RNA–Protein interactions for RNA: ENST00000538297.1

AC087235.1-201, humanhuman

TSL 1 (best) BASIC

Gene AC087235.1, Length 1,329 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC087235.1-201ENST00000538297 PLCD3Q8N3E9 789 aa14.69□□□□□ -0.06
AC087235.1-201ENST00000538297 PCDHB13Q9Y5F0 798 aa14.69□□□□□ -0.06
AC087235.1-201ENST00000538297 PARP4Q9UKK3 1724 aaKnown RBP14.69□□□□□ -0.06
AC087235.1-201ENST00000538297 THSD7AQ9UPZ6 1657 aa14.69□□□□□ -0.06
AC087235.1-201ENST00000538297 A0A0G2JS52 829 aa14.68□□□□□ -0.06
AC087235.1-201ENST00000538297 MYT1Q01538 1121 aa14.68□□□□□ -0.06
AC087235.1-201ENST00000538297 PLEKHO1Q53GL0 409 aaPredicted RBP14.68□□□□□ -0.06
AC087235.1-201ENST00000538297 OVOS2A0A0G2JMS6 1433 aa14.68□□□□□ -0.06
AC087235.1-201ENST00000538297 KRT27Q7Z3Y8 459 aa14.67□□□□□ -0.06
AC087235.1-201ENST00000538297 RGPD2P0DJD1 1756 aa14.67□□□□□ -0.06
AC087235.1-201ENST00000538297 USHBP1Q8N6Y0 703 aa14.66□□□□□ -0.06
AC087235.1-201ENST00000538297 MRS2Q9HD23 443 aa14.66□□□□□ -0.06
AC087235.1-201ENST00000538297 BCL9O00512 1426 aa14.66□□□□□ -0.06
AC087235.1-201ENST00000538297 PCDH11XQ9BZA7 1347 aa14.66□□□□□ -0.06
AC087235.1-201ENST00000538297 PCDH11YQ9BZA8 1340 aa14.66□□□□□ -0.06
AC087235.1-201ENST00000538297 HSP90AB1P08238 724 aaKnown RBP14.66□□□□□ -0.06
AC087235.1-201ENST00000538297 FAM196AQ6ZSG2 479 aa14.66□□□□□ -0.06
AC087235.1-201ENST00000538297 TNS2Q63HR2 1409 aa14.65□□□□□ -0.06
AC087235.1-201ENST00000538297 WNK3Q9BYP7 1800 aa14.65□□□□□ -0.06
AC087235.1-201ENST00000538297 PNISRQ8TF01 805 aaKnown RBP14.65□□□□□ -0.06
AC087235.1-201ENST00000538297 RSPH6AQ9H0K4 717 aa14.65□□□□□ -0.06
AC087235.1-201ENST00000538297 RGS12O14924 1447 aa14.65□□□□□ -0.06
AC087235.1-201ENST00000538297 HMOX1P09601 288 aa14.64□□□□□ -0.07
AC087235.1-201ENST00000538297 AEBP1Q8IUX7 1158 aa14.64□□□□□ -0.07
AC087235.1-201ENST00000538297 IFNL2Q8IZJ0 200 aa14.64□□□□□ -0.07
AC087235.1-201ENST00000538297 GAS2L2Q8NHY3 880 aa14.64□□□□□ -0.07
AC087235.1-201ENST00000538297 ZBTB47Q9UFB7 747 aaPredicted RBP14.64□□□□□ -0.07
AC087235.1-201ENST00000538297 MEGF6O75095 1541 aa14.63□□□□□ -0.07
AC087235.1-201ENST00000538297 NKX1-1Q15270 411 aaPredicted RBP14.63□□□□□ -0.07
AC087235.1-201ENST00000538297 HTATSF1O43719 755 aaKnown RBP14.62□□□□□ -0.07
AC087235.1-201ENST00000538297 PRKAR2BP31323 418 aa14.62□□□□□ -0.07
AC087235.1-201ENST00000538297 C1orf141Q5JVX7 400 aa14.62□□□□□ -0.07
AC087235.1-201ENST00000538297 CCDC125Q86Z20 511 aa14.62□□□□□ -0.07
AC087235.1-201ENST00000538297 CDAN1Q8IWY9 1227 aa14.62□□□□□ -0.07
AC087235.1-201ENST00000538297 ADAMTS8Q9UP79 889 aa14.62□□□□□ -0.07
AC087235.1-201ENST00000538297 LRRC37A3O60309 1634 aa14.61□□□□□ -0.07
AC087235.1-201ENST00000538297 PKD1L3Q7Z443 1732 aa14.61□□□□□ -0.07
AC087235.1-201ENST00000538297 AKAP4Q5JQC9 854 aa14.61□□□□□ -0.07
AC087235.1-201ENST00000538297 NGEFQ8N5V2 710 aa14.61□□□□□ -0.07
AC087235.1-201ENST00000538297 DDX54Q8TDD1 881 aaKnown RBP14.61□□□□□ -0.07
AC087235.1-201ENST00000538297 RUNDC1Q96C34 613 aa14.61□□□□□ -0.07
AC087235.1-201ENST00000538297 PLEKHF1Q96S99 279 aa14.61□□□□□ -0.07
AC087235.1-201ENST00000538297 MAPK8IP3Q9UPT6 1336 aa14.6□□□□□ -0.07
AC087235.1-201ENST00000538297 MARCH10Q8NA82 808 aaPredicted RBP14.6□□□□□ -0.07
AC087235.1-201ENST00000538297 SLAIN1Q8ND83 568 aa14.6□□□□□ -0.07
AC087235.1-201ENST00000538297 DCAF5Q96JK2 942 aa14.6□□□□□ -0.07
AC087235.1-201ENST00000538297 CYP27B1O15528 508 aa14.59□□□□□ -0.07
AC087235.1-201ENST00000538297 PHKG2P15735 406 aa14.59□□□□□ -0.07
AC087235.1-201ENST00000538297 ZNF530Q6P9A1 599 aaPredicted RBP14.59□□□□□ -0.07
AC087235.1-201ENST00000538297 BRWD3Q6RI45 1802 aa14.58□□□□□ -0.08
AC087235.1-201ENST00000538297 ERVV-2B6SEH9 535 aa14.58□□□□□ -0.08
AC087235.1-201ENST00000538297 HMGB2P26583 209 aaKnown RBP14.58□□□□□ -0.08
AC087235.1-201ENST00000538297 IFNL1Q8IU54 200 aa14.58□□□□□ -0.08
AC087235.1-201ENST00000538297 GNAT3A8MTJ3 354 aa14.57□□□□□ -0.08
AC087235.1-201ENST00000538297 NUBP1P53384 320 aa14.57□□□□□ -0.08
AC087235.1-201ENST00000538297 LMOD3Q0VAK6 560 aa14.57□□□□□ -0.08
AC087235.1-201ENST00000538297 MTHFSDQ2M296 383 aaKnown RBP14.57□□□□□ -0.08
AC087235.1-201ENST00000538297 CCDC184Q52MB2 194 aa14.57□□□□□ -0.08
AC087235.1-201ENST00000538297 PHACTR3Q96KR7 559 aa14.57□□□□□ -0.08
AC087235.1-201ENST00000538297 NFE2L2Q16236 605 aa14.56□□□□□ -0.08
AC087235.1-201ENST00000538297 PLCG2P16885 1265 aa14.55□□□□□ -0.08
AC087235.1-201ENST00000538297 RTF1Q92541 710 aaKnown RBP14.55□□□□□ -0.08
AC087235.1-201ENST00000538297 TMEM106CQ9BVX2 250 aa14.55□□□□□ -0.08
AC087235.1-201ENST00000538297 BCL11BQ9C0K0 894 aaPredicted RBP14.55□□□□□ -0.08
AC087235.1-201ENST00000538297 FAM212AQ96EL1 285 aa14.54□□□□□ -0.08
AC087235.1-201ENST00000538297 MAP3K5Q99683 1374 aa14.54□□□□□ -0.08
AC087235.1-201ENST00000538297 SHANK3Q9BYB0 1731 aa14.53□□□□□ -0.08
AC087235.1-201ENST00000538297 TMPOP42166 694 aaKnown RBP14.53□□□□□ -0.08
AC087235.1-201ENST00000538297 SF3B2Q13435 895 aaKnown RBP14.53□□□□□ -0.08
AC087235.1-201ENST00000538297 ILDR2Q71H61 639 aa14.52□□□□□ -0.08
AC087235.1-201ENST00000538297 ST18O60284 1047 aa14.51□□□□□ -0.09
AC087235.1-201ENST00000538297 CALD1Q05682 793 aaKnown RBP14.51□□□□□ -0.09
AC087235.1-201ENST00000538297 CCDC27Q2M243 656 aa14.51□□□□□ -0.09
AC087235.1-201ENST00000538297 FAM9BQ8IZU0 186 aa14.51□□□□□ -0.09
AC087235.1-201ENST00000538297 PLSCR1O15162 318 aa14.5□□□□□ -0.09
AC087235.1-201ENST00000538297 RNMTO43148 476 aaKnown RBP14.5□□□□□ -0.09
AC087235.1-201ENST00000538297 PRIM1P49642 420 aaKnown RBP14.5□□□□□ -0.09
AC087235.1-201ENST00000538297 RIPK4P57078 832 aa14.5□□□□□ -0.09
AC087235.1-201ENST00000538297 CABP4P57796 275 aa14.5□□□□□ -0.09
AC087235.1-201ENST00000538297 BABAM1Q9NWV8 329 aa14.5□□□□□ -0.09
AC087235.1-201ENST00000538297 TMOD3Q9NYL9 352 aa14.5□□□□□ -0.09
AC087235.1-201ENST00000538297 CEMIPQ8WUJ3 1361 aa14.5□□□□□ -0.09
AC087235.1-201ENST00000538297 APAF1O14727 1248 aa14.49□□□□□ -0.09
AC087235.1-201ENST00000538297 TEFQ10587 303 aa14.49□□□□□ -0.09
AC087235.1-201ENST00000538297 MPRIPQ6WCQ1 1025 aa14.49□□□□□ -0.09
AC087235.1-201ENST00000538297 SMARCC1Q92922 1105 aaPredicted RBP14.49□□□□□ -0.09
AC087235.1-201ENST00000538297 TRIM37O94972 964 aa14.48□□□□□ -0.09
AC087235.1-201ENST00000538297 FAM182BQ5T319 152 aa14.48□□□□□ -0.09
AC087235.1-201ENST00000538297 CCDC146Q8IYE0 955 aa14.48□□□□□ -0.09
AC087235.1-201ENST00000538297 IL17REQ8NFR9 667 aa14.48□□□□□ -0.09
AC087235.1-201ENST00000538297 SLC52A2Q9HAB3 445 aa14.48□□□□□ -0.09
AC087235.1-201ENST00000538297 FBXO3Q9UK99 471 aa14.48□□□□□ -0.09
AC087235.1-201ENST00000538297 ADAMTS7Q9UKP4 1686 aa14.48□□□□□ -0.09
AC087235.1-201ENST00000538297 SBF2Q86WG5 1849 aa14.48□□□□□ -0.09
AC087235.1-201ENST00000538297 KAT6BQ8WYB5 2073 aa14.48□□□□□ -0.09
AC087235.1-201ENST00000538297 SCN11AQ9UI33 1791 aa14.47□□□□□ -0.09
AC087235.1-201ENST00000538297 UPF1Q92900 1129 aaKnown RBP eCLIP14.47□□□□□ -0.09
AC087235.1-201ENST00000538297 SYTL4Q96C24 671 aaPredicted RBP14.47□□□□□ -0.09
AC087235.1-201ENST00000538297 NHSQ6T4R5 1651 aa14.47□□□□□ -0.09
AC087235.1-201ENST00000538297 KDM6AO15550 1401 aaPredicted RBP14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms