RNA–Protein interactions for RNA: ENST00000543025.5

KDM2B-216, Transcript of lysine demethylase 2B, humanhuman

TSL 1 (best)

Gene KDM2B, Length 2,522 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM2B-216ENST00000543025 GAS2L3Q86XJ1 694 aa20.42■□□□□ 0.86
KDM2B-216ENST00000543025 ARHGEF10O15013 1369 aa20.42■□□□□ 0.86
KDM2B-216ENST00000543025 SMARCA5O60264 1052 aaPredicted RBP20.42■□□□□ 0.86
KDM2B-216ENST00000543025 TRPM3Q9HCF6 1732 aaPredicted RBP20.41■□□□□ 0.86
KDM2B-216ENST00000543025 APBB1O00213 710 aa20.41■□□□□ 0.86
KDM2B-216ENST00000543025 FOXO3O43524 673 aa20.41■□□□□ 0.86
KDM2B-216ENST00000543025 BAG4O95429 457 aaKnown RBP20.41■□□□□ 0.86
KDM2B-216ENST00000543025 NUCB2P80303 420 aa20.41■□□□□ 0.86
KDM2B-216ENST00000543025 PIK3C2AO00443 1686 aa20.41■□□□□ 0.86
KDM2B-216ENST00000543025 BRINP3Q76B58 766 aa20.41■□□□□ 0.86
KDM2B-216ENST00000543025 REC8O95072 547 aa20.4■□□□□ 0.86
KDM2B-216ENST00000543025 KLHL40Q2TBA0 621 aa20.4■□□□□ 0.86
KDM2B-216ENST00000543025 RTF1Q92541 710 aaKnown RBP20.4■□□□□ 0.86
KDM2B-216ENST00000543025 ST18O60284 1047 aa20.39■□□□□ 0.85
KDM2B-216ENST00000543025 CCT4P50991 539 aaKnown RBP20.39■□□□□ 0.85
KDM2B-216ENST00000543025 MAP3K19Q56UN5 1328 aa20.39■□□□□ 0.85
KDM2B-216ENST00000543025 IBTKQ9P2D0 1353 aaPredicted RBP20.39■□□□□ 0.85
KDM2B-216ENST00000543025 PSME1Q06323 249 aa20.38■□□□□ 0.85
KDM2B-216ENST00000543025 TSPYL4Q9UJ04 414 aa20.38■□□□□ 0.85
KDM2B-216ENST00000543025 DDX49Q9Y6V7 483 aaKnown RBP20.38■□□□□ 0.85
KDM2B-216ENST00000543025 ROBO1Q9Y6N7 1651 aa20.38■□□□□ 0.85
KDM2B-216ENST00000543025 XPCQ01831 940 aaPredicted RBP20.37■□□□□ 0.85
KDM2B-216ENST00000543025 OSBPL3Q9H4L5 887 aa20.37■□□□□ 0.85
KDM2B-216ENST00000543025 CWC22Q9HCG8 908 aaKnown RBP20.37■□□□□ 0.85
KDM2B-216ENST00000543025 MIS18AQ9NYP9 233 aa20.37■□□□□ 0.85
KDM2B-216ENST00000543025 SOX12O15370 315 aa20.37■□□□□ 0.85
KDM2B-216ENST00000543025 MTHFSDQ2M296 383 aaKnown RBP20.37■□□□□ 0.85
KDM2B-216ENST00000543025 DDX17Q92841 729 aaKnown RBP20.37■□□□□ 0.85
KDM2B-216ENST00000543025 TTC21AQ8NDW8 1320 aa20.37■□□□□ 0.85
KDM2B-216ENST00000543025 NHSL1Q5SYE7 1610 aa20.37■□□□□ 0.85
KDM2B-216ENST00000543025 MARF1Q9Y4F3 1742 aaKnown RBP20.37■□□□□ 0.85
KDM2B-216ENST00000543025 CYP2E1P05181 493 aaPredicted RBP20.36■□□□□ 0.85
KDM2B-216ENST00000543025 SLC4A10Q6U841 1118 aa20.36■□□□□ 0.85
KDM2B-216ENST00000543025 ERC2O15083 957 aa20.36■□□□□ 0.85
KDM2B-216ENST00000543025 TRIM44Q96DX7 344 aaPredicted RBP20.36■□□□□ 0.85
KDM2B-216ENST00000543025 FLT4P35916 1363 aa20.36■□□□□ 0.85
KDM2B-216ENST00000543025 USP54Q70EL1 1684 aa20.36■□□□□ 0.85
KDM2B-216ENST00000543025 SBNO1A3KN83 1393 aa20.35■□□□□ 0.85
KDM2B-216ENST00000543025 KDRP35968 1356 aa20.35■□□□□ 0.85
KDM2B-216ENST00000543025 PXDNQ92626 1479 aa20.35■□□□□ 0.85
KDM2B-216ENST00000543025 G2E3Q7L622 706 aa20.35■□□□□ 0.85
KDM2B-216ENST00000543025 F6X3S4 739 aa20.34■□□□□ 0.85
KDM2B-216ENST00000543025 NPHP3Q7Z494 1330 aa20.34■□□□□ 0.85
KDM2B-216ENST00000543025 ALS2Q96Q42 1657 aa20.34■□□□□ 0.85
KDM2B-216ENST00000543025 ESPNB1AK53 854 aa20.34■□□□□ 0.85
KDM2B-216ENST00000543025 PDE1AP54750 535 aa20.34■□□□□ 0.85
KDM2B-216ENST00000543025 KRT28Q7Z3Y7 464 aa20.34■□□□□ 0.85
KDM2B-216ENST00000543025 AK9Q5TCS8 1911 aa20.33■□□□□ 0.85
KDM2B-216ENST00000543025 GNAI2P04899 355 aa20.33■□□□□ 0.84
KDM2B-216ENST00000543025 MCTP1Q6DN14 999 aa20.33■□□□□ 0.84
KDM2B-216ENST00000543025 STK31Q9BXU1 1019 aa20.32■□□□□ 0.84
KDM2B-216ENST00000543025 IGSF1Q8N6C5 1336 aa20.32■□□□□ 0.84
KDM2B-216ENST00000543025 CERKQ8TCT0 537 aa20.31■□□□□ 0.84
KDM2B-216ENST00000543025 NASPP49321 788 aaPredicted RBP20.3■□□□□ 0.84
KDM2B-216ENST00000543025 PKP1Q13835 747 aa20.3■□□□□ 0.84
KDM2B-216ENST00000543025 HTATSF1O43719 755 aaKnown RBP20.29■□□□□ 0.84
KDM2B-216ENST00000543025 AMPHP49418 695 aa20.29■□□□□ 0.84
KDM2B-216ENST00000543025 CCDC173Q0VFZ6 552 aa20.29■□□□□ 0.84
KDM2B-216ENST00000543025 ZGPATQ8N5A5 531 aaKnown RBP20.29■□□□□ 0.84
KDM2B-216ENST00000543025 ABTB2Q8N961 1025 aa20.29■□□□□ 0.84
KDM2B-216ENST00000543025 EYA1Q99502 592 aa20.29■□□□□ 0.84
KDM2B-216ENST00000543025 LMBRD1Q9NUN5 540 aa20.29■□□□□ 0.84
KDM2B-216ENST00000543025 EXOC6BQ9Y2D4 811 aa20.29■□□□□ 0.84
KDM2B-216ENST00000543025 ERBB4Q15303 1308 aa20.29■□□□□ 0.84
KDM2B-216ENST00000543025 TOM1O60784 492 aa20.28■□□□□ 0.84
KDM2B-216ENST00000543025 GNAI3P08754 354 aa20.28■□□□□ 0.84
KDM2B-216ENST00000543025 ZNF445P59923 1031 aa20.28■□□□□ 0.84
KDM2B-216ENST00000543025 NUTM2GQ5VZR2 741 aa20.28■□□□□ 0.84
KDM2B-216ENST00000543025 LRRCC1Q9C099 1032 aa20.28■□□□□ 0.84
KDM2B-216ENST00000543025 SALL3Q9BXA9 1300 aa20.28■□□□□ 0.84
KDM2B-216ENST00000543025 LRRC37A3O60309 1634 aa20.28■□□□□ 0.84
KDM2B-216ENST00000543025 FLIIQ13045 1269 aa20.28■□□□□ 0.84
KDM2B-216ENST00000543025 CCDC30Q5VVM6 783 aa20.28■□□□□ 0.84
KDM2B-216ENST00000543025 ANP32BQ92688 251 aaKnown RBP20.28■□□□□ 0.84
KDM2B-216ENST00000543025 AHDC1Q5TGY3 1603 aaPredicted RBP20.28■□□□□ 0.84
KDM2B-216ENST00000543025 NAP1L5Q96NT1 182 aaPredicted RBP20.27■□□□□ 0.84
KDM2B-216ENST00000543025 TNS3Q68CZ2 1445 aa20.27■□□□□ 0.84
KDM2B-216ENST00000543025 FAM208AQ9UK61 1670 aaKnown RBP20.27■□□□□ 0.84
KDM2B-216ENST00000543025 NLRP6P59044 892 aa20.27■□□□□ 0.84
KDM2B-216ENST00000543025 SOS2Q07890 1332 aaPredicted RBP20.27■□□□□ 0.83
KDM2B-216ENST00000543025 UBAP1LF5GYI3 381 aa20.26■□□□□ 0.83
KDM2B-216ENST00000543025 FKBP5Q13451 457 aaPredicted RBP20.26■□□□□ 0.83
KDM2B-216ENST00000543025 PPP1R9BQ96SB3 815 aa20.26■□□□□ 0.83
KDM2B-216ENST00000543025 CAVIN1Q6NZI2 390 aaKnown RBP20.26■□□□□ 0.83
KDM2B-216ENST00000543025 MX1P20591 662 aa20.25■□□□□ 0.83
KDM2B-216ENST00000543025 TUBGCP6Q96RT7 1819 aa20.25■□□□□ 0.83
KDM2B-216ENST00000543025 NCLP19338 710 aaKnown RBP20.25■□□□□ 0.83
KDM2B-216ENST00000543025 MCM2P49736 904 aa20.25■□□□□ 0.83
KDM2B-216ENST00000543025 ESYT1Q9BSJ8 1104 aa20.25■□□□□ 0.83
KDM2B-216ENST00000543025 GNAT3A8MTJ3 354 aa20.24■□□□□ 0.83
KDM2B-216ENST00000543025 MCCP23508 829 aa20.24■□□□□ 0.83
KDM2B-216ENST00000543025 ATP8B2P98198 1209 aa20.24■□□□□ 0.83
KDM2B-216ENST00000543025 ZSCAN23Q3MJ62 389 aa20.24■□□□□ 0.83
KDM2B-216ENST00000543025 LMOD2Q6P5Q4 547 aa20.24■□□□□ 0.83
KDM2B-216ENST00000543025 SOS1Q07889 1333 aaPredicted RBP20.24■□□□□ 0.83
KDM2B-216ENST00000543025 NEK4P51957 841 aa20.24■□□□□ 0.83
KDM2B-216ENST00000543025 PIP4K2BP78356 416 aa20.24■□□□□ 0.83
KDM2B-216ENST00000543025 ZDHHC9Q9Y397 364 aa20.24■□□□□ 0.83
KDM2B-216ENST00000543025 SPATA31A3Q5VYP0 1347 aa20.24■□□□□ 0.83
KDM2B-216ENST00000543025 PNMA6EA0A0J9YXQ4 647 aa20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms