RNA–Protein interactions for RNA: ENST00000542068.5

CNOT9-208, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CNOT9, Length 3,259 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-208ENST00000542068 KCNA6P17658 529 aa18.68■□□□□ 0.58
CNOT9-208ENST00000542068 RPAP2Q8IXW5 612 aaPredicted RBP18.68■□□□□ 0.58
CNOT9-208ENST00000542068 TMX3Q96JJ7 454 aa18.68■□□□□ 0.58
CNOT9-208ENST00000542068 CHL1O00533 1208 aa18.68■□□□□ 0.58
CNOT9-208ENST00000542068 IL1RAPL2Q9NP60 686 aa18.68■□□□□ 0.58
CNOT9-208ENST00000542068 PALD1Q9ULE6 856 aa18.68■□□□□ 0.58
CNOT9-208ENST00000542068 PLCB2Q00722 1185 aa18.67■□□□□ 0.58
CNOT9-208ENST00000542068 PIK3R4Q99570 1358 aa18.67■□□□□ 0.58
CNOT9-208ENST00000542068 TPM2P07951 284 aa18.66■□□□□ 0.58
CNOT9-208ENST00000542068 ZNF445P59923 1031 aa18.66■□□□□ 0.58
CNOT9-208ENST00000542068 CPSF1Q10570 1443 aaKnown RBP18.66■□□□□ 0.58
CNOT9-208ENST00000542068 HMMRO75330 724 aa18.66■□□□□ 0.58
CNOT9-208ENST00000542068 PDE1AP54750 535 aa18.66■□□□□ 0.58
CNOT9-208ENST00000542068 ESCO1Q5FWF5 840 aa18.65■□□□□ 0.58
CNOT9-208ENST00000542068 RTL1A6NKG5 1358 aa18.65■□□□□ 0.58
CNOT9-208ENST00000542068 OFD1O75665 1012 aa18.65■□□□□ 0.58
CNOT9-208ENST00000542068 CYP2E1P05181 493 aaPredicted RBP18.65■□□□□ 0.58
CNOT9-208ENST00000542068 CWC22Q9HCG8 908 aaKnown RBP18.65■□□□□ 0.58
CNOT9-208ENST00000542068 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.64■□□□□ 0.57
CNOT9-208ENST00000542068 PSME1Q06323 249 aa18.64■□□□□ 0.57
CNOT9-208ENST00000542068 DNTTIP2Q5QJE6 756 aaKnown RBP18.64■□□□□ 0.57
CNOT9-208ENST00000542068 ZNF830Q96NB3 372 aaPredicted RBP18.64■□□□□ 0.57
CNOT9-208ENST00000542068 OS9Q13438 667 aaPredicted RBP18.63■□□□□ 0.57
CNOT9-208ENST00000542068 FLIIQ13045 1269 aa18.62■□□□□ 0.57
CNOT9-208ENST00000542068 HDGFL1Q5TGJ6 251 aa18.62■□□□□ 0.57
CNOT9-208ENST00000542068 UQCRHLA0A096LP55 91 aa18.62■□□□□ 0.57
CNOT9-208ENST00000542068 GADD45BO75293 160 aaPredicted RBP18.62■□□□□ 0.57
CNOT9-208ENST00000542068 UQCRHP07919 91 aa18.62■□□□□ 0.57
CNOT9-208ENST00000542068 CLEC17AQ6ZS10 378 aa18.62■□□□□ 0.57
CNOT9-208ENST00000542068 THEMISQ8N1K5 641 aaPredicted RBP18.62■□□□□ 0.57
CNOT9-208ENST00000542068 AATKQ6ZMQ8 1374 aa18.61■□□□□ 0.57
CNOT9-208ENST00000542068 GNAT3A8MTJ3 354 aa18.61■□□□□ 0.57
CNOT9-208ENST00000542068 GNAI2P04899 355 aa18.61■□□□□ 0.57
CNOT9-208ENST00000542068 NUTM1Q86Y26 1132 aa18.61■□□□□ 0.57
CNOT9-208ENST00000542068 ATP10DQ9P241 1426 aa18.61■□□□□ 0.57
CNOT9-208ENST00000542068 PNMA6EA0A0J9YXQ4 647 aa18.61■□□□□ 0.57
CNOT9-208ENST00000542068 LRSAM1Q6UWE0 723 aa18.61■□□□□ 0.57
CNOT9-208ENST00000542068 UNC5CLQ8IV45 518 aa18.61■□□□□ 0.57
CNOT9-208ENST00000542068 LRRFIP2Q9Y608 721 aaKnown RBP18.61■□□□□ 0.57
CNOT9-208ENST00000542068 PLEKHG3A1L390 1219 aa18.6■□□□□ 0.57
CNOT9-208ENST00000542068 PHAXQ9H814 394 aaKnown RBP18.6■□□□□ 0.57
CNOT9-208ENST00000542068 LRRC59Q96AG4 307 aaKnown RBP18.6■□□□□ 0.57
CNOT9-208ENST00000542068 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.6■□□□□ 0.57
CNOT9-208ENST00000542068 CDK12Q9NYV4 1490 aaPredicted RBP18.6■□□□□ 0.57
CNOT9-208ENST00000542068 SETD1BQ9UPS6 1966 aaKnown RBP18.6■□□□□ 0.57
CNOT9-208ENST00000542068 JARID2Q92833 1246 aaPredicted RBP18.59■□□□□ 0.57
CNOT9-208ENST00000542068 CCDC30Q5VVM6 783 aa18.59■□□□□ 0.57
CNOT9-208ENST00000542068 MCCP23508 829 aa18.59■□□□□ 0.57
CNOT9-208ENST00000542068 ESYT1Q9BSJ8 1104 aa18.59■□□□□ 0.57
CNOT9-208ENST00000542068 MPRIPQ6WCQ1 1025 aa18.58■□□□□ 0.57
CNOT9-208ENST00000542068 DDX54Q8TDD1 881 aaKnown RBP18.58■□□□□ 0.57
CNOT9-208ENST00000542068 NOL7Q9UMY1 257 aaKnown RBP18.58■□□□□ 0.57
CNOT9-208ENST00000542068 SURF6O75683 361 aaKnown RBP18.58■□□□□ 0.56
CNOT9-208ENST00000542068 TEFQ10587 303 aa18.58■□□□□ 0.56
CNOT9-208ENST00000542068 LRRCC1Q9C099 1032 aa18.58■□□□□ 0.56
CNOT9-208ENST00000542068 RIMBP3CA6NJZ7 1639 aa18.58■□□□□ 0.56
CNOT9-208ENST00000542068 RIMBP3BA6NNM3 1639 aa18.58■□□□□ 0.56
CNOT9-208ENST00000542068 RIMBP3Q9UFD9 1639 aa18.58■□□□□ 0.56
CNOT9-208ENST00000542068 MX1P20591 662 aa18.57■□□□□ 0.56
CNOT9-208ENST00000542068 C17orf53Q8N3J3 647 aaPredicted RBP18.57■□□□□ 0.56
CNOT9-208ENST00000542068 TSC1Q92574 1164 aa18.57■□□□□ 0.56
CNOT9-208ENST00000542068 UBTFL1P0CB47 393 aaPredicted RBP18.57■□□□□ 0.56
CNOT9-208ENST00000542068 USP6P35125 1406 aa18.57■□□□□ 0.56
CNOT9-208ENST00000542068 DIP2BQ9P265 1576 aa18.57■□□□□ 0.56
CNOT9-208ENST00000542068 KNDC1Q76NI1 1749 aa18.57■□□□□ 0.56
CNOT9-208ENST00000542068 AIMP1Q12904 312 aaKnown RBP18.56■□□□□ 0.56
CNOT9-208ENST00000542068 ZKSCAN5Q9Y2L8 839 aa18.56■□□□□ 0.56
CNOT9-208ENST00000542068 HOXC9P31274 260 aa18.56■□□□□ 0.56
CNOT9-208ENST00000542068 CCT4P50991 539 aaKnown RBP18.56■□□□□ 0.56
CNOT9-208ENST00000542068 IL17REQ8NFR9 667 aa18.56■□□□□ 0.56
CNOT9-208ENST00000542068 TSPY26PQ9H489 355 aa18.56■□□□□ 0.56
CNOT9-208ENST00000542068 FAM177BA6PVY3 158 aa18.55■□□□□ 0.56
CNOT9-208ENST00000542068 IL25Q9H293 177 aa18.55■□□□□ 0.56
CNOT9-208ENST00000542068 PDCL3Q9H2J4 239 aa18.55■□□□□ 0.56
CNOT9-208ENST00000542068 FLT4P35916 1363 aa18.55■□□□□ 0.56
CNOT9-208ENST00000542068 PTPRCP08575 1304 aa18.55■□□□□ 0.56
CNOT9-208ENST00000542068 CPA1P15085 419 aa18.55■□□□□ 0.56
CNOT9-208ENST00000542068 LGR6Q9HBX8 967 aa18.55■□□□□ 0.56
CNOT9-208ENST00000542068 CHMP3Q9Y3E7 222 aa18.55■□□□□ 0.56
CNOT9-208ENST00000542068 IBTKQ9P2D0 1353 aaPredicted RBP18.54■□□□□ 0.56
CNOT9-208ENST00000542068 USP48Q86UV5 1035 aa18.54■□□□□ 0.56
CNOT9-208ENST00000542068 USP25Q9UHP3 1055 aa18.54■□□□□ 0.56
CNOT9-208ENST00000542068 KCNQ3O43525 872 aa18.54■□□□□ 0.56
CNOT9-208ENST00000542068 CHMLP26374 656 aa18.54■□□□□ 0.56
CNOT9-208ENST00000542068 RGS12O14924 1447 aa18.53■□□□□ 0.56
CNOT9-208ENST00000542068 KIF20BQ96Q89 1820 aa18.53■□□□□ 0.56
CNOT9-208ENST00000542068 TAF7Q15545 349 aaPredicted RBP18.53■□□□□ 0.56
CNOT9-208ENST00000542068 PHF8Q9UPP1 1060 aa18.53■□□□□ 0.56
CNOT9-208ENST00000542068 CCDC39Q9UFE4 941 aa18.53■□□□□ 0.56
CNOT9-208ENST00000542068 ADAMTS13Q76LX8 1427 aa18.52■□□□□ 0.56
CNOT9-208ENST00000542068 FIBPO43427 364 aa18.52■□□□□ 0.56
CNOT9-208ENST00000542068 BRD1O95696 1058 aa18.52■□□□□ 0.56
CNOT9-208ENST00000542068 MBD3O95983 291 aa18.52■□□□□ 0.56
CNOT9-208ENST00000542068 ZNF530Q6P9A1 599 aaPredicted RBP18.52■□□□□ 0.56
CNOT9-208ENST00000542068 PDLIM2Q96JY6 352 aa18.52■□□□□ 0.56
CNOT9-208ENST00000542068 SRGAP3O43295 1099 aa18.52■□□□□ 0.55
CNOT9-208ENST00000542068 CNPY2Q9Y2B0 182 aa18.52■□□□□ 0.55
CNOT9-208ENST00000542068 GNAI3P08754 354 aa18.51■□□□□ 0.55
CNOT9-208ENST00000542068 ZC3H6P61129 1189 aaKnown RBP18.51■□□□□ 0.55
CNOT9-208ENST00000542068 SIRT1Q96EB6 747 aa18.51■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms