RNA–Protein interactions for RNA: ENST00000545209.1

SPPL3-209, Transcript of signal peptide peptidase like 3, humanhuman

TSL 1 (best)

Gene SPPL3, Length 797 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPPL3-209ENST00000545209 NME9Q86XW9 330 aa9.2□□□□□ -0.94
SPPL3-209ENST00000545209 KIAA1468Q9P260 1216 aa9.2□□□□□ -0.94
SPPL3-209ENST00000545209 ACEP12821 1306 aa9.2□□□□□ -0.94
SPPL3-209ENST00000545209 AATKQ6ZMQ8 1374 aa9.2□□□□□ -0.94
SPPL3-209ENST00000545209 PNPLA6Q8IY17 1366 aa9.2□□□□□ -0.94
SPPL3-209ENST00000545209 USP6P35125 1406 aa9.2□□□□□ -0.94
SPPL3-209ENST00000545209 COL3A1P02461 1466 aaPredicted RBP9.2□□□□□ -0.94
SPPL3-209ENST00000545209 NUTM2FA1L443 756 aa9.19□□□□□ -0.94
SPPL3-209ENST00000545209 NEFMP07197 916 aa9.19□□□□□ -0.94
SPPL3-209ENST00000545209 RRP1P56182 461 aaKnown RBP9.19□□□□□ -0.94
SPPL3-209ENST00000545209 RNF166Q96A37 237 aaPredicted RBP9.19□□□□□ -0.94
SPPL3-209ENST00000545209 NBPF3Q9H094 633 aa9.19□□□□□ -0.94
SPPL3-209ENST00000545209 TTC21BQ7Z4L5 1316 aa9.19□□□□□ -0.94
SPPL3-209ENST00000545209 TTC21AQ8NDW8 1320 aa9.19□□□□□ -0.94
SPPL3-209ENST00000545209 MAPK8IP3Q9UPT6 1336 aa9.19□□□□□ -0.94
SPPL3-209ENST00000545209 IQSEC2Q5JU85 1478 aa9.19□□□□□ -0.94
SPPL3-209ENST00000545209 CDK12Q9NYV4 1490 aaPredicted RBP9.19□□□□□ -0.94
SPPL3-209ENST00000545209 PPM1GO15355 546 aaPredicted RBP9.18□□□□□ -0.94
SPPL3-209ENST00000545209 NKTRP30414 1462 aaKnown RBP9.18□□□□□ -0.94
SPPL3-209ENST00000545209 SLFN5Q08AF3 891 aa9.18□□□□□ -0.94
SPPL3-209ENST00000545209 RBM26Q5T8P6 1007 aaKnown RBP9.18□□□□□ -0.94
SPPL3-209ENST00000545209 DUSP27Q5VZP5 1158 aa9.18□□□□□ -0.94
SPPL3-209ENST00000545209 TCP11L2Q8N4U5 519 aa9.18□□□□□ -0.94
SPPL3-209ENST00000545209 NGDNQ8NEJ9 315 aaKnown RBP9.18□□□□□ -0.94
SPPL3-209ENST00000545209 POLKQ9UBT6 870 aa9.18□□□□□ -0.94
SPPL3-209ENST00000545209 CHD2O14647 1828 aaKnown RBP9.17□□□□□ -0.94
SPPL3-209ENST00000545209 NRKQ7Z2Y5 1582 aa9.17□□□□□ -0.94
SPPL3-209ENST00000545209 CCDC27Q2M243 656 aa9.17□□□□□ -0.94
SPPL3-209ENST00000545209 PACS2Q86VP3 889 aa9.17□□□□□ -0.94
SPPL3-209ENST00000545209 MRPL50Q8N5N7 158 aaKnown RBP9.17□□□□□ -0.94
SPPL3-209ENST00000545209 TSKSQ9UJT2 592 aa9.17□□□□□ -0.94
SPPL3-209ENST00000545209 FMN2Q9NZ56 1722 aa9.17□□□□□ -0.94
SPPL3-209ENST00000545209 ADGRL3Q9HAR2 1447 aa9.16□□□□□ -0.94
SPPL3-209ENST00000545209 TULP1O00294 542 aaPredicted RBP9.16□□□□□ -0.94
SPPL3-209ENST00000545209 PTGDRQ13258 359 aa9.16□□□□□ -0.94
SPPL3-209ENST00000545209 C14orf37Q86TY3 774 aa9.16□□□□□ -0.94
SPPL3-209ENST00000545209 WDR63Q8IWG1 891 aa9.16□□□□□ -0.94
SPPL3-209ENST00000545209 WWC1Q8IX03 1113 aa9.16□□□□□ -0.94
SPPL3-209ENST00000545209 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.16□□□□□ -0.94
SPPL3-209ENST00000545209 RBM27Q9P2N5 1060 aaKnown RBP9.16□□□□□ -0.94
SPPL3-209ENST00000545209 OVOS2A0A0J9YW53 1432 aa9.15□□□□□ -0.94
SPPL3-209ENST00000545209 OVOS2Q6IE36 1432 aa9.15□□□□□ -0.94
SPPL3-209ENST00000545209 FCHSD2O94868 740 aa9.15□□□□□ -0.94
SPPL3-209ENST00000545209 NEUROD2Q15784 382 aa9.15□□□□□ -0.94
SPPL3-209ENST00000545209 TRMT2AQ8IZ69 625 aaKnown RBP9.15□□□□□ -0.94
SPPL3-209ENST00000545209 PMFBP1Q8TBY8 1022 aa9.15□□□□□ -0.94
SPPL3-209ENST00000545209 MYH16Q9H6N6 1097 aa9.15□□□□□ -0.94
SPPL3-209ENST00000545209 FAM198AQ9UFP1 575 aa9.15□□□□□ -0.94
SPPL3-209ENST00000545209 RRP7AQ9Y3A4 280 aaKnown RBP9.15□□□□□ -0.94
SPPL3-209ENST00000545209 NWD1Q149M9 1564 aa9.15□□□□□ -0.95
SPPL3-209ENST00000545209 SSH2Q76I76 1423 aa9.14□□□□□ -0.95
SPPL3-209ENST00000545209 LAPTM4BQ86VI4 370 aa9.14□□□□□ -0.95
SPPL3-209ENST00000545209 EMILIN1Q9Y6C2 1016 aa9.14□□□□□ -0.95
SPPL3-209ENST00000545209 NALCNQ8IZF0 1738 aa9.14□□□□□ -0.95
SPPL3-209ENST00000545209 USP31Q70CQ4 1352 aa9.13□□□□□ -0.95
SPPL3-209ENST00000545209 MAP2P11137 1827 aaKnown RBP9.13□□□□□ -0.95
SPPL3-209ENST00000545209 GOLGA8CPA6NN73 597 aa9.13□□□□□ -0.95
SPPL3-209ENST00000545209 TMPOP42166 694 aaKnown RBP9.13□□□□□ -0.95
SPPL3-209ENST00000545209 TTC13Q8NBP0 860 aa9.13□□□□□ -0.95
SPPL3-209ENST00000545209 CCDC136Q96JN2 1154 aa9.13□□□□□ -0.95
SPPL3-209ENST00000545209 PLEKHF1Q96S99 279 aa9.13□□□□□ -0.95
SPPL3-209ENST00000545209 LRRC7Q96NW7 1537 aa9.12□□□□□ -0.95
SPPL3-209ENST00000545209 IL13P35225 146 aa9.12□□□□□ -0.95
SPPL3-209ENST00000545209 RRS1Q15050 365 aaKnown RBP9.12□□□□□ -0.95
SPPL3-209ENST00000545209 PADI6Q6TGC4 694 aa9.12□□□□□ -0.95
SPPL3-209ENST00000545209 KCTD12Q96CX2 325 aaKnown RBP9.12□□□□□ -0.95
SPPL3-209ENST00000545209 SEPT9Q9UHD8 586 aaPredicted RBP9.12□□□□□ -0.95
SPPL3-209ENST00000545209 IL16Q14005 1332 aa9.11□□□□□ -0.95
SPPL3-209ENST00000545209 FBLN1P23142 703 aa9.11□□□□□ -0.95
SPPL3-209ENST00000545209 PRKAR2BP31323 418 aa9.11□□□□□ -0.95
SPPL3-209ENST00000545209 CALD1Q05682 793 aaKnown RBP9.11□□□□□ -0.95
SPPL3-209ENST00000545209 PROSER2Q86WR7 435 aaPredicted RBP9.11□□□□□ -0.95
SPPL3-209ENST00000545209 RSPH6AQ9H0K4 717 aa9.11□□□□□ -0.95
SPPL3-209ENST00000545209 RGPD8O14715 1765 aaPredicted RBP9.1□□□□□ -0.95
SPPL3-209ENST00000545209 NBPF26B4DH59 902 aa9.1□□□□□ -0.95
SPPL3-209ENST00000545209 CT47B1P0C2W7 299 aaPredicted RBP9.1□□□□□ -0.95
SPPL3-209ENST00000545209 RIPK4P57078 832 aa9.1□□□□□ -0.95
SPPL3-209ENST00000545209 LMOD3Q0VAK6 560 aa9.1□□□□□ -0.95
SPPL3-209ENST00000545209 FAM98CQ17RN3 349 aaKnown RBP9.1□□□□□ -0.95
SPPL3-209ENST00000545209 B4GALNT3Q6L9W6 998 aa9.1□□□□□ -0.95
SPPL3-209ENST00000545209 TATDN2Q93075 761 aa9.1□□□□□ -0.95
SPPL3-209ENST00000545209 PNMA3Q9UL41 463 aa9.1□□□□□ -0.95
SPPL3-209ENST00000545209 SBNO1A3KN83 1393 aa9.1□□□□□ -0.95
SPPL3-209ENST00000545209 KIF24Q5T7B8 1368 aa9.1□□□□□ -0.95
SPPL3-209ENST00000545209 C3orf80F5H4A9 247 aa9.09□□□□□ -0.95
SPPL3-209ENST00000545209 HMOX1P09601 288 aa9.09□□□□□ -0.95
SPPL3-209ENST00000545209 HIC1Q14526 733 aa9.09□□□□□ -0.95
SPPL3-209ENST00000545209 NFE2L2Q16236 605 aa9.09□□□□□ -0.95
SPPL3-209ENST00000545209 ESCO1Q5FWF5 840 aa9.09□□□□□ -0.95
SPPL3-209ENST00000545209 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.09□□□□□ -0.95
SPPL3-209ENST00000545209 ABTB2Q8N961 1025 aa9.09□□□□□ -0.95
SPPL3-209ENST00000545209 WNT2BQ93097 391 aa9.09□□□□□ -0.95
SPPL3-209ENST00000545209 ZFRQ96KR1 1074 aaKnown RBP9.09□□□□□ -0.95
SPPL3-209ENST00000545209 PIK3C2AO00443 1686 aa9.09□□□□□ -0.95
SPPL3-209ENST00000545209 FLT4P35916 1363 aa9.09□□□□□ -0.95
SPPL3-209ENST00000545209 NCOA3Q9Y6Q9 1424 aa9.08□□□□□ -0.96
SPPL3-209ENST00000545209 USP54Q70EL1 1684 aa9.08□□□□□ -0.96
SPPL3-209ENST00000545209 SMAPO00193 183 aa9.08□□□□□ -0.96
SPPL3-209ENST00000545209 PLIN1O60240 522 aa9.08□□□□□ -0.96
SPPL3-209ENST00000545209 CANXP27824 592 aaKnown RBP9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms