RNA–Protein interactions for RNA: ENST00000544057.1

PHOX2A-202, Transcript of paired like homeobox 2A, humanhuman

TSL 3

Gene PHOX2A, Length 605 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHOX2A-202ENST00000544057 MAPK8IP3Q9UPT6 1336 aa38.97■■■■□ 3.83
PHOX2A-202ENST00000544057 RTF1Q92541 710 aaKnown RBP38.96■■■■□ 3.83
PHOX2A-202ENST00000544057 HTATSF1O43719 755 aaKnown RBP38.95■■■■□ 3.83
PHOX2A-202ENST00000544057 PAPPAQ13219 1627 aa38.94■■■■□ 3.82
PHOX2A-202ENST00000544057 LOC102724428A0A0B4J2F2 783 aa38.94■■■■□ 3.82
PHOX2A-202ENST00000544057 SIK1P57059 783 aa38.94■■■■□ 3.82
PHOX2A-202ENST00000544057 MRC1P22897 1456 aa38.93■■■■□ 3.82
PHOX2A-202ENST00000544057 TEFQ10587 303 aa38.92■■■■□ 3.82
PHOX2A-202ENST00000544057 IL17REQ8NFR9 667 aa38.92■■■■□ 3.82
PHOX2A-202ENST00000544057 KCNQ4P56696 695 aa38.91■■■■□ 3.82
PHOX2A-202ENST00000544057 AKT1S1Q96B36 256 aa38.89■■■■□ 3.82
PHOX2A-202ENST00000544057 CEMIPQ8WUJ3 1361 aa38.88■■■■□ 3.81
PHOX2A-202ENST00000544057 NFE2L2Q16236 605 aa38.88■■■■□ 3.81
PHOX2A-202ENST00000544057 ATP6V1AP38606 617 aa38.87■■■■□ 3.81
PHOX2A-202ENST00000544057 RBM42Q9BTD8 480 aaKnown RBP38.87■■■■□ 3.81
PHOX2A-202ENST00000544057 TAF1LQ8IZX4 1826 aa38.85■■■■□ 3.81
PHOX2A-202ENST00000544057 ADAMTS8Q9UP79 889 aa38.85■■■■□ 3.81
PHOX2A-202ENST00000544057 C5P01031 1676 aa38.84■■■■□ 3.81
PHOX2A-202ENST00000544057 ZNF827Q17R98 1081 aa38.84■■■■□ 3.81
PHOX2A-202ENST00000544057 TFCP2L1Q9NZI6 479 aa38.84■■■■□ 3.81
PHOX2A-202ENST00000544057 ZNF831Q5JPB2 1677 aa38.83■■■■□ 3.81
PHOX2A-202ENST00000544057 RUNDC1Q96C34 613 aa38.82■■■■□ 3.8
PHOX2A-202ENST00000544057 PTCD1O75127 700 aaKnown RBP38.8■■■■□ 3.8
PHOX2A-202ENST00000544057 DLG5Q8TDM6 1919 aa38.8■■■■□ 3.8
PHOX2A-202ENST00000544057 MCM10Q7L590 875 aa38.79■■■■□ 3.8
PHOX2A-202ENST00000544057 TTC5Q8N0Z6 440 aa38.78■■■■□ 3.8
PHOX2A-202ENST00000544057 QSER1Q2KHR3 1735 aa38.77■■■■□ 3.8
PHOX2A-202ENST00000544057 AK7Q96M32 723 aa38.77■■■■□ 3.8
PHOX2A-202ENST00000544057 SIPA1L3O60292 1781 aaPredicted RBP38.76■■■■□ 3.8
PHOX2A-202ENST00000544057 SLC39A6Q13433 755 aa38.76■■■■□ 3.8
PHOX2A-202ENST00000544057 ITPK1Q13572 414 aa38.76■■■■□ 3.8
PHOX2A-202ENST00000544057 MRS2Q9HD23 443 aa38.76■■■■□ 3.8
PHOX2A-202ENST00000544057 C4BP0C0L5 1744 aa38.75■■■■□ 3.79
PHOX2A-202ENST00000544057 LMOD3Q0VAK6 560 aa38.75■■■■□ 3.79
PHOX2A-202ENST00000544057 CCDC146Q8IYE0 955 aa38.75■■■■□ 3.79
PHOX2A-202ENST00000544057 FLAD1Q8NFF5 587 aa38.75■■■■□ 3.79
PHOX2A-202ENST00000544057 SLC4A9Q96Q91 983 aa38.75■■■■□ 3.79
PHOX2A-202ENST00000544057 TMPOP42166 694 aaKnown RBP38.74■■■■□ 3.79
PHOX2A-202ENST00000544057 RIPK4P57078 832 aa38.74■■■■□ 3.79
PHOX2A-202ENST00000544057 LINC00116Q8NCU8 138 aa38.74■■■■□ 3.79
PHOX2A-202ENST00000544057 BTBD11A6QL63 1104 aa38.73■■■■□ 3.79
PHOX2A-202ENST00000544057 ZNF790Q6PG37 636 aa38.73■■■■□ 3.79
PHOX2A-202ENST00000544057 CASZ1Q86V15 1759 aa38.72■■■■□ 3.79
PHOX2A-202ENST00000544057 DCTN1Q14203 1278 aa38.72■■■■□ 3.79
PHOX2A-202ENST00000544057 CCDC184Q52MB2 194 aa38.72■■■■□ 3.79
PHOX2A-202ENST00000544057 VSIG10Q8N0Z9 540 aa38.72■■■■□ 3.79
PHOX2A-202ENST00000544057 SLC16A10Q8TF71 515 aa38.71■■■■□ 3.79
PHOX2A-202ENST00000544057 PNPLA7Q6ZV29 1317 aa38.7■■■■□ 3.79
PHOX2A-202ENST00000544057 TAF7Q15545 349 aaPredicted RBP38.7■■■■□ 3.79
PHOX2A-202ENST00000544057 RC3H1Q5TC82 1133 aaKnown RBP38.7■■■■□ 3.79
PHOX2A-202ENST00000544057 SPON1Q9HCB6 807 aa38.7■■■■□ 3.79
PHOX2A-202ENST00000544057 PNISRQ8TF01 805 aaKnown RBP38.68■■■■□ 3.78
PHOX2A-202ENST00000544057 LRP5O75197 1615 aa38.67■■■■□ 3.78
PHOX2A-202ENST00000544057 PDGFDQ9GZP0 370 aaPredicted RBP38.67■■■■□ 3.78
PHOX2A-202ENST00000544057 TUBGCP6Q96RT7 1819 aa38.67■■■■□ 3.78
PHOX2A-202ENST00000544057 CNTNAP4Q9C0A0 1308 aa38.66■■■■□ 3.78
PHOX2A-202ENST00000544057 MTFR1LQ9H019 292 aa38.66■■■■□ 3.78
PHOX2A-202ENST00000544057 KCPQ6ZWJ8 1503 aa38.66■■■■□ 3.78
PHOX2A-202ENST00000544057 UBR2Q8IWV8 1755 aa38.66■■■■□ 3.78
PHOX2A-202ENST00000544057 CICQ96RK0 1608 aaPredicted RBP38.66■■■■□ 3.78
PHOX2A-202ENST00000544057 FMNL2Q96PY5 1086 aa38.65■■■■□ 3.78
PHOX2A-202ENST00000544057 COL5A3P25940 1745 aaPredicted RBP38.64■■■■□ 3.78
PHOX2A-202ENST00000544057 SSFA2P28290 1259 aa38.64■■■■□ 3.78
PHOX2A-202ENST00000544057 TEX13AQ9BXU3 409 aaPredicted RBP38.64■■■■□ 3.78
PHOX2A-202ENST00000544057 GNPATO15228 680 aa38.63■■■■□ 3.77
PHOX2A-202ENST00000544057 UBR3Q6ZT12 1888 aa38.62■■■■□ 3.77
PHOX2A-202ENST00000544057 ZBTB7AO95365 584 aa38.62■■■■□ 3.77
PHOX2A-202ENST00000544057 MSH5O43196 834 aa38.61■■■■□ 3.77
PHOX2A-202ENST00000544057 NEUROD2Q15784 382 aa38.61■■■■□ 3.77
PHOX2A-202ENST00000544057 COL23A1Q86Y22 540 aaPredicted RBP38.61■■■■□ 3.77
PHOX2A-202ENST00000544057 ZNF496Q96IT1 587 aaPredicted RBP38.61■■■■□ 3.77
PHOX2A-202ENST00000544057 RRP7AQ9Y3A4 280 aaKnown RBP38.61■■■■□ 3.77
PHOX2A-202ENST00000544057 RTCBQ9Y3I0 505 aaKnown RBP38.61■■■■□ 3.77
PHOX2A-202ENST00000544057 DNAJC10Q8IXB1 793 aa38.6■■■■□ 3.77
PHOX2A-202ENST00000544057 HEG1Q9ULI3 1381 aa38.59■■■■□ 3.77
PHOX2A-202ENST00000544057 TJP1Q07157 1748 aa38.59■■■■□ 3.77
PHOX2A-202ENST00000544057 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP38.58■■■■□ 3.77
PHOX2A-202ENST00000544057 CRKLP46109 303 aaKnown RBP38.58■■■■□ 3.77
PHOX2A-202ENST00000544057 SRCAPQ6ZRS2 3230 aa38.57■■■■□ 3.76
PHOX2A-202ENST00000544057 RPS6KA4O75676 772 aa38.57■■■■□ 3.76
PHOX2A-202ENST00000544057 STARD3NLO95772 234 aa38.57■■■■□ 3.76
PHOX2A-202ENST00000544057 ADRA2BP18089 450 aa38.57■■■■□ 3.76
PHOX2A-202ENST00000544057 THUMPD2Q9BTF0 503 aaKnown RBP38.57■■■■□ 3.76
PHOX2A-202ENST00000544057 APAF1O14727 1248 aa38.56■■■■□ 3.76
PHOX2A-202ENST00000544057 BABAM1Q9NWV8 329 aa38.56■■■■□ 3.76
PHOX2A-202ENST00000544057 ATF5Q9Y2D1 282 aaPredicted RBP38.56■■■■□ 3.76
PHOX2A-202ENST00000544057 MYH14Q7Z406 1995 aaKnown RBP38.56■■■■□ 3.76
PHOX2A-202ENST00000544057 PHF14O94880 888 aa38.55■■■■□ 3.76
PHOX2A-202ENST00000544057 CYP19A1P11511 503 aaPredicted RBP38.55■■■■□ 3.76
PHOX2A-202ENST00000544057 TRAPPC3LQ5T215 181 aa38.55■■■■□ 3.76
PHOX2A-202ENST00000544057 KCNQ3O43525 872 aa38.54■■■■□ 3.76
PHOX2A-202ENST00000544057 CCDC87Q9NVE4 849 aa38.53■■■■□ 3.76
PHOX2A-202ENST00000544057 TRIM35Q9UPQ4 493 aa38.53■■■■□ 3.76
PHOX2A-202ENST00000544057 MIS18AQ9NYP9 233 aa38.51■■■■□ 3.76
PHOX2A-202ENST00000544057 SNRPA1P09661 255 aaKnown RBP38.5■■■■□ 3.75
PHOX2A-202ENST00000544057 INTS5Q6P9B9 1019 aaKnown RBP38.5■■■■□ 3.75
PHOX2A-202ENST00000544057 AMIGO3Q86WK7 504 aa38.5■■■■□ 3.75
PHOX2A-202ENST00000544057 PPP1R1BQ9UD71 204 aaPredicted RBP38.5■■■■□ 3.75
PHOX2A-202ENST00000544057 POLD1P28340 1107 aa38.48■■■■□ 3.75
PHOX2A-202ENST00000544057 PTGER2P43116 358 aa38.48■■■■□ 3.75
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms