RNA–Protein interactions for RNA: ENST00000540256.1

PPFIBP1-211, Transcript of PPFIA binding protein 1, humanhuman

TSL 3

Gene PPFIBP1, Length 424 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIBP1-211ENST00000540256 CFAP65Q6ZU64 1925 aaKnown RBP8.72□□□□□ -1.01
PPFIBP1-211ENST00000540256 NEXMIFQ5QGS0 1516 aa8.72□□□□□ -1.01
PPFIBP1-211ENST00000540256 G3V3G9 751 aa8.72□□□□□ -1.01
PPFIBP1-211ENST00000540256 TNNT2P45379 298 aaPredicted RBP8.72□□□□□ -1.01
PPFIBP1-211ENST00000540256 INTS3Q68E01 1043 aaKnown RBP8.72□□□□□ -1.01
PPFIBP1-211ENST00000540256 VSIG10Q8N0Z9 540 aa8.72□□□□□ -1.01
PPFIBP1-211ENST00000540256 GAS2L2Q8NHY3 880 aa8.72□□□□□ -1.01
PPFIBP1-211ENST00000540256 ESF1Q9H501 851 aaKnown RBP8.72□□□□□ -1.01
PPFIBP1-211ENST00000540256 ADAMTSL3P82987 1691 aa8.72□□□□□ -1.01
PPFIBP1-211ENST00000540256 ST18O60284 1047 aa8.71□□□□□ -1.02
PPFIBP1-211ENST00000540256 SSFA2P28290 1259 aa8.71□□□□□ -1.02
PPFIBP1-211ENST00000540256 TTC22Q5TAA0 569 aa8.71□□□□□ -1.02
PPFIBP1-211ENST00000540256 CASC1Q6TDU7 716 aa8.71□□□□□ -1.02
PPFIBP1-211ENST00000540256 HDGFL2Q7Z4V5 671 aaPredicted RBP8.71□□□□□ -1.02
PPFIBP1-211ENST00000540256 PLEKHM2Q8IWE5 1019 aa8.71□□□□□ -1.02
PPFIBP1-211ENST00000540256 CCDC39Q9UFE4 941 aa8.71□□□□□ -1.02
PPFIBP1-211ENST00000540256 ZKSCAN5Q9Y2L8 839 aa8.71□□□□□ -1.02
PPFIBP1-211ENST00000540256 SETD1BQ9UPS6 1966 aaKnown RBP8.71□□□□□ -1.02
PPFIBP1-211ENST00000540256 C3P01024 1663 aa8.71□□□□□ -1.02
PPFIBP1-211ENST00000540256 RIMS1Q86UR5 1692 aaKnown RBP8.71□□□□□ -1.02
PPFIBP1-211ENST00000540256 CD163L1Q9NR16 1453 aa8.7□□□□□ -1.02
PPFIBP1-211ENST00000540256 U2SURPO15042 1029 aaKnown RBP8.7□□□□□ -1.02
PPFIBP1-211ENST00000540256 REC8O95072 547 aa8.7□□□□□ -1.02
PPFIBP1-211ENST00000540256 UVSSAQ2YD98 709 aa8.7□□□□□ -1.02
PPFIBP1-211ENST00000540256 ZSCAN23Q3MJ62 389 aa8.7□□□□□ -1.02
PPFIBP1-211ENST00000540256 LRSAM1Q6UWE0 723 aa8.7□□□□□ -1.02
PPFIBP1-211ENST00000540256 SIRT2Q8IXJ6 389 aa8.7□□□□□ -1.02
PPFIBP1-211ENST00000540256 ANKRD44Q8N8A2 993 aa8.7□□□□□ -1.02
PPFIBP1-211ENST00000540256 INTS4Q96HW7 963 aaKnown RBP8.7□□□□□ -1.02
PPFIBP1-211ENST00000540256 OSBPL3Q9H4L5 887 aa8.7□□□□□ -1.02
PPFIBP1-211ENST00000540256 AATKQ6ZMQ8 1374 aa8.7□□□□□ -1.02
PPFIBP1-211ENST00000540256 CD2BP2O95400 341 aaKnown RBP8.69□□□□□ -1.02
PPFIBP1-211ENST00000540256 ANAPC15P60006 121 aa8.69□□□□□ -1.02
PPFIBP1-211ENST00000540256 C3orf67Q6ZVT6 689 aa8.69□□□□□ -1.02
PPFIBP1-211ENST00000540256 FAM184AQ8NB25 1140 aa8.69□□□□□ -1.02
PPFIBP1-211ENST00000540256 TMEM121BQ9BXQ6 578 aaPredicted RBP8.69□□□□□ -1.02
PPFIBP1-211ENST00000540256 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.69□□□□□ -1.02
PPFIBP1-211ENST00000540256 PTPRMP28827 1452 aa8.69□□□□□ -1.02
PPFIBP1-211ENST00000540256 ATP7BP35670 1465 aa8.69□□□□□ -1.02
PPFIBP1-211ENST00000540256 SPATA31D1Q6ZQQ2 1576 aa8.69□□□□□ -1.02
PPFIBP1-211ENST00000540256 PPP1R37O75864 691 aa8.68□□□□□ -1.02
PPFIBP1-211ENST00000540256 CUL4AQ13619 759 aa8.68□□□□□ -1.02
PPFIBP1-211ENST00000540256 TMEM132EQ6IEE7 984 aa8.68□□□□□ -1.02
PPFIBP1-211ENST00000540256 SASS6Q6UVJ0 657 aa8.68□□□□□ -1.02
PPFIBP1-211ENST00000540256 MICALL2Q8IY33 904 aa8.68□□□□□ -1.02
PPFIBP1-211ENST00000540256 SYAP1Q96A49 352 aaPredicted RBP8.68□□□□□ -1.02
PPFIBP1-211ENST00000540256 KIAA0232Q92628 1395 aa8.68□□□□□ -1.02
PPFIBP1-211ENST00000540256 DLC1Q96QB1 1528 aa8.68□□□□□ -1.02
PPFIBP1-211ENST00000540256 PHF14O94880 888 aa8.67□□□□□ -1.02
PPFIBP1-211ENST00000540256 PTPRCP08575 1304 aa8.67□□□□□ -1.02
PPFIBP1-211ENST00000540256 GSPT1P15170 499 aaKnown RBP8.67□□□□□ -1.02
PPFIBP1-211ENST00000540256 ZNF142P52746 1687 aaPredicted RBP8.67□□□□□ -1.02
PPFIBP1-211ENST00000540256 GGT6Q6P531 493 aa8.67□□□□□ -1.02
PPFIBP1-211ENST00000540256 SMAP1Q8IYB5 467 aaPredicted RBP8.67□□□□□ -1.02
PPFIBP1-211ENST00000540256 SLAIN1Q8ND83 568 aa8.67□□□□□ -1.02
PPFIBP1-211ENST00000540256 BBXQ8WY36 941 aaPredicted RBP8.67□□□□□ -1.02
PPFIBP1-211ENST00000540256 LRRC7Q96NW7 1537 aa8.67□□□□□ -1.02
PPFIBP1-211ENST00000540256 RBSNQ9H1K0 784 aa8.67□□□□□ -1.02
PPFIBP1-211ENST00000540256 CDK12Q9NYV4 1490 aaPredicted RBP8.66□□□□□ -1.02
PPFIBP1-211ENST00000540256 YTHDC2Q9H6S0 1430 aaKnown RBP8.66□□□□□ -1.02
PPFIBP1-211ENST00000540256 ERC2O15083 957 aa8.66□□□□□ -1.02
PPFIBP1-211ENST00000540256 GTPBP6O43824 516 aaPredicted RBP8.66□□□□□ -1.02
PPFIBP1-211ENST00000540256 LETM1O95202 739 aaPredicted RBP8.66□□□□□ -1.02
PPFIBP1-211ENST00000540256 HMGN5P82970 282 aaKnown RBP8.66□□□□□ -1.02
PPFIBP1-211ENST00000540256 MCTP1Q6DN14 999 aa8.66□□□□□ -1.02
PPFIBP1-211ENST00000540256 PRIMPOLQ96LW4 560 aa8.66□□□□□ -1.02
PPFIBP1-211ENST00000540256 GGNBP2Q9H3C7 697 aa8.66□□□□□ -1.02
PPFIBP1-211ENST00000540256 POLKQ9UBT6 870 aa8.66□□□□□ -1.02
PPFIBP1-211ENST00000540256 SSH2Q76I76 1423 aa8.65□□□□□ -1.02
PPFIBP1-211ENST00000540256 HMMRO75330 724 aa8.65□□□□□ -1.02
PPFIBP1-211ENST00000540256 BRD1O95696 1058 aa8.65□□□□□ -1.02
PPFIBP1-211ENST00000540256 PRKAR2BP31323 418 aa8.65□□□□□ -1.02
PPFIBP1-211ENST00000540256 IL13P35225 146 aa8.65□□□□□ -1.02
PPFIBP1-211ENST00000540256 GTF2F1P35269 517 aaKnown RBP eCLIP8.65□□□□□ -1.02
PPFIBP1-211ENST00000540256 TWISTNBQ3B726 338 aaPredicted RBP8.65□□□□□ -1.02
PPFIBP1-211ENST00000540256 CAVIN1Q6NZI2 390 aaKnown RBP8.65□□□□□ -1.02
PPFIBP1-211ENST00000540256 TMEM87AQ8NBN3 555 aa8.65□□□□□ -1.02
PPFIBP1-211ENST00000540256 SIRT1Q96EB6 747 aa8.65□□□□□ -1.02
PPFIBP1-211ENST00000540256 ARXQ96QS3 562 aa8.65□□□□□ -1.02
PPFIBP1-211ENST00000540256 RYDENQ9NUL5 291 aaKnown RBP8.65□□□□□ -1.02
PPFIBP1-211ENST00000540256 ZDHHC9Q9Y397 364 aa8.65□□□□□ -1.02
PPFIBP1-211ENST00000540256 KIF20BQ96Q89 1820 aa8.65□□□□□ -1.02
PPFIBP1-211ENST00000540256 ATP10DQ9P241 1426 aa8.64□□□□□ -1.03
PPFIBP1-211ENST00000540256 MYO5BQ9ULV0 1848 aa8.64□□□□□ -1.03
PPFIBP1-211ENST00000540256 TPM3P06753 285 aa8.64□□□□□ -1.03
PPFIBP1-211ENST00000540256 PDIA4P13667 645 aaKnown RBP8.64□□□□□ -1.03
PPFIBP1-211ENST00000540256 PRIM1P49642 420 aaKnown RBP8.64□□□□□ -1.03
PPFIBP1-211ENST00000540256 SRPK2P78362 688 aaKnown RBP8.64□□□□□ -1.03
PPFIBP1-211ENST00000540256 UTP14CQ5TAP6 766 aaKnown RBP8.64□□□□□ -1.03
PPFIBP1-211ENST00000540256 GPT2Q8TD30 523 aa8.64□□□□□ -1.03
PPFIBP1-211ENST00000540256 MBIPQ9NS73 344 aa8.64□□□□□ -1.03
PPFIBP1-211ENST00000540256 EDC4Q6P2E9 1401 aaKnown RBP8.63□□□□□ -1.03
PPFIBP1-211ENST00000540256 RTL1A6NKG5 1358 aa8.63□□□□□ -1.03
PPFIBP1-211ENST00000540256 AOX1Q06278 1338 aa8.63□□□□□ -1.03
PPFIBP1-211ENST00000540256 SOS1Q07889 1333 aaPredicted RBP8.63□□□□□ -1.03
PPFIBP1-211ENST00000540256 PRPF40AO75400 957 aaKnown RBP8.63□□□□□ -1.03
PPFIBP1-211ENST00000540256 SDSP20132 328 aa8.63□□□□□ -1.03
PPFIBP1-211ENST00000540256 MYRIPQ8NFW9 859 aa8.63□□□□□ -1.03
PPFIBP1-211ENST00000540256 CHL1O00533 1208 aa8.62□□□□□ -1.03
PPFIBP1-211ENST00000540256 MCCP23508 829 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms