RNA–Protein interactions for RNA: ENST00000542133.5

NPIPB4-215, Transcript of nuclear pore complex interacting protein family member B4, humanhuman

TSL 3

Gene NPIPB4, Length 910 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4-215ENST00000542133 SPDYE4A6NLX3 237 aa11.03□□□□□ -0.64
NPIPB4-215ENST00000542133 EVC2Q86UK5 1308 aa11.03□□□□□ -0.64
NPIPB4-215ENST00000542133 FSTL1Q12841 308 aa11.02□□□□□ -0.65
NPIPB4-215ENST00000542133 AMIGO3Q86WK7 504 aa11.02□□□□□ -0.65
NPIPB4-215ENST00000542133 C10orf71Q711Q0 1435 aa11.01□□□□□ -0.65
NPIPB4-215ENST00000542133 N4BP2Q86UW6 1770 aaPredicted RBP11.01□□□□□ -0.65
NPIPB4-215ENST00000542133 TNRC6CQ9HCJ0 1690 aaKnown RBP11.01□□□□□ -0.65
NPIPB4-215ENST00000542133 PALLDQ8WX93 1383 aa11.01□□□□□ -0.65
NPIPB4-215ENST00000542133 PLEKHG2Q9H7P9 1386 aa11.01□□□□□ -0.65
NPIPB4-215ENST00000542133 SBNO2Q9Y2G9 1366 aa11.01□□□□□ -0.65
NPIPB4-215ENST00000542133 RGPD2P0DJD1 1756 aa11□□□□□ -0.65
NPIPB4-215ENST00000542133 CD163L1Q9NR16 1453 aa11□□□□□ -0.65
NPIPB4-215ENST00000542133 BRCA1P38398 1863 aaKnown RBP11□□□□□ -0.65
NPIPB4-215ENST00000542133 HSPA1AP0DMV8 641 aaKnown RBP11□□□□□ -0.65
NPIPB4-215ENST00000542133 HSPA1BP0DMV9 641 aaKnown RBP11□□□□□ -0.65
NPIPB4-215ENST00000542133 NME9Q86XW9 330 aa11□□□□□ -0.65
NPIPB4-215ENST00000542133 NSD3Q9BZ95 1437 aa11□□□□□ -0.65
NPIPB4-215ENST00000542133 KCPQ6ZWJ8 1503 aa10.99□□□□□ -0.65
NPIPB4-215ENST00000542133 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.99□□□□□ -0.65
NPIPB4-215ENST00000542133 C16orf71Q8IYS4 520 aaPredicted RBP10.99□□□□□ -0.65
NPIPB4-215ENST00000542133 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.98□□□□□ -0.65
NPIPB4-215ENST00000542133 PHF14O94880 888 aa10.98□□□□□ -0.65
NPIPB4-215ENST00000542133 ZCRB1Q8TBF4 217 aaKnown RBP10.98□□□□□ -0.65
NPIPB4-215ENST00000542133 AK7Q96M32 723 aa10.98□□□□□ -0.65
NPIPB4-215ENST00000542133 C19orf67A6NJJ6 358 aa10.97□□□□□ -0.65
NPIPB4-215ENST00000542133 HMGB2P26583 209 aaKnown RBP10.97□□□□□ -0.65
NPIPB4-215ENST00000542133 SMIM5Q71RC9 77 aa10.97□□□□□ -0.65
NPIPB4-215ENST00000542133 IP6K1Q92551 441 aa10.97□□□□□ -0.65
NPIPB4-215ENST00000542133 LTV1Q96GA3 475 aaPredicted RBP10.97□□□□□ -0.65
NPIPB4-215ENST00000542133 BCS1LQ9Y276 419 aa10.97□□□□□ -0.65
NPIPB4-215ENST00000542133 ARFGEF1Q9Y6D6 1849 aa10.97□□□□□ -0.65
NPIPB4-215ENST00000542133 MAP2P11137 1827 aaKnown RBP10.96□□□□□ -0.65
NPIPB4-215ENST00000542133 SSFA2P28290 1259 aa10.96□□□□□ -0.65
NPIPB4-215ENST00000542133 ITGB4P16144 1822 aa10.95□□□□□ -0.66
NPIPB4-215ENST00000542133 EDC4Q6P2E9 1401 aaKnown RBP10.95□□□□□ -0.66
NPIPB4-215ENST00000542133 C9orf131Q5VYM1 1079 aa10.95□□□□□ -0.66
NPIPB4-215ENST00000542133 ARHGAP27Q6ZUM4 889 aa10.95□□□□□ -0.66
NPIPB4-215ENST00000542133 KDM2BQ8NHM5 1336 aa10.94□□□□□ -0.66
NPIPB4-215ENST00000542133 TGFB2P61812 414 aa10.94□□□□□ -0.66
NPIPB4-215ENST00000542133 SMC1BQ8NDV3 1235 aa10.94□□□□□ -0.66
NPIPB4-215ENST00000542133 C4AP0C0L4 1744 aa10.94□□□□□ -0.66
NPIPB4-215ENST00000542133 A0A0G2JLW4 131 aa10.93□□□□□ -0.66
NPIPB4-215ENST00000542133 MMP10P09238 476 aa10.93□□□□□ -0.66
NPIPB4-215ENST00000542133 CGNL1Q0VF96 1302 aa10.92□□□□□ -0.66
NPIPB4-215ENST00000542133 MAP3K19Q56UN5 1328 aa10.92□□□□□ -0.66
NPIPB4-215ENST00000542133 FCHSD2O94868 740 aa10.92□□□□□ -0.66
NPIPB4-215ENST00000542133 HOXC9P31274 260 aa10.92□□□□□ -0.66
NPIPB4-215ENST00000542133 MPRIPQ6WCQ1 1025 aa10.92□□□□□ -0.66
NPIPB4-215ENST00000542133 RRAGCQ9HB90 399 aa10.92□□□□□ -0.66
NPIPB4-215ENST00000542133 PCDH11XQ9BZA7 1347 aa10.91□□□□□ -0.66
NPIPB4-215ENST00000542133 PCDH11YQ9BZA8 1340 aa10.91□□□□□ -0.66
NPIPB4-215ENST00000542133 PDIA4P13667 645 aaKnown RBP10.91□□□□□ -0.66
NPIPB4-215ENST00000542133 DPEP1P16444 411 aa10.91□□□□□ -0.66
NPIPB4-215ENST00000542133 LINC00116Q8NCU8 138 aa10.91□□□□□ -0.66
NPIPB4-215ENST00000542133 SMARCC1Q92922 1105 aaPredicted RBP10.91□□□□□ -0.66
NPIPB4-215ENST00000542133 PCDH10Q9P2E7 1040 aa10.91□□□□□ -0.66
NPIPB4-215ENST00000542133 FARP1Q9Y4F1 1045 aaPredicted RBP10.91□□□□□ -0.66
NPIPB4-215ENST00000542133 A0A1W2PP64 1363 aa10.9□□□□□ -0.66
NPIPB4-215ENST00000542133 RTL1A6NKG5 1358 aa10.9□□□□□ -0.66
NPIPB4-215ENST00000542133 GNPATO15228 680 aa10.9□□□□□ -0.66
NPIPB4-215ENST00000542133 RNF181Q9P0P0 153 aa10.9□□□□□ -0.66
NPIPB4-215ENST00000542133 SBF1O95248 1867 aa10.89□□□□□ -0.67
NPIPB4-215ENST00000542133 TRIM26Q12899 539 aaPredicted RBP10.89□□□□□ -0.67
NPIPB4-215ENST00000542133 NBPF6Q5VWK0 638 aa10.89□□□□□ -0.67
NPIPB4-215ENST00000542133 USHBP1Q8N6Y0 703 aa10.89□□□□□ -0.67
NPIPB4-215ENST00000542133 NBPF4Q96M43 638 aa10.89□□□□□ -0.67
NPIPB4-215ENST00000542133 LOC102724428A0A0B4J2F2 783 aa10.88□□□□□ -0.67
NPIPB4-215ENST00000542133 SIK1P57059 783 aa10.88□□□□□ -0.67
NPIPB4-215ENST00000542133 HDGFL2Q7Z4V5 671 aaPredicted RBP10.88□□□□□ -0.67
NPIPB4-215ENST00000542133 TIAM2Q8IVF5 1701 aa10.88□□□□□ -0.67
NPIPB4-215ENST00000542133 RAPGEF4Q8WZA2 1011 aa10.88□□□□□ -0.67
NPIPB4-215ENST00000542133 DCAF5Q96JK2 942 aa10.88□□□□□ -0.67
NPIPB4-215ENST00000542133 ROCK2O75116 1388 aaKnown RBP10.88□□□□□ -0.67
NPIPB4-215ENST00000542133 KDM6AO15550 1401 aaPredicted RBP10.87□□□□□ -0.67
NPIPB4-215ENST00000542133 SMG6Q86US8 1419 aaKnown RBP10.87□□□□□ -0.67
NPIPB4-215ENST00000542133 CYP27B1O15528 508 aa10.87□□□□□ -0.67
NPIPB4-215ENST00000542133 CD44P16070 742 aaKnown RBP10.87□□□□□ -0.67
NPIPB4-215ENST00000542133 TATP17735 454 aaPredicted RBP10.87□□□□□ -0.67
NPIPB4-215ENST00000542133 KCNA3P22001 575 aa10.87□□□□□ -0.67
NPIPB4-215ENST00000542133 AMPHP49418 695 aa10.87□□□□□ -0.67
NPIPB4-215ENST00000542133 ITPK1Q13572 414 aa10.87□□□□□ -0.67
NPIPB4-215ENST00000542133 PIGBQ92521 554 aa10.87□□□□□ -0.67
NPIPB4-215ENST00000542133 CCDC87Q9NVE4 849 aa10.87□□□□□ -0.67
NPIPB4-215ENST00000542133 ZC3H4Q9UPT8 1303 aaKnown RBP10.86□□□□□ -0.67
NPIPB4-215ENST00000542133 FAM161AQ3B820 660 aa10.86□□□□□ -0.67
NPIPB4-215ENST00000542133 TMC1Q8TDI8 760 aa10.86□□□□□ -0.67
NPIPB4-215ENST00000542133 SLC12A5Q9H2X9 1139 aa10.86□□□□□ -0.67
NPIPB4-215ENST00000542133 COL5A3P25940 1745 aaPredicted RBP10.86□□□□□ -0.67
NPIPB4-215ENST00000542133 FOXN1O15353 648 aa10.85□□□□□ -0.67
NPIPB4-215ENST00000542133 FBLN1P23142 703 aa10.85□□□□□ -0.67
NPIPB4-215ENST00000542133 NLGN1Q8N2Q7 840 aa10.85□□□□□ -0.67
NPIPB4-215ENST00000542133 PRDM10Q9NQV6 1147 aa10.85□□□□□ -0.67
NPIPB4-215ENST00000542133 PIM2Q9P1W9 311 aa10.85□□□□□ -0.67
NPIPB4-215ENST00000542133 KDRP35968 1356 aa10.85□□□□□ -0.67
NPIPB4-215ENST00000542133 ZNF831Q5JPB2 1677 aa10.85□□□□□ -0.67
NPIPB4-215ENST00000542133 TMF1P82094 1093 aa10.84□□□□□ -0.67
NPIPB4-215ENST00000542133 DALRD3Q5D0E6 543 aaKnown RBP10.84□□□□□ -0.67
NPIPB4-215ENST00000542133 UBE2Q2Q8WVN8 375 aa10.84□□□□□ -0.67
NPIPB4-215ENST00000542133 COG3Q96JB2 828 aa10.84□□□□□ -0.67
NPIPB4-215ENST00000542133 TERF2IPQ9NYB0 399 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms