RNA–Protein interactions for RNA: ENST00000544327.1

SCARB1-208, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5 BASIC

Gene SCARB1, Length 1,812 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-208ENST00000544327 SMARCA5O60264 1052 aaPredicted RBP21.91■■□□□ 1.1
SCARB1-208ENST00000544327 SDSP20132 328 aa21.91■■□□□ 1.1
SCARB1-208ENST00000544327 NBPF6Q5VWK0 638 aa21.91■■□□□ 1.1
SCARB1-208ENST00000544327 NBPF4Q96M43 638 aa21.91■■□□□ 1.1
SCARB1-208ENST00000544327 OVOS2A0A0G2JMS6 1433 aa21.9■■□□□ 1.1
SCARB1-208ENST00000544327 HSP90AB1P08238 724 aaKnown RBP21.9■■□□□ 1.1
SCARB1-208ENST00000544327 ATP8B2P98198 1209 aa21.9■■□□□ 1.1
SCARB1-208ENST00000544327 ESCO1Q5FWF5 840 aa21.9■■□□□ 1.1
SCARB1-208ENST00000544327 CHMP4AQ9BY43 222 aa21.9■■□□□ 1.1
SCARB1-208ENST00000544327 RGPD2P0DJD1 1756 aa21.9■■□□□ 1.1
SCARB1-208ENST00000544327 TRPM3Q9HCF6 1732 aaPredicted RBP21.9■■□□□ 1.1
SCARB1-208ENST00000544327 K7ELQ4 463 aaPredicted RBP21.9■■□□□ 1.1
SCARB1-208ENST00000544327 RABEP1Q15276 862 aa21.9■■□□□ 1.1
SCARB1-208ENST00000544327 CASC1Q6TDU7 716 aa21.9■■□□□ 1.1
SCARB1-208ENST00000544327 USHBP1Q8N6Y0 703 aa21.9■■□□□ 1.1
SCARB1-208ENST00000544327 USP26Q9BXU7 913 aa21.9■■□□□ 1.1
SCARB1-208ENST00000544327 LMTK3Q96Q04 1460 aa21.89■■□□□ 1.1
SCARB1-208ENST00000544327 SALL3Q9BXA9 1300 aa21.89■■□□□ 1.09
SCARB1-208ENST00000544327 MST1RQ04912 1400 aa21.88■■□□□ 1.09
SCARB1-208ENST00000544327 KIF1AQ12756 1690 aa21.88■■□□□ 1.09
SCARB1-208ENST00000544327 CD2BP2O95400 341 aaKnown RBP21.87■■□□□ 1.09
SCARB1-208ENST00000544327 PDE1AP54750 535 aa21.87■■□□□ 1.09
SCARB1-208ENST00000544327 HDGFL1Q5TGJ6 251 aa21.87■■□□□ 1.09
SCARB1-208ENST00000544327 IBTKQ9P2D0 1353 aaPredicted RBP21.86■■□□□ 1.09
SCARB1-208ENST00000544327 EIF4A1P60842 406 aaKnown RBP21.86■■□□□ 1.09
SCARB1-208ENST00000544327 AKAP4Q5JQC9 854 aa21.86■■□□□ 1.09
SCARB1-208ENST00000544327 ARHGEF25Q86VW2 580 aa21.86■■□□□ 1.09
SCARB1-208ENST00000544327 DDX11L8A8MPP1 907 aa21.85■■□□□ 1.09
SCARB1-208ENST00000544327 RAB3GAP1Q15042 981 aa21.85■■□□□ 1.09
SCARB1-208ENST00000544327 AMOTQ4VCS5 1084 aa21.85■■□□□ 1.09
SCARB1-208ENST00000544327 PLEKHO1Q53GL0 409 aaPredicted RBP21.85■■□□□ 1.09
SCARB1-208ENST00000544327 RBM33Q96EV2 1170 aaKnown RBP21.85■■□□□ 1.09
SCARB1-208ENST00000544327 APBB1O00213 710 aa21.84■■□□□ 1.09
SCARB1-208ENST00000544327 REC8O95072 547 aa21.84■■□□□ 1.09
SCARB1-208ENST00000544327 LRRCC1Q9C099 1032 aa21.84■■□□□ 1.09
SCARB1-208ENST00000544327 USP44Q9H0E7 712 aa21.84■■□□□ 1.09
SCARB1-208ENST00000544327 NECTIN2Q92692 538 aa21.83■■□□□ 1.09
SCARB1-208ENST00000544327 RBM42Q9BTD8 480 aaKnown RBP21.83■■□□□ 1.09
SCARB1-208ENST00000544327 PNMA6EA0A0J9YXQ4 647 aa21.83■■□□□ 1.08
SCARB1-208ENST00000544327 GCP02774 474 aa21.83■■□□□ 1.08
SCARB1-208ENST00000544327 LGR6Q9HBX8 967 aa21.83■■□□□ 1.08
SCARB1-208ENST00000544327 ADAMTS7Q9UKP4 1686 aa21.82■■□□□ 1.08
SCARB1-208ENST00000544327 STAP2Q9UGK3 403 aa21.82■■□□□ 1.08
SCARB1-208ENST00000544327 EXOC6BQ9Y2D4 811 aa21.82■■□□□ 1.08
SCARB1-208ENST00000544327 LRRFIP2Q9Y608 721 aaKnown RBP21.82■■□□□ 1.08
SCARB1-208ENST00000544327 AOX1Q06278 1338 aa21.82■■□□□ 1.08
SCARB1-208ENST00000544327 ERC2O15083 957 aa21.81■■□□□ 1.08
SCARB1-208ENST00000544327 L1TD1Q5T7N2 865 aaKnown RBP21.8■■□□□ 1.08
SCARB1-208ENST00000544327 ZNF530Q6P9A1 599 aaPredicted RBP21.8■■□□□ 1.08
SCARB1-208ENST00000544327 SSH3Q8TE77 659 aa21.8■■□□□ 1.08
SCARB1-208ENST00000544327 ORAI2Q96SN7 254 aa21.8■■□□□ 1.08
SCARB1-208ENST00000544327 SRCIN1Q9C0H9 1055 aa21.8■■□□□ 1.08
SCARB1-208ENST00000544327 SIPA1L3O60292 1781 aaPredicted RBP21.8■■□□□ 1.08
SCARB1-208ENST00000544327 UBTFL1P0CB47 393 aaPredicted RBP21.8■■□□□ 1.08
SCARB1-208ENST00000544327 TNPO1Q92973 898 aaKnown RBP21.8■■□□□ 1.08
SCARB1-208ENST00000544327 PHAXQ9H814 394 aaKnown RBP21.79■■□□□ 1.08
SCARB1-208ENST00000544327 PXDNQ92626 1479 aa21.79■■□□□ 1.08
SCARB1-208ENST00000544327 TRAK2O60296 914 aa21.78■■□□□ 1.08
SCARB1-208ENST00000544327 MX1P20591 662 aa21.78■■□□□ 1.08
SCARB1-208ENST00000544327 PTMSP20962 102 aa21.78■■□□□ 1.08
SCARB1-208ENST00000544327 POLA2Q14181 598 aa21.78■■□□□ 1.08
SCARB1-208ENST00000544327 LRRC59Q96AG4 307 aaKnown RBP21.78■■□□□ 1.08
SCARB1-208ENST00000544327 GBP4Q96PP9 640 aa21.78■■□□□ 1.08
SCARB1-208ENST00000544327 BRPF3Q9ULD4 1205 aa21.78■■□□□ 1.08
SCARB1-208ENST00000544327 C1orf167Q5SNV9 1468 aa21.78■■□□□ 1.08
SCARB1-208ENST00000544327 ALS2Q96Q42 1657 aa21.78■■□□□ 1.08
SCARB1-208ENST00000544327 RNMTO43148 476 aaKnown RBP21.78■■□□□ 1.08
SCARB1-208ENST00000544327 RAB11FIP3O75154 756 aa21.78■■□□□ 1.08
SCARB1-208ENST00000544327 TEFQ10587 303 aa21.78■■□□□ 1.08
SCARB1-208ENST00000544327 CLEC17AQ6ZS10 378 aa21.78■■□□□ 1.08
SCARB1-208ENST00000544327 IL27Q8NEV9 243 aa21.78■■□□□ 1.08
SCARB1-208ENST00000544327 HEG1Q9ULI3 1381 aa21.77■■□□□ 1.08
SCARB1-208ENST00000544327 HSP90AA1P07900 732 aaKnown RBP21.77■■□□□ 1.08
SCARB1-208ENST00000544327 BTBD11A6QL63 1104 aa21.76■■□□□ 1.07
SCARB1-208ENST00000544327 ANKRD24Q8TF21 1146 aa21.76■■□□□ 1.07
SCARB1-208ENST00000544327 FSD2A1L4K1 749 aa21.76■■□□□ 1.07
SCARB1-208ENST00000544327 BEND3Q5T5X7 828 aa21.76■■□□□ 1.07
SCARB1-208ENST00000544327 DNAAF4Q8WXU2 420 aa21.75■■□□□ 1.07
SCARB1-208ENST00000544327 CHPF2Q9P2E5 772 aa21.75■■□□□ 1.07
SCARB1-208ENST00000544327 KCNQ3O43525 872 aa21.74■■□□□ 1.07
SCARB1-208ENST00000544327 C1orf141Q5JVX7 400 aa21.74■■□□□ 1.07
SCARB1-208ENST00000544327 ABCC6O95255 1503 aa21.74■■□□□ 1.07
SCARB1-208ENST00000544327 ZBTB7CA1YPR0 619 aa21.73■■□□□ 1.07
SCARB1-208ENST00000544327 EIF2S2P20042 333 aaKnown RBP21.73■■□□□ 1.07
SCARB1-208ENST00000544327 KRT28Q7Z3Y7 464 aa21.73■■□□□ 1.07
SCARB1-208ENST00000544327 ADCY9O60503 1353 aa21.73■■□□□ 1.07
SCARB1-208ENST00000544327 ST18O60284 1047 aa21.73■■□□□ 1.07
SCARB1-208ENST00000544327 IL17RAQ96F46 866 aa21.73■■□□□ 1.07
SCARB1-208ENST00000544327 ESYT1Q9BSJ8 1104 aa21.73■■□□□ 1.07
SCARB1-208ENST00000544327 EPB41L2O43491 1005 aaKnown RBP21.72■■□□□ 1.07
SCARB1-208ENST00000544327 MPRIPQ6WCQ1 1025 aa21.72■■□□□ 1.07
SCARB1-208ENST00000544327 PPP1R42Q7Z4L9 355 aa21.71■■□□□ 1.07
SCARB1-208ENST00000544327 PROSER2Q86WR7 435 aaPredicted RBP21.71■■□□□ 1.07
SCARB1-208ENST00000544327 C19orf44Q9H6X5 657 aa21.71■■□□□ 1.07
SCARB1-208ENST00000544327 DBF4Q9UBU7 674 aaPredicted RBP21.71■■□□□ 1.07
SCARB1-208ENST00000544327 SKOR2Q2VWA4 1001 aaPredicted RBP21.71■■□□□ 1.07
SCARB1-208ENST00000544327 CWC22Q9HCG8 908 aaKnown RBP21.71■■□□□ 1.07
SCARB1-208ENST00000544327 RGPD5Q99666 1765 aa21.7■■□□□ 1.07
SCARB1-208ENST00000544327 PLEKHG2Q9H7P9 1386 aa21.7■■□□□ 1.06
SCARB1-208ENST00000544327 PI4KAP2A4QPH2 592 aa21.7■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 75.4 ms