RNA–Protein interactions for RNA: ENST00000542557.5

PTPRO-208, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRO, Length 2,946 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-208ENST00000542557 CAMTA1Q9Y6Y1 1673 aa8.11□□□□□ -1.11
PTPRO-208ENST00000542557 MCM4P33991 863 aa8.11□□□□□ -1.11
PTPRO-208ENST00000542557 FLIIQ13045 1269 aa8.11□□□□□ -1.11
PTPRO-208ENST00000542557 TAF7Q15545 349 aaPredicted RBP8.11□□□□□ -1.11
PTPRO-208ENST00000542557 OSBPL3Q9H4L5 887 aa8.11□□□□□ -1.11
PTPRO-208ENST00000542557 LMTK3Q96Q04 1460 aa8.1□□□□□ -1.11
PTPRO-208ENST00000542557 GNAI2P04899 355 aa8.1□□□□□ -1.11
PTPRO-208ENST00000542557 GNAI3P08754 354 aa8.1□□□□□ -1.11
PTPRO-208ENST00000542557 KCNH5Q8NCM2 988 aa8.1□□□□□ -1.11
PTPRO-208ENST00000542557 IL17REQ8NFR9 667 aa8.1□□□□□ -1.11
PTPRO-208ENST00000542557 SETD1BQ9UPS6 1966 aaKnown RBP8.1□□□□□ -1.11
PTPRO-208ENST00000542557 OVOS2A0A0G2JMS6 1433 aa8.1□□□□□ -1.11
PTPRO-208ENST00000542557 K7ELQ4 463 aaPredicted RBP8.09□□□□□ -1.11
PTPRO-208ENST00000542557 HMGB1P09429 215 aaKnown RBP8.09□□□□□ -1.11
PTPRO-208ENST00000542557 HOXB7P09629 217 aa8.09□□□□□ -1.11
PTPRO-208ENST00000542557 NUTM2GQ5VZR2 741 aa8.09□□□□□ -1.11
PTPRO-208ENST00000542557 CASC1Q6TDU7 716 aa8.09□□□□□ -1.11
PTPRO-208ENST00000542557 NPHP4O75161 1426 aaPredicted RBP8.09□□□□□ -1.11
PTPRO-208ENST00000542557 KIF1AQ12756 1690 aa8.09□□□□□ -1.11
PTPRO-208ENST00000542557 DDX11L8A8MPP1 907 aa8.09□□□□□ -1.11
PTPRO-208ENST00000542557 F6X3S4 739 aa8.09□□□□□ -1.11
PTPRO-208ENST00000542557 HSP90AB1P08238 724 aaKnown RBP8.09□□□□□ -1.11
PTPRO-208ENST00000542557 SLC4A10Q6U841 1118 aa8.09□□□□□ -1.11
PTPRO-208ENST00000542557 C16orf71Q8IYS4 520 aaPredicted RBP8.09□□□□□ -1.11
PTPRO-208ENST00000542557 CHMP4AQ9BY43 222 aa8.09□□□□□ -1.11
PTPRO-208ENST00000542557 TRPM3Q9HCF6 1732 aaPredicted RBP8.09□□□□□ -1.11
PTPRO-208ENST00000542557 FKBP5Q13451 457 aaPredicted RBP8.09□□□□□ -1.12
PTPRO-208ENST00000542557 RABEP1Q15276 862 aa8.09□□□□□ -1.12
PTPRO-208ENST00000542557 PPP4R3CPQ6ZMV5 832 aa8.09□□□□□ -1.12
PTPRO-208ENST00000542557 SPRYD3Q8NCJ5 442 aa8.09□□□□□ -1.12
PTPRO-208ENST00000542557 SALL3Q9BXA9 1300 aa8.08□□□□□ -1.12
PTPRO-208ENST00000542557 SDSP20132 328 aa8.08□□□□□ -1.12
PTPRO-208ENST00000542557 OTUD7AQ8TE49 926 aaPredicted RBP8.08□□□□□ -1.12
PTPRO-208ENST00000542557 CNKSR2Q8WXI2 1034 aa8.08□□□□□ -1.12
PTPRO-208ENST00000542557 MST1RQ04912 1400 aa8.08□□□□□ -1.12
PTPRO-208ENST00000542557 USP26Q9BXU7 913 aa8.08□□□□□ -1.12
PTPRO-208ENST00000542557 IBTKQ9P2D0 1353 aaPredicted RBP8.08□□□□□ -1.12
PTPRO-208ENST00000542557 RGPD2P0DJD1 1756 aa8.08□□□□□ -1.12
PTPRO-208ENST00000542557 SMARCA5O60264 1052 aaPredicted RBP8.07□□□□□ -1.12
PTPRO-208ENST00000542557 RAB3GAP1Q15042 981 aa8.07□□□□□ -1.12
PTPRO-208ENST00000542557 LTV1Q96GA3 475 aaPredicted RBP8.07□□□□□ -1.12
PTPRO-208ENST00000542557 ADAMTS7Q9UKP4 1686 aa8.07□□□□□ -1.12
PTPRO-208ENST00000542557 PTMSP20962 102 aa8.07□□□□□ -1.12
PTPRO-208ENST00000542557 PDE1AP54750 535 aa8.07□□□□□ -1.12
PTPRO-208ENST00000542557 ATP8B2P98198 1209 aa8.07□□□□□ -1.12
PTPRO-208ENST00000542557 L1TD1Q5T7N2 865 aaKnown RBP8.07□□□□□ -1.12
PTPRO-208ENST00000542557 NBPF6Q5VWK0 638 aa8.07□□□□□ -1.12
PTPRO-208ENST00000542557 NBPF4Q96M43 638 aa8.07□□□□□ -1.12
PTPRO-208ENST00000542557 REC8O95072 547 aa8.06□□□□□ -1.12
PTPRO-208ENST00000542557 CD2BP2O95400 341 aaKnown RBP8.06□□□□□ -1.12
PTPRO-208ENST00000542557 PSME1Q06323 249 aa8.06□□□□□ -1.12
PTPRO-208ENST00000542557 ESCO1Q5FWF5 840 aa8.06□□□□□ -1.12
PTPRO-208ENST00000542557 AKAP4Q5JQC9 854 aa8.06□□□□□ -1.12
PTPRO-208ENST00000542557 HDGFL1Q5TGJ6 251 aa8.06□□□□□ -1.12
PTPRO-208ENST00000542557 AOX1Q06278 1338 aa8.06□□□□□ -1.12
PTPRO-208ENST00000542557 EIF4A1P60842 406 aaKnown RBP8.06□□□□□ -1.12
PTPRO-208ENST00000542557 USHBP1Q8N6Y0 703 aa8.06□□□□□ -1.12
PTPRO-208ENST00000542557 GBP4Q96PP9 640 aa8.06□□□□□ -1.12
PTPRO-208ENST00000542557 LRRCC1Q9C099 1032 aa8.06□□□□□ -1.12
PTPRO-208ENST00000542557 CCDC9Q9Y3X0 531 aaKnown RBP8.06□□□□□ -1.12
PTPRO-208ENST00000542557 SIPA1L3O60292 1781 aaPredicted RBP8.06□□□□□ -1.12
PTPRO-208ENST00000542557 TRHP20396 242 aaPredicted RBP8.06□□□□□ -1.12
PTPRO-208ENST00000542557 AMOTQ4VCS5 1084 aa8.06□□□□□ -1.12
PTPRO-208ENST00000542557 ERC2O15083 957 aa8.05□□□□□ -1.12
PTPRO-208ENST00000542557 TRAK2O60296 914 aa8.05□□□□□ -1.12
PTPRO-208ENST00000542557 CLEC17AQ6ZS10 378 aa8.05□□□□□ -1.12
PTPRO-208ENST00000542557 ARHGEF25Q86VW2 580 aa8.05□□□□□ -1.12
PTPRO-208ENST00000542557 IL27Q8NEV9 243 aa8.05□□□□□ -1.12
PTPRO-208ENST00000542557 TNPO1Q92973 898 aaKnown RBP8.05□□□□□ -1.12
PTPRO-208ENST00000542557 RBM42Q9BTD8 480 aaKnown RBP8.05□□□□□ -1.12
PTPRO-208ENST00000542557 SRCIN1Q9C0H9 1055 aa8.05□□□□□ -1.12
PTPRO-208ENST00000542557 STAP2Q9UGK3 403 aa8.05□□□□□ -1.12
PTPRO-208ENST00000542557 ABCC6O95255 1503 aa8.05□□□□□ -1.12
PTPRO-208ENST00000542557 PNMA6EA0A0J9YXQ4 647 aa8.05□□□□□ -1.12
PTPRO-208ENST00000542557 APBB1O00213 710 aa8.05□□□□□ -1.12
PTPRO-208ENST00000542557 HSP90AA1P07900 732 aaKnown RBP8.05□□□□□ -1.12
PTPRO-208ENST00000542557 UBTFL1P0CB47 393 aaPredicted RBP8.05□□□□□ -1.12
PTPRO-208ENST00000542557 MX1P20591 662 aa8.05□□□□□ -1.12
PTPRO-208ENST00000542557 CDK11BP21127 795 aaKnown RBP8.05□□□□□ -1.12
PTPRO-208ENST00000542557 PLEKHO1Q53GL0 409 aaPredicted RBP8.05□□□□□ -1.12
PTPRO-208ENST00000542557 USP44Q9H0E7 712 aa8.05□□□□□ -1.12
PTPRO-208ENST00000542557 BRPF3Q9ULD4 1205 aa8.05□□□□□ -1.12
PTPRO-208ENST00000542557 EXOC6BQ9Y2D4 811 aa8.05□□□□□ -1.12
PTPRO-208ENST00000542557 ALS2Q96Q42 1657 aa8.05□□□□□ -1.12
PTPRO-208ENST00000542557 PXDNQ92626 1479 aa8.04□□□□□ -1.12
PTPRO-208ENST00000542557 FSD2A1L4K1 749 aa8.04□□□□□ -1.12
PTPRO-208ENST00000542557 PDIA4P13667 645 aaKnown RBP8.04□□□□□ -1.12
PTPRO-208ENST00000542557 SSH3Q8TE77 659 aa8.04□□□□□ -1.12
PTPRO-208ENST00000542557 ISY1Q9ULR0 285 aaKnown RBP8.04□□□□□ -1.12
PTPRO-208ENST00000542557 LRRFIP2Q9Y608 721 aaKnown RBP8.04□□□□□ -1.12
PTPRO-208ENST00000542557 GCP02774 474 aa8.04□□□□□ -1.12
PTPRO-208ENST00000542557 NECTIN2Q92692 538 aa8.04□□□□□ -1.12
PTPRO-208ENST00000542557 PLEKHG2Q9H7P9 1386 aa8.04□□□□□ -1.12
PTPRO-208ENST00000542557 EPB41L2O43491 1005 aaKnown RBP8.03□□□□□ -1.12
PTPRO-208ENST00000542557 ST18O60284 1047 aa8.03□□□□□ -1.12
PTPRO-208ENST00000542557 RAB11FIP3O75154 756 aa8.03□□□□□ -1.12
PTPRO-208ENST00000542557 POLA2Q14181 598 aa8.03□□□□□ -1.12
PTPRO-208ENST00000542557 ZNF530Q6P9A1 599 aaPredicted RBP8.03□□□□□ -1.12
PTPRO-208ENST00000542557 BBXQ8WY36 941 aaPredicted RBP8.03□□□□□ -1.12
PTPRO-208ENST00000542557 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms