RNA–Protein interactions for RNA: ENST00000541461.5

PHACTR3-209, Transcript of phosphatase and actin regulator 3, humanhuman

TSL 2 BASIC

Gene PHACTR3, Length 2,349 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR3-209ENST00000541461 PPP1R9BQ96SB3 815 aa12.97□□□□□ -0.33
PHACTR3-209ENST00000541461 SSH2Q76I76 1423 aa12.97□□□□□ -0.33
PHACTR3-209ENST00000541461 TOM1O60784 492 aa12.97□□□□□ -0.33
PHACTR3-209ENST00000541461 HSP90AA2PQ14568 343 aaPredicted RBP12.97□□□□□ -0.33
PHACTR3-209ENST00000541461 KRT28Q7Z3Y7 464 aa12.97□□□□□ -0.33
PHACTR3-209ENST00000541461 ABTB2Q8N961 1025 aa12.97□□□□□ -0.33
PHACTR3-209ENST00000541461 SDSP20132 328 aa12.96□□□□□ -0.33
PHACTR3-209ENST00000541461 LMOD3Q0VAK6 560 aa12.96□□□□□ -0.33
PHACTR3-209ENST00000541461 INTS3Q68E01 1043 aaKnown RBP12.96□□□□□ -0.33
PHACTR3-209ENST00000541461 ANKRD44Q8N8A2 993 aa12.96□□□□□ -0.33
PHACTR3-209ENST00000541461 UBAP1LF5GYI3 381 aa12.96□□□□□ -0.34
PHACTR3-209ENST00000541461 NLRP6P59044 892 aa12.96□□□□□ -0.34
PHACTR3-209ENST00000541461 CAVIN1Q6NZI2 390 aaKnown RBP12.96□□□□□ -0.34
PHACTR3-209ENST00000541461 COG3Q96JB2 828 aa12.96□□□□□ -0.34
PHACTR3-209ENST00000541461 LMBRD1Q9NUN5 540 aa12.96□□□□□ -0.34
PHACTR3-209ENST00000541461 NPHP3Q7Z494 1330 aa12.95□□□□□ -0.34
PHACTR3-209ENST00000541461 CYP2E1P05181 493 aaPredicted RBP12.95□□□□□ -0.34
PHACTR3-209ENST00000541461 PIP4K2BP78356 416 aa12.95□□□□□ -0.34
PHACTR3-209ENST00000541461 NUCB2P80303 420 aa12.95□□□□□ -0.34
PHACTR3-209ENST00000541461 ZGPATQ8N5A5 531 aaKnown RBP12.95□□□□□ -0.34
PHACTR3-209ENST00000541461 CEP85Q6P2H3 762 aa12.95□□□□□ -0.34
PHACTR3-209ENST00000541461 KIF24Q5T7B8 1368 aa12.95□□□□□ -0.34
PHACTR3-209ENST00000541461 IBTKQ9P2D0 1353 aaPredicted RBP12.95□□□□□ -0.34
PHACTR3-209ENST00000541461 PIK3C2AO00443 1686 aa12.94□□□□□ -0.34
PHACTR3-209ENST00000541461 ATP10DQ9P241 1426 aa12.94□□□□□ -0.34
PHACTR3-209ENST00000541461 ZSCAN23Q3MJ62 389 aa12.94□□□□□ -0.34
PHACTR3-209ENST00000541461 ANP32BQ92688 251 aaKnown RBP12.94□□□□□ -0.34
PHACTR3-209ENST00000541461 CDK12Q9NYV4 1490 aaPredicted RBP12.94□□□□□ -0.34
PHACTR3-209ENST00000541461 TTC21AQ8NDW8 1320 aa12.94□□□□□ -0.34
PHACTR3-209ENST00000541461 RRP9O43818 475 aaKnown RBP12.94□□□□□ -0.34
PHACTR3-209ENST00000541461 KIF1AQ12756 1690 aa12.94□□□□□ -0.34
PHACTR3-209ENST00000541461 ZNF445P59923 1031 aa12.93□□□□□ -0.34
PHACTR3-209ENST00000541461 ZSCAN30Q86W11 494 aa12.93□□□□□ -0.34
PHACTR3-209ENST00000541461 AEBP1Q8IUX7 1158 aa12.93□□□□□ -0.34
PHACTR3-209ENST00000541461 RPAP2Q8IXW5 612 aaPredicted RBP12.93□□□□□ -0.34
PHACTR3-209ENST00000541461 CHAMP1Q96JM3 812 aa12.93□□□□□ -0.34
PHACTR3-209ENST00000541461 RGS12O14924 1447 aa12.93□□□□□ -0.34
PHACTR3-209ENST00000541461 PRPF40AO75400 957 aaKnown RBP12.93□□□□□ -0.34
PHACTR3-209ENST00000541461 MEIS3Q99687 375 aa12.93□□□□□ -0.34
PHACTR3-209ENST00000541461 RBSNQ9H1K0 784 aa12.93□□□□□ -0.34
PHACTR3-209ENST00000541461 ZDHHC9Q9Y397 364 aa12.93□□□□□ -0.34
PHACTR3-209ENST00000541461 MCM10Q7L590 875 aa12.92□□□□□ -0.34
PHACTR3-209ENST00000541461 RBM27Q9P2N5 1060 aaKnown RBP12.92□□□□□ -0.34
PHACTR3-209ENST00000541461 RTL1A6NKG5 1358 aa12.92□□□□□ -0.34
PHACTR3-209ENST00000541461 AATKQ6ZMQ8 1374 aa12.92□□□□□ -0.34
PHACTR3-209ENST00000541461 ST18O60284 1047 aa12.91□□□□□ -0.34
PHACTR3-209ENST00000541461 CASC1Q6TDU7 716 aa12.91□□□□□ -0.34
PHACTR3-209ENST00000541461 GPT2Q8TD30 523 aa12.91□□□□□ -0.34
PHACTR3-209ENST00000541461 CWC22Q9HCG8 908 aaKnown RBP12.91□□□□□ -0.34
PHACTR3-209ENST00000541461 OVOS2A0A0J9YW53 1432 aa12.91□□□□□ -0.34
PHACTR3-209ENST00000541461 OVOS2Q6IE36 1432 aa12.91□□□□□ -0.34
PHACTR3-209ENST00000541461 PRIM1P49642 420 aaKnown RBP12.91□□□□□ -0.34
PHACTR3-209ENST00000541461 KIAA1211Q6ZU35 1233 aa12.91□□□□□ -0.34
PHACTR3-209ENST00000541461 ZBTB7CA1YPR0 619 aa12.9□□□□□ -0.34
PHACTR3-209ENST00000541461 FOXD4L5Q5VV16 416 aaPredicted RBP12.9□□□□□ -0.34
PHACTR3-209ENST00000541461 SULT6B1Q6IMI4 303 aa12.9□□□□□ -0.34
PHACTR3-209ENST00000541461 CABLES1Q8TDN4 633 aa12.9□□□□□ -0.34
PHACTR3-209ENST00000541461 FOXD4L4Q8WXT5 416 aaPredicted RBP12.9□□□□□ -0.34
PHACTR3-209ENST00000541461 SOS2Q07890 1332 aaPredicted RBP12.9□□□□□ -0.34
PHACTR3-209ENST00000541461 TRPM3Q9HCF6 1732 aaPredicted RBP12.9□□□□□ -0.34
PHACTR3-209ENST00000541461 ROBO1Q9Y6N7 1651 aa12.9□□□□□ -0.34
PHACTR3-209ENST00000541461 PXDNQ92626 1479 aa12.9□□□□□ -0.34
PHACTR3-209ENST00000541461 CHL1O00533 1208 aa12.9□□□□□ -0.34
PHACTR3-209ENST00000541461 GLIPR1L2Q4G1C9 344 aa12.9□□□□□ -0.34
PHACTR3-209ENST00000541461 TPRNQ4KMQ1 711 aa12.9□□□□□ -0.34
PHACTR3-209ENST00000541461 MARF1Q9Y4F3 1742 aaKnown RBP12.9□□□□□ -0.34
PHACTR3-209ENST00000541461 TPM2P07951 284 aa12.89□□□□□ -0.35
PHACTR3-209ENST00000541461 MSNP26038 577 aaKnown RBP12.89□□□□□ -0.35
PHACTR3-209ENST00000541461 REC8O95072 547 aa12.89□□□□□ -0.35
PHACTR3-209ENST00000541461 EIF4A2Q14240 407 aaKnown RBP12.89□□□□□ -0.35
PHACTR3-209ENST00000541461 ERC2O15083 957 aa12.88□□□□□ -0.35
PHACTR3-209ENST00000541461 OFD1O75665 1012 aa12.88□□□□□ -0.35
PHACTR3-209ENST00000541461 SLC4A2P04920 1241 aa12.88□□□□□ -0.35
PHACTR3-209ENST00000541461 MIS18AQ9NYP9 233 aa12.88□□□□□ -0.35
PHACTR3-209ENST00000541461 NSFL1CQ9UNZ2 370 aaKnown RBP12.88□□□□□ -0.35
PHACTR3-209ENST00000541461 SBNO1A3KN83 1393 aa12.88□□□□□ -0.35
PHACTR3-209ENST00000541461 SPATA31A3Q5VYP0 1347 aa12.88□□□□□ -0.35
PHACTR3-209ENST00000541461 USP31Q70CQ4 1352 aa12.88□□□□□ -0.35
PHACTR3-209ENST00000541461 PDIA4P13667 645 aaKnown RBP12.87□□□□□ -0.35
PHACTR3-209ENST00000541461 TSHZ3Q63HK5 1081 aa12.87□□□□□ -0.35
PHACTR3-209ENST00000541461 SLC4A10Q6U841 1118 aa12.87□□□□□ -0.35
PHACTR3-209ENST00000541461 VSIG10Q8N0Z9 540 aa12.87□□□□□ -0.35
PHACTR3-209ENST00000541461 TMEM63CQ9P1W3 806 aa12.87□□□□□ -0.35
PHACTR3-209ENST00000541461 F6X3S4 739 aa12.87□□□□□ -0.35
PHACTR3-209ENST00000541461 PTPRCP08575 1304 aa12.87□□□□□ -0.35
PHACTR3-209ENST00000541461 NEK4P51957 841 aa12.87□□□□□ -0.35
PHACTR3-209ENST00000541461 G2E3Q7L622 706 aa12.87□□□□□ -0.35
PHACTR3-209ENST00000541461 TNS3Q68CZ2 1445 aa12.86□□□□□ -0.35
PHACTR3-209ENST00000541461 MAP3K19Q56UN5 1328 aa12.86□□□□□ -0.35
PHACTR3-209ENST00000541461 PDE1AP54750 535 aa12.86□□□□□ -0.35
PHACTR3-209ENST00000541461 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.86□□□□□ -0.35
PHACTR3-209ENST00000541461 SYCE3A1L190 88 aa12.85□□□□□ -0.35
PHACTR3-209ENST00000541461 HAP1P54257 671 aaPredicted RBP12.85□□□□□ -0.35
PHACTR3-209ENST00000541461 HSP90AB2PQ58FF8 381 aa12.85□□□□□ -0.35
PHACTR3-209ENST00000541461 TMX3Q96JJ7 454 aa12.85□□□□□ -0.35
PHACTR3-209ENST00000541461 PDLIM2Q96JY6 352 aa12.85□□□□□ -0.35
PHACTR3-209ENST00000541461 ALS2Q96Q42 1657 aa12.85□□□□□ -0.35
PHACTR3-209ENST00000541461 KIAA0232Q92628 1395 aa12.85□□□□□ -0.35
PHACTR3-209ENST00000541461 ZC3H6P61129 1189 aaKnown RBP12.85□□□□□ -0.35
PHACTR3-209ENST00000541461 LRRC59Q96AG4 307 aaKnown RBP12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms