RNA–Protein interactions for RNA: ENST00000537320.5

TNC-211, Transcript of tenascin C, humanhuman

TSL 5 BASIC

Gene TNC, Length 4,946 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNC-211ENST00000537320 ZBTB3Q9H5J0 574 aa13.55□□□□□ -0.24
TNC-211ENST00000537320 NCBP3Q53F19 620 aaKnown RBP13.55□□□□□ -0.24
TNC-211ENST00000537320 PCMTD1Q96MG8 357 aaPredicted RBP13.55□□□□□ -0.24
TNC-211ENST00000537320 WDR33Q9C0J8 1336 aaKnown RBP13.55□□□□□ -0.24
TNC-211ENST00000537320 LARP1BQ659C4 914 aaKnown RBP13.54□□□□□ -0.24
TNC-211ENST00000537320 C8orf58Q8NAV2 365 aa13.54□□□□□ -0.24
TNC-211ENST00000537320 COL17A1Q9UMD9 1497 aaPredicted RBP13.54□□□□□ -0.24
TNC-211ENST00000537320 CTNNA3Q9UI47 895 aa13.54□□□□□ -0.24
TNC-211ENST00000537320 IKQ13123 557 aaPredicted RBP13.54□□□□□ -0.24
TNC-211ENST00000537320 UPF3BQ9BZI7 483 aaKnown RBP13.54□□□□□ -0.24
TNC-211ENST00000537320 RAI14Q9P0K7 980 aa13.54□□□□□ -0.24
TNC-211ENST00000537320 LRP2BPQ9P2M1 347 aa13.54□□□□□ -0.24
TNC-211ENST00000537320 DMRT2Q9Y5R5 561 aa13.54□□□□□ -0.24
TNC-211ENST00000537320 NPHP3Q7Z494 1330 aa13.54□□□□□ -0.24
TNC-211ENST00000537320 PIK3R4Q99570 1358 aa13.54□□□□□ -0.24
TNC-211ENST00000537320 ARHGAP45Q92619 1136 aa13.54□□□□□ -0.24
TNC-211ENST00000537320 PIK3C2GO75747 1445 aa13.54□□□□□ -0.24
TNC-211ENST00000537320 KINO60870 393 aaKnown RBP13.53□□□□□ -0.24
TNC-211ENST00000537320 NGLY1Q96IV0 654 aa13.53□□□□□ -0.24
TNC-211ENST00000537320 AKAP2Q9Y2D5 859 aa13.53□□□□□ -0.24
TNC-211ENST00000537320 ZNF652Q9Y2D9 606 aa13.53□□□□□ -0.24
TNC-211ENST00000537320 KRT32Q14532 448 aa13.53□□□□□ -0.24
TNC-211ENST00000537320 STK38Q15208 465 aa13.53□□□□□ -0.24
TNC-211ENST00000537320 CASTP20810 708 aaKnown RBP13.53□□□□□ -0.24
TNC-211ENST00000537320 ZNF592Q92610 1267 aa13.53□□□□□ -0.24
TNC-211ENST00000537320 ZNF396Q96N95 335 aaPredicted RBP13.53□□□□□ -0.24
TNC-211ENST00000537320 TRMT112Q9UI30 125 aaKnown RBP13.53□□□□□ -0.24
TNC-211ENST00000537320 ATP10AO60312 1499 aa13.53□□□□□ -0.24
TNC-211ENST00000537320 ATP5J2-PTCD1G3V325 749 aa13.53□□□□□ -0.24
TNC-211ENST00000537320 TDO2P48775 406 aa13.53□□□□□ -0.24
TNC-211ENST00000537320 IFIT5Q13325 482 aaKnown RBP13.53□□□□□ -0.24
TNC-211ENST00000537320 PLEKHH1Q9ULM0 1364 aa13.52□□□□□ -0.24
TNC-211ENST00000537320 MTHFSDQ2M296 383 aaKnown RBP13.52□□□□□ -0.24
TNC-211ENST00000537320 ABCF2Q9UG63 623 aa13.52□□□□□ -0.24
TNC-211ENST00000537320 TBX22Q9Y458 520 aa13.52□□□□□ -0.24
TNC-211ENST00000537320 FLT4P35916 1363 aa13.52□□□□□ -0.24
TNC-211ENST00000537320 PHACTR3Q96KR7 559 aa13.52□□□□□ -0.24
TNC-211ENST00000537320 ZSCAN31Q96LW9 406 aaPredicted RBP13.52□□□□□ -0.24
TNC-211ENST00000537320 PCDHB15Q9Y5E8 787 aa13.52□□□□□ -0.24
TNC-211ENST00000537320 SNRPA1P09661 255 aaKnown RBP13.52□□□□□ -0.25
TNC-211ENST00000537320 GPTP24298 496 aa13.52□□□□□ -0.25
TNC-211ENST00000537320 PPP1R42Q7Z4L9 355 aa13.52□□□□□ -0.25
TNC-211ENST00000537320 IFIT1P09914 478 aaKnown RBP13.52□□□□□ -0.25
TNC-211ENST00000537320 PDE4CQ08493 712 aa13.52□□□□□ -0.25
TNC-211ENST00000537320 PRPF40BQ6NWY9 871 aaKnown RBP13.52□□□□□ -0.25
TNC-211ENST00000537320 LRRC59Q96AG4 307 aaKnown RBP13.52□□□□□ -0.25
TNC-211ENST00000537320 CIZ1Q9ULV3 898 aaPredicted RBP13.52□□□□□ -0.25
TNC-211ENST00000537320 CCDC69A6NI79 296 aa13.51□□□□□ -0.25
TNC-211ENST00000537320 IPO7O95373 1038 aaKnown RBP13.51□□□□□ -0.25
TNC-211ENST00000537320 TRIM22Q8IYM9 498 aa13.51□□□□□ -0.25
TNC-211ENST00000537320 NUP133Q8WUM0 1156 aa13.51□□□□□ -0.25
TNC-211ENST00000537320 MEIS3Q99687 375 aa13.51□□□□□ -0.25
TNC-211ENST00000537320 NAT10Q9H0A0 1025 aaKnown RBP13.51□□□□□ -0.25
TNC-211ENST00000537320 HSP90AB3PQ58FF7 597 aa13.51□□□□□ -0.25
TNC-211ENST00000537320 CCAR2Q8N163 923 aaKnown RBP13.51□□□□□ -0.25
TNC-211ENST00000537320 GOLGA6L1Q8N7Z2 621 aa13.51□□□□□ -0.25
TNC-211ENST00000537320 SF3B2Q13435 895 aaKnown RBP13.51□□□□□ -0.25
TNC-211ENST00000537320 UBE3BQ7Z3V4 1068 aa13.51□□□□□ -0.25
TNC-211ENST00000537320 CABLES1Q8TDN4 633 aa13.51□□□□□ -0.25
TNC-211ENST00000537320 AIDAQ96BJ3 306 aa13.51□□□□□ -0.25
TNC-211ENST00000537320 CHPF2Q9P2E5 772 aa13.51□□□□□ -0.25
TNC-211ENST00000537320 LETM1O95202 739 aaPredicted RBP13.51□□□□□ -0.25
TNC-211ENST00000537320 OLFM4Q6UX06 510 aa13.51□□□□□ -0.25
TNC-211ENST00000537320 C19orf44Q9H6X5 657 aa13.51□□□□□ -0.25
TNC-211ENST00000537320 PPP1R1BQ9UD71 204 aaPredicted RBP13.51□□□□□ -0.25
TNC-211ENST00000537320 ZPR1O75312 459 aa13.5□□□□□ -0.25
TNC-211ENST00000537320 KRT85P78386 507 aa13.5□□□□□ -0.25
TNC-211ENST00000537320 SLC39A6Q13433 755 aa13.5□□□□□ -0.25
TNC-211ENST00000537320 MRPL50Q8N5N7 158 aaKnown RBP13.5□□□□□ -0.25
TNC-211ENST00000537320 HSPA2P54652 639 aa13.5□□□□□ -0.25
TNC-211ENST00000537320 ATP2B2Q01814 1243 aa13.5□□□□□ -0.25
TNC-211ENST00000537320 BMP2KLQ5H9B9 411 aa13.5□□□□□ -0.25
TNC-211ENST00000537320 CCDC43Q96MW1 224 aaKnown RBP13.5□□□□□ -0.25
TNC-211ENST00000537320 EYA1Q99502 592 aa13.5□□□□□ -0.25
TNC-211ENST00000537320 IMMTQ16891 758 aaKnown RBP13.49□□□□□ -0.25
TNC-211ENST00000537320 MCM4P33991 863 aa13.49□□□□□ -0.25
TNC-211ENST00000537320 HDAC1Q13547 482 aaPredicted RBP13.49□□□□□ -0.25
TNC-211ENST00000537320 AKAP4Q5JQC9 854 aa13.49□□□□□ -0.25
TNC-211ENST00000537320 TSPYL6Q8N831 410 aa13.49□□□□□ -0.25
TNC-211ENST00000537320 JARID2Q92833 1246 aaPredicted RBP13.49□□□□□ -0.25
TNC-211ENST00000537320 TEX13AQ9BXU3 409 aaPredicted RBP13.49□□□□□ -0.25
TNC-211ENST00000537320 TSPY26PQ9H489 355 aa13.49□□□□□ -0.25
TNC-211ENST00000537320 TNNQ9UQP3 1299 aa13.49□□□□□ -0.25
TNC-211ENST00000537320 TSHZ3Q63HK5 1081 aa13.49□□□□□ -0.25
TNC-211ENST00000537320 ANKRD13DQ6ZTN6 518 aa13.49□□□□□ -0.25
TNC-211ENST00000537320 HOMER1Q86YM7 354 aa13.49□□□□□ -0.25
TNC-211ENST00000537320 MAP3K19Q56UN5 1328 aa13.49□□□□□ -0.25
TNC-211ENST00000537320 ZCRB1Q8TBF4 217 aaKnown RBP13.49□□□□□ -0.25
TNC-211ENST00000537320 ECHDC1Q9NTX5 307 aa13.49□□□□□ -0.25
TNC-211ENST00000537320 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.48□□□□□ -0.25
TNC-211ENST00000537320 GCP02774 474 aa13.48□□□□□ -0.25
TNC-211ENST00000537320 TBC1D9Q6ZT07 1266 aa13.48□□□□□ -0.25
TNC-211ENST00000537320 UBAC1Q9BSL1 405 aa13.48□□□□□ -0.25
TNC-211ENST00000537320 ZFYVE9O95405 1425 aa13.48□□□□□ -0.25
TNC-211ENST00000537320 PDIA4P13667 645 aaKnown RBP13.48□□□□□ -0.25
TNC-211ENST00000537320 ME1P48163 572 aa13.48□□□□□ -0.25
TNC-211ENST00000537320 CWC25Q9NXE8 425 aaPredicted RBP13.48□□□□□ -0.25
TNC-211ENST00000537320 KRT24Q2M2I5 525 aa13.48□□□□□ -0.25
TNC-211ENST00000537320 JMYQ8N9B5 988 aa13.47□□□□□ -0.25
TNC-211ENST00000537320 U3KPZ7 1027 aaPredicted RBP13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms