RNA–Protein interactions for RNA: ENST00000537063.1

UBE3B-207, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 3 BASIC

Gene UBE3B, Length 3,600 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-207ENST00000537063 ANTXR1Q9H6X2 564 aa11.63□□□□□ -0.55
UBE3B-207ENST00000537063 TBC1D2Q9BYX2 928 aa11.62□□□□□ -0.55
UBE3B-207ENST00000537063 PKD1L3Q7Z443 1732 aa11.62□□□□□ -0.55
UBE3B-207ENST00000537063 MFAP1P55081 439 aaKnown RBP11.62□□□□□ -0.55
UBE3B-207ENST00000537063 NFKBIBQ15653 356 aa11.62□□□□□ -0.55
UBE3B-207ENST00000537063 AMOTQ4VCS5 1084 aa11.62□□□□□ -0.55
UBE3B-207ENST00000537063 KRT28Q7Z3Y7 464 aa11.62□□□□□ -0.55
UBE3B-207ENST00000537063 HEG1Q9ULI3 1381 aa11.62□□□□□ -0.55
UBE3B-207ENST00000537063 DNAJC5Q9H3Z4 198 aa11.61□□□□□ -0.55
UBE3B-207ENST00000537063 TMEM94Q12767 1356 aa11.61□□□□□ -0.55
UBE3B-207ENST00000537063 GSPT1P15170 499 aaKnown RBP11.61□□□□□ -0.55
UBE3B-207ENST00000537063 DEKP35659 375 aaKnown RBP11.61□□□□□ -0.55
UBE3B-207ENST00000537063 EIF4A1P60842 406 aaKnown RBP11.61□□□□□ -0.55
UBE3B-207ENST00000537063 F6X3S4 739 aa11.61□□□□□ -0.55
UBE3B-207ENST00000537063 LRRC59Q96AG4 307 aaKnown RBP11.61□□□□□ -0.55
UBE3B-207ENST00000537063 TTC22Q5TAA0 569 aa11.6□□□□□ -0.55
UBE3B-207ENST00000537063 PLEKHO1Q53GL0 409 aaPredicted RBP11.6□□□□□ -0.55
UBE3B-207ENST00000537063 TBC1D9Q6ZT07 1266 aa11.6□□□□□ -0.55
UBE3B-207ENST00000537063 ANKRD24Q8TF21 1146 aa11.6□□□□□ -0.55
UBE3B-207ENST00000537063 PARP4Q9UKK3 1724 aaKnown RBP11.6□□□□□ -0.55
UBE3B-207ENST00000537063 LGR6Q9HBX8 967 aa11.6□□□□□ -0.55
UBE3B-207ENST00000537063 XPCQ01831 940 aaPredicted RBP11.59□□□□□ -0.55
UBE3B-207ENST00000537063 MRC1P22897 1456 aa11.59□□□□□ -0.55
UBE3B-207ENST00000537063 HMMRO75330 724 aa11.59□□□□□ -0.55
UBE3B-207ENST00000537063 AXIN2Q9Y2T1 843 aa11.59□□□□□ -0.55
UBE3B-207ENST00000537063 ERBB3P21860 1342 aa11.59□□□□□ -0.55
UBE3B-207ENST00000537063 TNS3Q68CZ2 1445 aa11.59□□□□□ -0.55
UBE3B-207ENST00000537063 CDC45O75419 566 aa11.59□□□□□ -0.55
UBE3B-207ENST00000537063 GNAI2P04899 355 aa11.59□□□□□ -0.55
UBE3B-207ENST00000537063 SNX21Q969T3 373 aa11.59□□□□□ -0.55
UBE3B-207ENST00000537063 GNAI3P08754 354 aa11.58□□□□□ -0.56
UBE3B-207ENST00000537063 ZNF530Q6P9A1 599 aaPredicted RBP11.58□□□□□ -0.56
UBE3B-207ENST00000537063 OSBPL3Q9H4L5 887 aa11.58□□□□□ -0.56
UBE3B-207ENST00000537063 STRCQ7RTU9 1775 aa11.58□□□□□ -0.56
UBE3B-207ENST00000537063 C5P01031 1676 aa11.58□□□□□ -0.56
UBE3B-207ENST00000537063 RNMTO43148 476 aaKnown RBP11.58□□□□□ -0.56
UBE3B-207ENST00000537063 FKBP5Q13451 457 aaPredicted RBP11.58□□□□□ -0.56
UBE3B-207ENST00000537063 KIF2CQ99661 725 aa11.58□□□□□ -0.56
UBE3B-207ENST00000537063 CHMP4AQ9BY43 222 aa11.58□□□□□ -0.56
UBE3B-207ENST00000537063 SALL3Q9BXA9 1300 aa11.58□□□□□ -0.56
UBE3B-207ENST00000537063 EIF5BO60841 1220 aaKnown RBP11.58□□□□□ -0.56
UBE3B-207ENST00000537063 HDGFL1Q5TGJ6 251 aa11.58□□□□□ -0.56
UBE3B-207ENST00000537063 SLC4A10Q6U841 1118 aa11.57□□□□□ -0.56
UBE3B-207ENST00000537063 ABCA3Q99758 1704 aa11.56□□□□□ -0.56
UBE3B-207ENST00000537063 IBTKQ9P2D0 1353 aaPredicted RBP11.56□□□□□ -0.56
UBE3B-207ENST00000537063 ATP8B2P98198 1209 aa11.56□□□□□ -0.56
UBE3B-207ENST00000537063 C16orf71Q8IYS4 520 aaPredicted RBP11.56□□□□□ -0.56
UBE3B-207ENST00000537063 OTUD7AQ8TE49 926 aaPredicted RBP11.56□□□□□ -0.56
UBE3B-207ENST00000537063 CPDO75976 1380 aa11.56□□□□□ -0.56
UBE3B-207ENST00000537063 GLI3P10071 1580 aa11.55□□□□□ -0.56
UBE3B-207ENST00000537063 USP44Q9H0E7 712 aa11.55□□□□□ -0.56
UBE3B-207ENST00000537063 KDM6AO15550 1401 aaPredicted RBP11.55□□□□□ -0.56
UBE3B-207ENST00000537063 ATF3P18847 181 aa11.55□□□□□ -0.56
UBE3B-207ENST00000537063 DDIT3P35638 169 aa11.55□□□□□ -0.56
UBE3B-207ENST00000537063 MEGF6O75095 1541 aa11.55□□□□□ -0.56
UBE3B-207ENST00000537063 PHAXQ9H814 394 aaKnown RBP11.55□□□□□ -0.56
UBE3B-207ENST00000537063 ADCY9O60503 1353 aa11.55□□□□□ -0.56
UBE3B-207ENST00000537063 BTBD11A6QL63 1104 aa11.54□□□□□ -0.56
UBE3B-207ENST00000537063 KCNQ3O43525 872 aa11.54□□□□□ -0.56
UBE3B-207ENST00000537063 C1orf141Q5JVX7 400 aa11.54□□□□□ -0.56
UBE3B-207ENST00000537063 NPHP3Q7Z494 1330 aa11.54□□□□□ -0.56
UBE3B-207ENST00000537063 TEFQ10587 303 aa11.54□□□□□ -0.56
UBE3B-207ENST00000537063 MPRIPQ6WCQ1 1025 aa11.54□□□□□ -0.56
UBE3B-207ENST00000537063 ZBTB7CA1YPR0 619 aa11.54□□□□□ -0.56
UBE3B-207ENST00000537063 SMARCA5O60264 1052 aaPredicted RBP11.54□□□□□ -0.56
UBE3B-207ENST00000537063 NECTIN2Q92692 538 aa11.54□□□□□ -0.56
UBE3B-207ENST00000537063 LAMB4A4D0S4 1761 aa11.54□□□□□ -0.56
UBE3B-207ENST00000537063 FRAT2O75474 233 aaPredicted RBP11.53□□□□□ -0.56
UBE3B-207ENST00000537063 CADPS2Q86UW7 1296 aa11.53□□□□□ -0.56
UBE3B-207ENST00000537063 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.53□□□□□ -0.56
UBE3B-207ENST00000537063 CHPF2Q9P2E5 772 aa11.53□□□□□ -0.56
UBE3B-207ENST00000537063 PNMA6EA0A0J9YXQ4 647 aa11.53□□□□□ -0.56
UBE3B-207ENST00000537063 POLA2Q14181 598 aa11.53□□□□□ -0.56
UBE3B-207ENST00000537063 SSH3Q8TE77 659 aa11.53□□□□□ -0.56
UBE3B-207ENST00000537063 SPATA31A3Q5VYP0 1347 aa11.53□□□□□ -0.56
UBE3B-207ENST00000537063 SDSP20132 328 aa11.53□□□□□ -0.56
UBE3B-207ENST00000537063 BEND3Q5T5X7 828 aa11.53□□□□□ -0.56
UBE3B-207ENST00000537063 GIGYF1O75420 1035 aaPredicted RBP11.52□□□□□ -0.56
UBE3B-207ENST00000537063 LRRFIP2Q9Y608 721 aaKnown RBP11.52□□□□□ -0.56
UBE3B-207ENST00000537063 PDE1AP54750 535 aa11.52□□□□□ -0.57
UBE3B-207ENST00000537063 HSCBQ8IWL3 235 aa11.52□□□□□ -0.57
UBE3B-207ENST00000537063 AOX1Q06278 1338 aa11.52□□□□□ -0.57
UBE3B-207ENST00000537063 SRCIN1Q9C0H9 1055 aa11.52□□□□□ -0.57
UBE3B-207ENST00000537063 SLKQ9H2G2 1235 aaPredicted RBP11.52□□□□□ -0.57
UBE3B-207ENST00000537063 STAP2Q9UGK3 403 aa11.52□□□□□ -0.57
UBE3B-207ENST00000537063 PAPPAQ13219 1627 aa11.51□□□□□ -0.57
UBE3B-207ENST00000537063 UBTFL1P0CB47 393 aaPredicted RBP11.51□□□□□ -0.57
UBE3B-207ENST00000537063 LMOD2Q6P5Q4 547 aa11.51□□□□□ -0.57
UBE3B-207ENST00000537063 DNAAF4Q8WXU2 420 aa11.51□□□□□ -0.57
UBE3B-207ENST00000537063 DBF4Q9UBU7 674 aaPredicted RBP11.51□□□□□ -0.57
UBE3B-207ENST00000537063 LRRCC1Q9C099 1032 aa11.51□□□□□ -0.57
UBE3B-207ENST00000537063 UBR2Q8IWV8 1755 aa11.51□□□□□ -0.57
UBE3B-207ENST00000537063 SHANK3Q9BYB0 1731 aa11.5□□□□□ -0.57
UBE3B-207ENST00000537063 USP26Q9BXU7 913 aa11.5□□□□□ -0.57
UBE3B-207ENST00000537063 NHSL1Q5SYE7 1610 aa11.5□□□□□ -0.57
UBE3B-207ENST00000537063 AK9Q5TCS8 1911 aa11.5□□□□□ -0.57
UBE3B-207ENST00000537063 EXOC6BQ9Y2D4 811 aa11.5□□□□□ -0.57
UBE3B-207ENST00000537063 ZC3H6P61129 1189 aaKnown RBP11.49□□□□□ -0.57
UBE3B-207ENST00000537063 MTX1Q13505 466 aa11.49□□□□□ -0.57
UBE3B-207ENST00000537063 DDX17Q92841 729 aaKnown RBP11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms