RNA–Protein interactions for RNA: ENST00000543322.5

PTCD2-212, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 2 BASIC

Gene PTCD2, Length 2,029 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-212ENST00000543322 FOXO3O43524 673 aa15.83■□□□□ 0.12
PTCD2-212ENST00000543322 GNAI2P04899 355 aa15.83■□□□□ 0.12
PTCD2-212ENST00000543322 MIS18AQ9NYP9 233 aa15.83■□□□□ 0.12
PTCD2-212ENST00000543322 USP54Q70EL1 1684 aa15.83■□□□□ 0.12
PTCD2-212ENST00000543322 RTF1Q92541 710 aaKnown RBP15.82■□□□□ 0.12
PTCD2-212ENST00000543322 SLC4A10Q6U841 1118 aa15.82■□□□□ 0.12
PTCD2-212ENST00000543322 ANP32BQ92688 251 aaKnown RBP15.82■□□□□ 0.12
PTCD2-212ENST00000543322 IL17RAQ96F46 866 aa15.82■□□□□ 0.12
PTCD2-212ENST00000543322 MARF1Q9Y4F3 1742 aaKnown RBP15.81■□□□□ 0.12
PTCD2-212ENST00000543322 ZSCAN30Q86W11 494 aa15.81■□□□□ 0.12
PTCD2-212ENST00000543322 GPT2Q8TD30 523 aa15.81■□□□□ 0.12
PTCD2-212ENST00000543322 ESYT1Q9BSJ8 1104 aa15.81■□□□□ 0.12
PTCD2-212ENST00000543322 ESF1Q9H501 851 aaKnown RBP15.81■□□□□ 0.12
PTCD2-212ENST00000543322 DIP2AQ14689 1571 aa15.81■□□□□ 0.12
PTCD2-212ENST00000543322 NWD1Q149M9 1564 aa15.81■□□□□ 0.12
PTCD2-212ENST00000543322 MCM2P49736 904 aa15.8■□□□□ 0.12
PTCD2-212ENST00000543322 HTATSF1O43719 755 aaKnown RBP15.8■□□□□ 0.12
PTCD2-212ENST00000543322 STK31Q9BXU1 1019 aa15.8■□□□□ 0.12
PTCD2-212ENST00000543322 LRRCC1Q9C099 1032 aa15.8■□□□□ 0.12
PTCD2-212ENST00000543322 EXOC6BQ9Y2D4 811 aa15.8■□□□□ 0.12
PTCD2-212ENST00000543322 RGPD8O14715 1765 aaPredicted RBP15.79■□□□□ 0.12
PTCD2-212ENST00000543322 GNAI3P08754 354 aa15.79■□□□□ 0.12
PTCD2-212ENST00000543322 MX1P20591 662 aa15.79■□□□□ 0.12
PTCD2-212ENST00000543322 ANAPC15P60006 121 aa15.79■□□□□ 0.12
PTCD2-212ENST00000543322 CUL4AQ13619 759 aa15.79■□□□□ 0.12
PTCD2-212ENST00000543322 HS1BP3Q53T59 392 aa15.79■□□□□ 0.12
PTCD2-212ENST00000543322 TMX3Q96JJ7 454 aa15.79■□□□□ 0.12
PTCD2-212ENST00000543322 STAP2Q9UGK3 403 aa15.79■□□□□ 0.12
PTCD2-212ENST00000543322 SOS1Q07889 1333 aaPredicted RBP15.79■□□□□ 0.12
PTCD2-212ENST00000543322 KIF13AQ9H1H9 1805 aa15.79■□□□□ 0.12
PTCD2-212ENST00000543322 PRPF40AO75400 957 aaKnown RBP15.78■□□□□ 0.12
PTCD2-212ENST00000543322 NCLP19338 710 aaKnown RBP15.78■□□□□ 0.12
PTCD2-212ENST00000543322 FLIIQ13045 1269 aa15.78■□□□□ 0.12
PTCD2-212ENST00000543322 PDLIM2Q96JY6 352 aa15.78■□□□□ 0.12
PTCD2-212ENST00000543322 RBSNQ9H1K0 784 aa15.78■□□□□ 0.12
PTCD2-212ENST00000543322 AOX1Q06278 1338 aa15.78■□□□□ 0.12
PTCD2-212ENST00000543322 ATP8B2P98198 1209 aa15.78■□□□□ 0.12
PTCD2-212ENST00000543322 MCCP23508 829 aa15.77■□□□□ 0.12
PTCD2-212ENST00000543322 NEK4P51957 841 aa15.77■□□□□ 0.12
PTCD2-212ENST00000543322 EYA1Q99502 592 aa15.77■□□□□ 0.12
PTCD2-212ENST00000543322 PNMA6EA0A0J9YXQ4 647 aa15.77■□□□□ 0.11
PTCD2-212ENST00000543322 NUTM2FA1L443 756 aa15.77■□□□□ 0.11
PTCD2-212ENST00000543322 BRD1O95696 1058 aa15.77■□□□□ 0.11
PTCD2-212ENST00000543322 CHMLP26374 656 aa15.77■□□□□ 0.11
PTCD2-212ENST00000543322 PRIM1P49642 420 aaKnown RBP15.77■□□□□ 0.11
PTCD2-212ENST00000543322 CCDC30Q5VVM6 783 aa15.77■□□□□ 0.11
PTCD2-212ENST00000543322 TSHZ3Q63HK5 1081 aa15.77■□□□□ 0.11
PTCD2-212ENST00000543322 RBM27Q9P2N5 1060 aaKnown RBP15.77■□□□□ 0.11
PTCD2-212ENST00000543322 SOX12O15370 315 aa15.76■□□□□ 0.11
PTCD2-212ENST00000543322 TPM2P07951 284 aa15.76■□□□□ 0.11
PTCD2-212ENST00000543322 LTKP29376 864 aa15.76■□□□□ 0.11
PTCD2-212ENST00000543322 INTS4Q96HW7 963 aaKnown RBP15.76■□□□□ 0.11
PTCD2-212ENST00000543322 SRCIN1Q9C0H9 1055 aa15.76■□□□□ 0.11
PTCD2-212ENST00000543322 TMEM63CQ9P1W3 806 aa15.76■□□□□ 0.11
PTCD2-212ENST00000543322 PALD1Q9ULE6 856 aa15.76■□□□□ 0.11
PTCD2-212ENST00000543322 MBD3O95983 291 aa15.75■□□□□ 0.11
PTCD2-212ENST00000543322 LRSAM1Q6UWE0 723 aa15.75■□□□□ 0.11
PTCD2-212ENST00000543322 SLIT1O75093 1534 aa15.75■□□□□ 0.11
PTCD2-212ENST00000543322 CRYBG1Q9Y4K1 1723 aa15.75■□□□□ 0.11
PTCD2-212ENST00000543322 EPB41L2O43491 1005 aaKnown RBP15.75■□□□□ 0.11
PTCD2-212ENST00000543322 FKBP5Q13451 457 aaPredicted RBP15.75■□□□□ 0.11
PTCD2-212ENST00000543322 RRP9O43818 475 aaKnown RBP15.74■□□□□ 0.11
PTCD2-212ENST00000543322 BABAM1Q9NWV8 329 aa15.74■□□□□ 0.11
PTCD2-212ENST00000543322 MAP3K5Q99683 1374 aa15.74■□□□□ 0.11
PTCD2-212ENST00000543322 ARHGAP23Q9P227 1491 aa15.74■□□□□ 0.11
PTCD2-212ENST00000543322 OFD1O75665 1012 aa15.73■□□□□ 0.11
PTCD2-212ENST00000543322 MED1Q15648 1581 aaPredicted RBP15.73■□□□□ 0.11
PTCD2-212ENST00000543322 GNAT3A8MTJ3 354 aa15.73■□□□□ 0.11
PTCD2-212ENST00000543322 MSNP26038 577 aaKnown RBP15.73■□□□□ 0.11
PTCD2-212ENST00000543322 AMPHP49418 695 aa15.73■□□□□ 0.11
PTCD2-212ENST00000543322 CHAMP1Q96JM3 812 aa15.73■□□□□ 0.11
PTCD2-212ENST00000543322 ANO2Q9NQ90 1003 aa15.73■□□□□ 0.11
PTCD2-212ENST00000543322 NSFL1CQ9UNZ2 370 aaKnown RBP15.73■□□□□ 0.11
PTCD2-212ENST00000543322 LRRFIP2Q9Y608 721 aaKnown RBP15.73■□□□□ 0.11
PTCD2-212ENST00000543322 NOL7Q9UMY1 257 aaKnown RBP15.72■□□□□ 0.11
PTCD2-212ENST00000543322 ANKARQ7Z5J8 1434 aa15.71■□□□□ 0.11
PTCD2-212ENST00000543322 TRIM6-TRIM34B2RNG4 842 aa15.71■□□□□ 0.11
PTCD2-212ENST00000543322 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.71■□□□□ 0.11
PTCD2-212ENST00000543322 SSH3Q8TE77 659 aa15.71■□□□□ 0.11
PTCD2-212ENST00000543322 RILPL2Q969X0 211 aa15.71■□□□□ 0.11
PTCD2-212ENST00000543322 SYCE3A1L190 88 aa15.7■□□□□ 0.1
PTCD2-212ENST00000543322 ZNF500O60304 480 aaPredicted RBP15.7■□□□□ 0.1
PTCD2-212ENST00000543322 UNC5CLQ8IV45 518 aa15.7■□□□□ 0.1
PTCD2-212ENST00000543322 USP44Q9H0E7 712 aa15.7■□□□□ 0.1
PTCD2-212ENST00000543322 KDM3BQ7LBC6 1761 aa15.7■□□□□ 0.1
PTCD2-212ENST00000543322 HOXC9P31274 260 aa15.7■□□□□ 0.1
PTCD2-212ENST00000543322 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.7■□□□□ 0.1
PTCD2-212ENST00000543322 UBTFL1P0CB47 393 aaPredicted RBP15.69■□□□□ 0.1
PTCD2-212ENST00000543322 HSPA4P34932 840 aa15.69■□□□□ 0.1
PTCD2-212ENST00000543322 TERF1P54274 439 aa15.69■□□□□ 0.1
PTCD2-212ENST00000543322 POLA2Q14181 598 aa15.69■□□□□ 0.1
PTCD2-212ENST00000543322 HSP90AA2PQ14568 343 aaPredicted RBP15.69■□□□□ 0.1
PTCD2-212ENST00000543322 FOXD4L5Q5VV16 416 aaPredicted RBP15.69■□□□□ 0.1
PTCD2-212ENST00000543322 KIAA1211Q6ZU35 1233 aa15.69■□□□□ 0.1
PTCD2-212ENST00000543322 NGDNQ8NEJ9 315 aaKnown RBP15.69■□□□□ 0.1
PTCD2-212ENST00000543322 IL17REQ8NFR9 667 aa15.69■□□□□ 0.1
PTCD2-212ENST00000543322 FOXD4L4Q8WXT5 416 aaPredicted RBP15.69■□□□□ 0.1
PTCD2-212ENST00000543322 SLC26A8Q96RN1 970 aa15.69■□□□□ 0.1
PTCD2-212ENST00000543322 AMOTL2Q9Y2J4 779 aa15.69■□□□□ 0.1
PTCD2-212ENST00000543322 RAB11FIP3O75154 756 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms