RNA–Protein interactions for RNA: ENST00000549128.5

CHPT1-204, Transcript of choline phosphotransferase 1, humanhuman

TSL 5

Gene CHPT1, Length 1,552 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPT1-204ENST00000549128 TNS1Q9HBL0 1735 aaKnown RBP34.58■■■■□ 3.13
CHPT1-204ENST00000549128 CCDC27Q2M243 656 aa34.57■■■■□ 3.13
CHPT1-204ENST00000549128 ASAP1Q9ULH1 1129 aa34.57■■■■□ 3.12
CHPT1-204ENST00000549128 APBA3O96018 575 aa34.56■■■■□ 3.12
CHPT1-204ENST00000549128 NCBP3Q53F19 620 aaKnown RBP34.56■■■■□ 3.12
CHPT1-204ENST00000549128 SIPA1L3O60292 1781 aaPredicted RBP34.55■■■■□ 3.12
CHPT1-204ENST00000549128 MIS18AQ9NYP9 233 aa34.55■■■■□ 3.12
CHPT1-204ENST00000549128 ATG3Q9NT62 314 aa34.54■■■■□ 3.12
CHPT1-204ENST00000549128 SLC39A6Q13433 755 aa34.53■■■■□ 3.12
CHPT1-204ENST00000549128 TAF7Q15545 349 aaPredicted RBP34.53■■■■□ 3.12
CHPT1-204ENST00000549128 BTBD11A6QL63 1104 aa34.5■■■■□ 3.11
CHPT1-204ENST00000549128 DEFB132Q7Z7B7 95 aa34.5■■■■□ 3.11
CHPT1-204ENST00000549128 CCDC125Q86Z20 511 aa34.5■■■■□ 3.11
CHPT1-204ENST00000549128 KCNQ3O43525 872 aa34.49■■■■□ 3.11
CHPT1-204ENST00000549128 HNRNPUQ00839 825 aaKnown RBP eCLIP34.49■■■■□ 3.11
CHPT1-204ENST00000549128 SF3B2Q13435 895 aaKnown RBP34.49■■■■□ 3.11
CHPT1-204ENST00000549128 NGEFQ8N5V2 710 aa34.49■■■■□ 3.11
CHPT1-204ENST00000549128 ZNF521Q96K83 1311 aa34.47■■■■□ 3.11
CHPT1-204ENST00000549128 EN1Q05925 392 aaPredicted RBP34.47■■■■□ 3.11
CHPT1-204ENST00000549128 LAS1LQ9Y4W2 734 aaKnown RBP34.47■■■■□ 3.11
CHPT1-204ENST00000549128 PALLDQ8WX93 1383 aa34.46■■■■□ 3.11
CHPT1-204ENST00000549128 PLSCR1O15162 318 aa34.45■■■■□ 3.11
CHPT1-204ENST00000549128 ZNF790Q6PG37 636 aa34.45■■■■□ 3.1
CHPT1-204ENST00000549128 PAPPAQ13219 1627 aa34.44■■■■□ 3.1
CHPT1-204ENST00000549128 CHL1O00533 1208 aa34.43■■■■□ 3.1
CHPT1-204ENST00000549128 BAG6P46379 1132 aa34.43■■■■□ 3.1
CHPT1-204ENST00000549128 PROM2Q8N271 834 aa34.43■■■■□ 3.1
CHPT1-204ENST00000549128 SMARCC1Q92922 1105 aaPredicted RBP34.43■■■■□ 3.1
CHPT1-204ENST00000549128 PTCD1O75127 700 aaKnown RBP34.42■■■■□ 3.1
CHPT1-204ENST00000549128 ZNF853P0CG23 659 aa34.42■■■■□ 3.1
CHPT1-204ENST00000549128 WDR63Q8IWG1 891 aa34.42■■■■□ 3.1
CHPT1-204ENST00000549128 CFAP44Q96MT7 982 aa34.42■■■■□ 3.1
CHPT1-204ENST00000549128 CAMKK2Q96RR4 588 aa34.42■■■■□ 3.1
CHPT1-204ENST00000549128 SPINK5Q9NQ38 1064 aaPredicted RBP34.42■■■■□ 3.1
CHPT1-204ENST00000549128 KCNQ4P56696 695 aa34.41■■■■□ 3.1
CHPT1-204ENST00000549128 EZH2Q15910 746 aaKnown RBP34.41■■■■□ 3.1
CHPT1-204ENST00000549128 TSPYL4Q9UJ04 414 aa34.41■■■■□ 3.1
CHPT1-204ENST00000549128 CALD1Q05682 793 aaKnown RBP34.4■■■■□ 3.1
CHPT1-204ENST00000549128 SLC4A9Q96Q91 983 aa34.4■■■■□ 3.1
CHPT1-204ENST00000549128 RBM42Q9BTD8 480 aaKnown RBP34.4■■■■□ 3.1
CHPT1-204ENST00000549128 TTC5Q8N0Z6 440 aa34.39■■■■□ 3.1
CHPT1-204ENST00000549128 IFT57Q9NWB7 429 aa34.39■■■■□ 3.1
CHPT1-204ENST00000549128 KCPQ6ZWJ8 1503 aa34.38■■■■□ 3.09
CHPT1-204ENST00000549128 TXNRD1Q16881 649 aa34.38■■■■□ 3.09
CHPT1-204ENST00000549128 ZNF496Q96IT1 587 aaPredicted RBP34.38■■■■□ 3.09
CHPT1-204ENST00000549128 KDM3BQ7LBC6 1761 aa34.38■■■■□ 3.09
CHPT1-204ENST00000549128 LY75O60449 1722 aa34.37■■■■□ 3.09
CHPT1-204ENST00000549128 LOC102724428A0A0B4J2F2 783 aa34.37■■■■□ 3.09
CHPT1-204ENST00000549128 SIK1P57059 783 aa34.37■■■■□ 3.09
CHPT1-204ENST00000549128 GNAI1P63096 354 aa34.37■■■■□ 3.09
CHPT1-204ENST00000549128 MBIPQ9NS73 344 aa34.37■■■■□ 3.09
CHPT1-204ENST00000549128 LRRC4BQ9NT99 713 aa34.36■■■■□ 3.09
CHPT1-204ENST00000549128 BABAM1Q9NWV8 329 aa34.36■■■■□ 3.09
CHPT1-204ENST00000549128 IL16Q14005 1332 aa34.36■■■■□ 3.09
CHPT1-204ENST00000549128 UBR2Q8IWV8 1755 aa34.35■■■■□ 3.09
CHPT1-204ENST00000549128 TSR2Q969E8 191 aaKnown RBP34.34■■■■□ 3.09
CHPT1-204ENST00000549128 CCNL1Q9UK58 526 aaPredicted RBP34.34■■■■□ 3.09
CHPT1-204ENST00000549128 SOCS7O14512 581 aa34.33■■■■□ 3.09
CHPT1-204ENST00000549128 EIF4A1P60842 406 aaKnown RBP34.33■■■■□ 3.09
CHPT1-204ENST00000549128 CDCA7LQ96GN5 454 aa34.33■■■■□ 3.09
CHPT1-204ENST00000549128 ATP6V1AP38606 617 aa34.32■■■■□ 3.08
CHPT1-204ENST00000549128 FMNL2Q96PY5 1086 aa34.32■■■■□ 3.08
CHPT1-204ENST00000549128 RGPD3A6NKT7 1758 aaPredicted RBP34.31■■■■□ 3.08
CHPT1-204ENST00000549128 RGPD4Q7Z3J3 1758 aa34.31■■■■□ 3.08
CHPT1-204ENST00000549128 GOLGA2Q08379 1002 aa34.31■■■■□ 3.08
CHPT1-204ENST00000549128 ITPK1Q13572 414 aa34.31■■■■□ 3.08
CHPT1-204ENST00000549128 KRT24Q2M2I5 525 aa34.31■■■■□ 3.08
CHPT1-204ENST00000549128 YTHDC1Q96MU7 727 aaKnown RBP34.31■■■■□ 3.08
CHPT1-204ENST00000549128 PRAMEF22A3QJZ6 481 aa34.29■■■■□ 3.08
CHPT1-204ENST00000549128 HEG1Q9ULI3 1381 aa34.29■■■■□ 3.08
CHPT1-204ENST00000549128 SLC27A3Q5K4L6 730 aa34.28■■■■□ 3.08
CHPT1-204ENST00000549128 ZBED9Q6R2W3 1325 aa34.28■■■■□ 3.08
CHPT1-204ENST00000549128 DNAJC10Q8IXB1 793 aa34.27■■■■□ 3.08
CHPT1-204ENST00000549128 FANCIQ9NVI1 1328 aa34.27■■■■□ 3.08
CHPT1-204ENST00000549128 SLFN5Q08AF3 891 aa34.25■■■■□ 3.07
CHPT1-204ENST00000549128 VSIG10Q8N0Z9 540 aa34.25■■■■□ 3.07
CHPT1-204ENST00000549128 LINC00116Q8NCU8 138 aa34.24■■■■□ 3.07
CHPT1-204ENST00000549128 RREB1Q92766 1687 aa34.24■■■■□ 3.07
CHPT1-204ENST00000549128 TJP1Q07157 1748 aa34.24■■■■□ 3.07
CHPT1-204ENST00000549128 GIGYF1O75420 1035 aaPredicted RBP34.23■■■■□ 3.07
CHPT1-204ENST00000549128 E9PSI1 815 aa34.22■■■■□ 3.07
CHPT1-204ENST00000549128 SNRPA1P09661 255 aaKnown RBP34.22■■■■□ 3.07
CHPT1-204ENST00000549128 USP16Q9Y5T5 823 aa34.22■■■■□ 3.07
CHPT1-204ENST00000549128 ZNF831Q5JPB2 1677 aa34.21■■■■□ 3.07
CHPT1-204ENST00000549128 C8orf58Q8NAV2 365 aa34.21■■■■□ 3.07
CHPT1-204ENST00000549128 MYH16Q9H6N6 1097 aa34.21■■■■□ 3.07
CHPT1-204ENST00000549128 ELL2O00472 640 aaPredicted RBP34.19■■■■□ 3.06
CHPT1-204ENST00000549128 TAF1LQ8IZX4 1826 aa34.19■■■■□ 3.06
CHPT1-204ENST00000549128 NUP188Q5SRE5 1749 aa34.19■■■■□ 3.06
CHPT1-204ENST00000549128 TRMT2AQ8IZ69 625 aaKnown RBP34.19■■■■□ 3.06
CHPT1-204ENST00000549128 TSPYL6Q8N831 410 aa34.19■■■■□ 3.06
CHPT1-204ENST00000549128 C5P01031 1676 aa34.18■■■■□ 3.06
CHPT1-204ENST00000549128 CICQ96RK0 1608 aaPredicted RBP34.17■■■■□ 3.06
CHPT1-204ENST00000549128 CYP19A1P11511 503 aaPredicted RBP34.17■■■■□ 3.06
CHPT1-204ENST00000549128 EXOSC9Q06265 439 aaKnown RBP34.17■■■■□ 3.06
CHPT1-204ENST00000549128 DUSP27Q5VZP5 1158 aa34.16■■■■□ 3.06
CHPT1-204ENST00000549128 ANO8Q9HCE9 1232 aaPredicted RBP34.16■■■■□ 3.06
CHPT1-204ENST00000549128 COL5A3P25940 1745 aaPredicted RBP34.15■■■■□ 3.06
CHPT1-204ENST00000549128 ZNF827Q17R98 1081 aa34.15■■■■□ 3.06
CHPT1-204ENST00000549128 TEX13AQ9BXU3 409 aaPredicted RBP34.14■■■■□ 3.06
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms