RNA–Protein interactions for RNA: ENST00000542107.5

CX3CR1-206, Transcript of C-X3-C motif chemokine receptor 1, humanhuman

APPRIS P1 TSL 4 BASIC

Gene CX3CR1, Length 3,215 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1-206ENST00000542107 LRRCC1Q9C099 1032 aa12.33□□□□□ -0.43
CX3CR1-206ENST00000542107 ANO2Q9NQ90 1003 aa12.33□□□□□ -0.43
CX3CR1-206ENST00000542107 KNDC1Q76NI1 1749 aa12.33□□□□□ -0.43
CX3CR1-206ENST00000542107 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.33□□□□□ -0.43
CX3CR1-206ENST00000542107 HDGFL1Q5TGJ6 251 aa12.33□□□□□ -0.44
CX3CR1-206ENST00000542107 C3P01024 1663 aa12.33□□□□□ -0.44
CX3CR1-206ENST00000542107 USP31Q70CQ4 1352 aa12.33□□□□□ -0.44
CX3CR1-206ENST00000542107 NUTM1Q86Y26 1132 aa12.33□□□□□ -0.44
CX3CR1-206ENST00000542107 TBX22Q9Y458 520 aa12.33□□□□□ -0.44
CX3CR1-206ENST00000542107 ARHGEF10O15013 1369 aa12.33□□□□□ -0.44
CX3CR1-206ENST00000542107 SKOR2Q2VWA4 1001 aaPredicted RBP12.32□□□□□ -0.44
CX3CR1-206ENST00000542107 TPRNQ4KMQ1 711 aa12.32□□□□□ -0.44
CX3CR1-206ENST00000542107 THEMISQ8N1K5 641 aaPredicted RBP12.32□□□□□ -0.44
CX3CR1-206ENST00000542107 MON2Q7Z3U7 1717 aa12.32□□□□□ -0.44
CX3CR1-206ENST00000542107 IGSF1Q8N6C5 1336 aa12.32□□□□□ -0.44
CX3CR1-206ENST00000542107 GNAI3P08754 354 aa12.32□□□□□ -0.44
CX3CR1-206ENST00000542107 TAF7Q15545 349 aaPredicted RBP12.32□□□□□ -0.44
CX3CR1-206ENST00000542107 ITSN1Q15811 1721 aa12.32□□□□□ -0.44
CX3CR1-206ENST00000542107 UBTFL1P0CB47 393 aaPredicted RBP12.31□□□□□ -0.44
CX3CR1-206ENST00000542107 MX1P20591 662 aa12.31□□□□□ -0.44
CX3CR1-206ENST00000542107 XPCQ01831 940 aaPredicted RBP12.31□□□□□ -0.44
CX3CR1-206ENST00000542107 CAVIN1Q6NZI2 390 aaKnown RBP12.31□□□□□ -0.44
CX3CR1-206ENST00000542107 TRIM44Q96DX7 344 aaPredicted RBP12.31□□□□□ -0.44
CX3CR1-206ENST00000542107 PRPF40AO75400 957 aaKnown RBP12.31□□□□□ -0.44
CX3CR1-206ENST00000542107 SURF6O75683 361 aaKnown RBP12.31□□□□□ -0.44
CX3CR1-206ENST00000542107 LGR6Q9HBX8 967 aa12.31□□□□□ -0.44
CX3CR1-206ENST00000542107 ATP8B2P98198 1209 aa12.3□□□□□ -0.44
CX3CR1-206ENST00000542107 UNC5CLQ8IV45 518 aa12.3□□□□□ -0.44
CX3CR1-206ENST00000542107 CEP170BQ9Y4F5 1589 aaPredicted RBP12.3□□□□□ -0.44
CX3CR1-206ENST00000542107 PEAK1Q9H792 1746 aa12.3□□□□□ -0.44
CX3CR1-206ENST00000542107 NUCB2P80303 420 aa12.3□□□□□ -0.44
CX3CR1-206ENST00000542107 RIMS1Q86UR5 1692 aaKnown RBP12.3□□□□□ -0.44
CX3CR1-206ENST00000542107 UPF3BQ9BZI7 483 aaKnown RBP12.3□□□□□ -0.44
CX3CR1-206ENST00000542107 KCNQ3O43525 872 aa12.3□□□□□ -0.44
CX3CR1-206ENST00000542107 PALD1Q9ULE6 856 aa12.3□□□□□ -0.44
CX3CR1-206ENST00000542107 USP44Q9H0E7 712 aa12.29□□□□□ -0.44
CX3CR1-206ENST00000542107 LRRC59Q96AG4 307 aaKnown RBP12.29□□□□□ -0.44
CX3CR1-206ENST00000542107 AKAP12Q02952 1782 aa12.29□□□□□ -0.44
CX3CR1-206ENST00000542107 ESCO1Q5FWF5 840 aa12.28□□□□□ -0.44
CX3CR1-206ENST00000542107 NAP1L5Q96NT1 182 aaPredicted RBP12.28□□□□□ -0.44
CX3CR1-206ENST00000542107 ESYT1Q9BSJ8 1104 aa12.28□□□□□ -0.44
CX3CR1-206ENST00000542107 SSH2Q76I76 1423 aa12.28□□□□□ -0.44
CX3CR1-206ENST00000542107 PSME1Q06323 249 aa12.28□□□□□ -0.44
CX3CR1-206ENST00000542107 MPRIPQ6WCQ1 1025 aa12.28□□□□□ -0.44
CX3CR1-206ENST00000542107 PPP1R42Q7Z4L9 355 aa12.28□□□□□ -0.44
CX3CR1-206ENST00000542107 RBM27Q9P2N5 1060 aaKnown RBP12.28□□□□□ -0.44
CX3CR1-206ENST00000542107 AK9Q5TCS8 1911 aa12.28□□□□□ -0.44
CX3CR1-206ENST00000542107 NBPF6Q5VWK0 638 aa12.28□□□□□ -0.44
CX3CR1-206ENST00000542107 NBPF4Q96M43 638 aa12.28□□□□□ -0.44
CX3CR1-206ENST00000542107 KDRP35968 1356 aa12.27□□□□□ -0.44
CX3CR1-206ENST00000542107 SRGAP3O43295 1099 aa12.27□□□□□ -0.44
CX3CR1-206ENST00000542107 OS9Q13438 667 aaPredicted RBP12.27□□□□□ -0.44
CX3CR1-206ENST00000542107 TMX3Q96JJ7 454 aa12.27□□□□□ -0.44
CX3CR1-206ENST00000542107 LARP6Q9BRS8 491 aaKnown RBP12.27□□□□□ -0.44
CX3CR1-206ENST00000542107 PHF8Q9UPP1 1060 aa12.27□□□□□ -0.44
CX3CR1-206ENST00000542107 DTNBO60941 627 aa12.27□□□□□ -0.45
CX3CR1-206ENST00000542107 SRCIN1Q9C0H9 1055 aa12.27□□□□□ -0.45
CX3CR1-206ENST00000542107 CHPF2Q9P2E5 772 aa12.27□□□□□ -0.45
CX3CR1-206ENST00000542107 MAP3K5Q99683 1374 aa12.27□□□□□ -0.45
CX3CR1-206ENST00000542107 UBR1Q8IWV7 1749 aa12.26□□□□□ -0.45
CX3CR1-206ENST00000542107 PI4KAP2A4QPH2 592 aa12.26□□□□□ -0.45
CX3CR1-206ENST00000542107 NBPF7P0C2Y1 421 aaPredicted RBP12.26□□□□□ -0.45
CX3CR1-206ENST00000542107 PTMSP20962 102 aa12.26□□□□□ -0.45
CX3CR1-206ENST00000542107 MCCP23508 829 aa12.26□□□□□ -0.45
CX3CR1-206ENST00000542107 CHMLP26374 656 aa12.26□□□□□ -0.45
CX3CR1-206ENST00000542107 TEFQ10587 303 aa12.26□□□□□ -0.45
CX3CR1-206ENST00000542107 PI4KAP1Q8N8J0 262 aa12.26□□□□□ -0.45
CX3CR1-206ENST00000542107 OSBPL3Q9H4L5 887 aa12.26□□□□□ -0.45
CX3CR1-206ENST00000542107 KLHL40Q2TBA0 621 aa12.26□□□□□ -0.45
CX3CR1-206ENST00000542107 HTATSF1O43719 755 aaKnown RBP12.26□□□□□ -0.45
CX3CR1-206ENST00000542107 TRHP20396 242 aaPredicted RBP12.26□□□□□ -0.45
CX3CR1-206ENST00000542107 NASPP49321 788 aaPredicted RBP12.26□□□□□ -0.45
CX3CR1-206ENST00000542107 IL25Q9H293 177 aa12.26□□□□□ -0.45
CX3CR1-206ENST00000542107 ZDHHC9Q9Y397 364 aa12.26□□□□□ -0.45
CX3CR1-206ENST00000542107 LMBRD1Q9NUN5 540 aa12.25□□□□□ -0.45
CX3CR1-206ENST00000542107 NRKQ7Z2Y5 1582 aa12.25□□□□□ -0.45
CX3CR1-206ENST00000542107 ANP32BQ92688 251 aaKnown RBP12.25□□□□□ -0.45
CX3CR1-206ENST00000542107 CWC22Q9HCG8 908 aaKnown RBP12.25□□□□□ -0.45
CX3CR1-206ENST00000542107 ZNF530Q6P9A1 599 aaPredicted RBP12.24□□□□□ -0.45
CX3CR1-206ENST00000542107 SETD1BQ9UPS6 1966 aaKnown RBP12.24□□□□□ -0.45
CX3CR1-206ENST00000542107 ESPNB1AK53 854 aa12.24□□□□□ -0.45
CX3CR1-206ENST00000542107 BTBD11A6QL63 1104 aa12.24□□□□□ -0.45
CX3CR1-206ENST00000542107 ERBB4Q15303 1308 aa12.23□□□□□ -0.45
CX3CR1-206ENST00000542107 IBTKQ9P2D0 1353 aaPredicted RBP12.23□□□□□ -0.45
CX3CR1-206ENST00000542107 RHPN1Q8TCX5 695 aa12.23□□□□□ -0.45
CX3CR1-206ENST00000542107 GDPD2Q9HCC8 539 aa12.23□□□□□ -0.45
CX3CR1-206ENST00000542107 ZSCAN23Q3MJ62 389 aa12.23□□□□□ -0.45
CX3CR1-206ENST00000542107 NSFL1CQ9UNZ2 370 aaKnown RBP12.23□□□□□ -0.45
CX3CR1-206ENST00000542107 CYP2E1P05181 493 aaPredicted RBP12.22□□□□□ -0.45
CX3CR1-206ENST00000542107 EIF4A1P60842 406 aaKnown RBP12.22□□□□□ -0.45
CX3CR1-206ENST00000542107 AIMP1Q12904 312 aaKnown RBP12.22□□□□□ -0.45
CX3CR1-206ENST00000542107 DNAAF4Q8WXU2 420 aa12.22□□□□□ -0.45
CX3CR1-206ENST00000542107 ISY1Q9ULR0 285 aaKnown RBP12.22□□□□□ -0.45
CX3CR1-206ENST00000542107 CWC27Q6UX04 472 aaKnown RBP12.22□□□□□ -0.45
CX3CR1-206ENST00000542107 SOS1Q07889 1333 aaPredicted RBP12.22□□□□□ -0.45
CX3CR1-206ENST00000542107 SALL3Q9BXA9 1300 aa12.22□□□□□ -0.45
CX3CR1-206ENST00000542107 PRAMEF22A3QJZ6 481 aa12.22□□□□□ -0.45
CX3CR1-206ENST00000542107 GPT2Q8TD30 523 aa12.22□□□□□ -0.45
CX3CR1-206ENST00000542107 DDX54Q8TDD1 881 aaKnown RBP12.22□□□□□ -0.45
CX3CR1-206ENST00000542107 IP6K1Q92551 441 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms