17.78■□□□□ 0.44
AC027288.3-202ENST00000550268 HSP90AB2PQ58FF8 381 aa17.77■□□□□ 0.44
AC027288.3-202ENST00000550268 ZNF772Q68DY9 489 aaPredicted RBP17.77■□□□□ 0.44
AC027288.3-202ENST00000550268 MAP3K19Q56UN5 1328 aa17.77■□□□□ 0.43
AC027288.3-202ENST00000550268 CHMP4AQ9BY43 222 aa17.77■□□□□ 0.43
AC027288.3-202ENST00000550268 FAM208AQ9UK61 1670 aaKnown RBP17.76■□□□□ 0.43
AC027288.3-202ENST00000550268 NUTM2BA6NNL0 878 aaPredicted RBP17.75■□□□□ 0.43
AC027288.3-202ENST00000550268 NUTM2EB1AL46 878 aaPredicted RBP17.75■□□□□ 0.43
AC027288.3-202ENST00000550268 TPRNQ4KMQ1 711 aa17.75■□□□□ 0.43
AC027288.3-202ENST00000550268 NUTM2AQ8IVF1 878 aaPredicted RBP17.75■□□□□ 0.43
AC027288.3-202ENST00000550268 TNPO1Q92973 898 aaKnown RBP17.75■□□□□ 0.43
AC027288.3-202ENST00000550268 USP26Q9BXU7 913 aa17.75■□□□□ 0.43
AC027288.3-202ENST00000550268 EPB41L2O43491 1005 aaKnown RBP17.75■□□□□ 0.43
AC027288.3-202ENST00000550268 REC8O95072 547 aa17.75■□□□□ 0.43
AC027288.3-202ENST00000550268 MCM10Q7L590 875 aa17.75■□□□□ 0.43
AC027288.3-202ENST00000550268 CWC22Q9HCG8 908 aaKnown RBP17.75■□□□□ 0.43
AC027288.3-202ENST00000550268 DDX17Q92841 729 aaKnown RBP17.74■□□□□ 0.43
AC027288.3-202ENST00000550268 MARF1Q9Y4F3 1742 aaKnown RBP17.74■□□□□ 0.43
AC027288.3-202ENST00000550268 IBTKQ9P2D0 1353 aaPredicted RBP17.74■□□□□ 0.43
AC027288.3-202ENST00000550268 TUBGCP6Q96RT7 1819 aa17.73■□□□□ 0.43
AC027288.3-202ENST00000550268 GOLGA6L22H0YM25 854 aa17.73■□□□□ 0.43
AC027288.3-202ENST00000550268 SLC4A2P04920 1241 aa17.73■□□□□ 0.43
AC027288.3-202ENST00000550268 GNAI3P08754 354 aa17.73■□□□□ 0.43
AC027288.3-202ENST00000550268 NUCB2P80303 420 aa17.73■□□□□ 0.43
AC027288.3-202ENST00000550268 MTHFSDQ2M296 383 aaKnown RBP17.73■□□□□ 0.43
AC027288.3-202ENST00000550268 SPRYD3Q8NCJ5 442 aa17.73■□□□□ 0.43
AC027288.3-202ENST00000550268 TSPYL4Q9UJ04 414 aa17.73■□□□□ 0.43
AC027288.3-202ENST00000550268 RGPD8O14715 1765 aaPredicted RBP17.73■□□□□ 0.43
AC027288.3-202ENST00000550268 CCDC30Q5VVM6 783 aa17.72■□□□□ 0.43
AC027288.3-202ENST00000550268 HSP90AA1P07900 732 aaKnown RBP17.72■□□□□ 0.43
AC027288.3-202ENST00000550268 ORAI2Q96SN7 254 aa17.72■□□□□ 0.43
AC027288.3-202ENST00000550268 STK31Q9BXU1 1019 aa17.72■□□□□ 0.43
AC027288.3-202ENST00000550268 SOS2Q07890 1332 aaPredicted RBP17.71■□□□□ 0.43
AC027288.3-202ENST00000550268 PLEKHG5O94827 1062 aa17.71■□□□□ 0.43
AC027288.3-202ENST00000550268 GNAI2P04899 355 aa17.71■□□□□ 0.43
AC027288.3-202ENST00000550268 XRCC6P12956 609 aaKnown RBP eCLIP17.71■□□□□ 0.43
AC027288.3-202ENST00000550268 AMPHP49418 695 aa17.7■□□□□ 0.42
AC027288.3-202ENST00000550268 NGDNQ8NEJ9 315 aaKnown RBP17.7■□□□□ 0.42
AC027288.3-202ENST00000550268 MEIS3Q99687 375 aa17.7■□□□□ 0.42
AC027288.3-202ENST00000550268 AOX1Q06278 1338 aa17.7■□□□□ 0.42
AC027288.3-202ENST00000550268 SDSP20132 328 aa17.7■□□□□ 0.42
AC027288.3-202ENST00000550268 IL17RAQ96F46 866 aa17.7■□□□□ 0.42
AC027288.3-202ENST00000550268 EYA1Q99502 592 aa17.7■□□□□ 0.42
AC027288.3-202ENST00000550268 SRCIN1Q9C0H9 1055 aa17.7■□□□□ 0.42
AC027288.3-202ENST00000550268 GNAT3A8MTJ3 354 aa17.69■□□□□ 0.42
AC027288.3-202ENST00000550268 ERC2O15083 957 aa17.69■□□□□ 0.42
AC027288.3-202ENST00000550268 ST18O60284 1047 aa17.69■□□□□ 0.42
AC027288.3-202ENST00000550268 COL22A1Q8NFW1 1626 aaPredicted RBP17.69■□□□□ 0.42
AC027288.3-202ENST00000550268 PHRF1Q9P1Y6 1649 aaKnown RBP17.69■□□□□ 0.42
AC027288.3-202ENST00000550268 AFF2P51816 1311 aa17.69■□□□□ 0.42
AC027288.3-202ENST00000550268 MCM2P49736 904 aa17.68■□□□□ 0.42
AC027288.3-202ENST00000550268 KRT24Q2M2I5 525 aa17.68■□□□□ 0.42
AC027288.3-202ENST00000550268 NPHP3Q7Z494 1330 aa17.67■□□□□ 0.42
AC027288.3-202ENST00000550268 SALL3Q9BXA9 1300 aa17.67■□□□□ 0.42
AC027288.3-202ENST00000550268 MAP3K5Q99683 1374 aa17.67■□□□□ 0.42
AC027288.3-202ENST00000550268 ATP8B2P98198 1209 aa17.67■□□□□ 0.42
AC027288.3-202ENST00000550268 ESCO1Q5FWF5 840 aa17.67■□□□□ 0.42
AC027288.3-202ENST00000550268 KIF1AQ12756 1690 aa17.67■□□□□ 0.42
AC027288.3-202ENST00000550268 CD2BP2O95400 341 aaKnown RBP17.66■□□□□ 0.42
AC027288.3-202ENST00000550268 HOXB7P09629 217 aa17.66■□□□□ 0.42
AC027288.3-202ENST00000550268 RXRBP28702 533 aa17.66■□□□□ 0.42
AC027288.3-202ENST00000550268 PDE1AP54750 535 aa17.66■□□□□ 0.42
AC027288.3-202ENST00000550268 GRPEL1Q9HAV7 217 aa17.66■□□□□ 0.42
AC027288.3-202ENST00000550268 STAP2Q9UGK3 403 aa17.66■□□□□ 0.42
AC027288.3-202ENST00000550268 CYP2E1P05181 493 aaPredicted RBP17.65■□□□□ 0.42
AC027288.3-202ENST00000550268 ANAPC15P60006 121 aa17.65■□□□□ 0.42
AC027288.3-202ENST00000550268 PXDNQ92626 1479 aa17.65■□□□□ 0.42
AC027288.3-202ENST00000550268 HOXC9P31274 260 aa17.65■□□□□ 0.42
AC027288.3-202ENST00000550268 TAF7Q15545 349 aaPredicted RBP17.65■□□□□ 0.42
AC027288.3-202ENST00000550268 KLHL40Q2TBA0 621 aa17.65■□□□□ 0.42
AC027288.3-202ENST00000550268 C16orf71Q8IYS4 520 aaPredicted RBP17.65■□□□□ 0.42
AC027288.3-202ENST00000550268 C8orf37Q96NL8 207 aa17.65■□□□□ 0.42
AC027288.3-202ENST00000550268 FLIIQ13045 1269 aa17.64■□□□□ 0.41
AC027288.3-202ENST00000550268 LRRCC1Q9C099 1032 aa17.63■□□□□ 0.41
AC027288.3-202ENST00000550268 G2E3Q7L622 706 aa17.63■□□□□ 0.41
AC027288.3-202ENST00000550268 RBM42Q9BTD8 480 aaKnown RBP17.63■□□□□ 0.41
AC027288.3-202ENST00000550268 RAB11FIP3O75154 756 aa17.62■□□□□ 0.41
AC027288.3-202ENST00000550268 BAG4O95429 457 aaKnown RBP17.62■□□□□ 0.41
AC027288.3-202ENST00000550268 MCCP23508 829 aa17.62■□□□□ 0.41
AC027288.3-202ENST00000550268 NLRP6P59044 892 aa17.62■□□□□ 0.41
AC027288.3-202ENST00000550268 KDM3BQ7LBC6 1761 aa17.61■□□□□ 0.41
AC027288.3-202ENST00000550268 FOXO3O43524 673 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms