RNA–Protein interactions for RNA: ENST00000536688.5

RFX4-204, Transcript of regulatory factor X4, humanhuman

TSL 1 (best)

Gene RFX4, Length 2,186 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4-204ENST00000536688 TMX3Q96JJ7 454 aa12.12□□□□□ -0.47
RFX4-204ENST00000536688 TRERF1Q96PN7 1200 aa12.12□□□□□ -0.47
RFX4-204ENST00000536688 UBXN6Q9BZV1 441 aa12.12□□□□□ -0.47
RFX4-204ENST00000536688 DONSONQ9NYP3 566 aa12.12□□□□□ -0.47
RFX4-204ENST00000536688 RPAP1Q9BWH6 1393 aaPredicted RBP12.12□□□□□ -0.47
RFX4-204ENST00000536688 DUOX2Q9NRD8 1548 aa12.12□□□□□ -0.47
RFX4-204ENST00000536688 ABCA8O94911 1581 aa12.12□□□□□ -0.47
RFX4-204ENST00000536688 AP5Z1O43299 807 aa12.11□□□□□ -0.47
RFX4-204ENST00000536688 GADD45BO75293 160 aaPredicted RBP12.11□□□□□ -0.47
RFX4-204ENST00000536688 TUBB4AP04350 444 aa12.11□□□□□ -0.47
RFX4-204ENST00000536688 TTC22Q5TAA0 569 aa12.11□□□□□ -0.47
RFX4-204ENST00000536688 NYAP1Q6ZVC0 841 aa12.11□□□□□ -0.47
RFX4-204ENST00000536688 KCNG1Q9UIX4 513 aa12.11□□□□□ -0.47
RFX4-204ENST00000536688 KIAA1210Q9ULL0 1709 aa12.11□□□□□ -0.47
RFX4-204ENST00000536688 PLEKHG2Q9H7P9 1386 aa12.11□□□□□ -0.47
RFX4-204ENST00000536688 PNMA6AP0CW24 399 aaPredicted RBP12.11□□□□□ -0.47
RFX4-204ENST00000536688 CCDC192P0DO97 292 aa12.11□□□□□ -0.47
RFX4-204ENST00000536688 GSPT1P15170 499 aaKnown RBP12.11□□□□□ -0.47
RFX4-204ENST00000536688 CDC25BP30305 580 aa12.11□□□□□ -0.47
RFX4-204ENST00000536688 ZSCAN26Q16670 478 aa12.11□□□□□ -0.47
RFX4-204ENST00000536688 TPD52L1Q16890 204 aaPredicted RBP12.11□□□□□ -0.47
RFX4-204ENST00000536688 ZSCAN25Q6NSZ9 544 aa12.11□□□□□ -0.47
RFX4-204ENST00000536688 KRBA2Q6ZNG9 492 aa12.11□□□□□ -0.47
RFX4-204ENST00000536688 RPAINQ86UA6 219 aa12.11□□□□□ -0.47
RFX4-204ENST00000536688 SUGP1Q8IWZ8 645 aaKnown RBP12.11□□□□□ -0.47
RFX4-204ENST00000536688 FBXO18Q8NFZ0 1043 aa12.11□□□□□ -0.47
RFX4-204ENST00000536688 FAM200AQ8TCP9 573 aa12.11□□□□□ -0.47
RFX4-204ENST00000536688 NOB1Q9ULX3 412 aaKnown RBP12.11□□□□□ -0.47
RFX4-204ENST00000536688 ZCCHC11Q5TAX3 1644 aaKnown RBP12.1□□□□□ -0.47
RFX4-204ENST00000536688 USP32Q8NFA0 1604 aa12.1□□□□□ -0.47
RFX4-204ENST00000536688 RTL1A6NKG5 1358 aa12.1□□□□□ -0.47
RFX4-204ENST00000536688 HSP90B1P14625 803 aaKnown RBP12.1□□□□□ -0.47
RFX4-204ENST00000536688 ATP2B1P20020 1258 aa12.1□□□□□ -0.47
RFX4-204ENST00000536688 SAMD1Q6SPF0 538 aaPredicted RBP12.1□□□□□ -0.47
RFX4-204ENST00000536688 CCDC91Q7Z6B0 441 aa12.1□□□□□ -0.47
RFX4-204ENST00000536688 ZBTB9Q96C00 473 aa12.1□□□□□ -0.47
RFX4-204ENST00000536688 ZNF518AQ6AHZ1 1483 aa12.1□□□□□ -0.47
RFX4-204ENST00000536688 ASXL2Q76L83 1435 aa12.1□□□□□ -0.47
RFX4-204ENST00000536688 ZRANB2O95218 330 aaKnown RBP eCLIP12.09□□□□□ -0.47
RFX4-204ENST00000536688 MAGEA9P43362 315 aa12.09□□□□□ -0.47
RFX4-204ENST00000536688 PLA2G4AP47712 749 aa12.09□□□□□ -0.47
RFX4-204ENST00000536688 GSCP56915 257 aaPredicted RBP12.09□□□□□ -0.47
RFX4-204ENST00000536688 ELF2Q15723 593 aa12.09□□□□□ -0.47
RFX4-204ENST00000536688 PLEKHM2Q8IWE5 1019 aa12.09□□□□□ -0.47
RFX4-204ENST00000536688 C10orf67Q8IYJ2 551 aa12.09□□□□□ -0.47
RFX4-204ENST00000536688 CHMP4CQ96CF2 233 aa12.09□□□□□ -0.47
RFX4-204ENST00000536688 ST7Q9NRC1 585 aa12.09□□□□□ -0.47
RFX4-204ENST00000536688 LRRFIP2Q9Y608 721 aaKnown RBP12.09□□□□□ -0.47
RFX4-204ENST00000536688 DIP2BQ9P265 1576 aa12.09□□□□□ -0.47
RFX4-204ENST00000536688 ANAPC15P60006 121 aa12.09□□□□□ -0.47
RFX4-204ENST00000536688 SATB1Q01826 763 aa12.09□□□□□ -0.47
RFX4-204ENST00000536688 GRIPAP1Q4V328 841 aa12.09□□□□□ -0.47
RFX4-204ENST00000536688 CT47A1Q5JQC4 288 aaPredicted RBP12.09□□□□□ -0.47
RFX4-204ENST00000536688 CCDC186Q7Z3E2 898 aa12.09□□□□□ -0.47
RFX4-204ENST00000536688 CNPY4Q8N129 248 aa12.09□□□□□ -0.47
RFX4-204ENST00000536688 SPC24Q8NBT2 197 aa12.09□□□□□ -0.47
RFX4-204ENST00000536688 CCDC191Q8NCU4 936 aa12.09□□□□□ -0.47
RFX4-204ENST00000536688 ARHGAP45Q92619 1136 aa12.09□□□□□ -0.47
RFX4-204ENST00000536688 CHAMP1Q96JM3 812 aa12.09□□□□□ -0.47
RFX4-204ENST00000536688 AK7Q96M32 723 aa12.09□□□□□ -0.47
RFX4-204ENST00000536688 DEF6Q9H4E7 631 aa12.09□□□□□ -0.47
RFX4-204ENST00000536688 L2HGDHQ9H9P8 463 aa12.09□□□□□ -0.47
RFX4-204ENST00000536688 ARGLU1Q9NWB6 273 aaPredicted RBP12.09□□□□□ -0.47
RFX4-204ENST00000536688 IQGAP3Q86VI3 1631 aa12.09□□□□□ -0.47
RFX4-204ENST00000536688 ATP10BO94823 1461 aa12.09□□□□□ -0.47
RFX4-204ENST00000536688 ERBB3P21860 1342 aa12.08□□□□□ -0.48
RFX4-204ENST00000536688 PLEKHD1A6NEE1 506 aa12.08□□□□□ -0.48
RFX4-204ENST00000536688 IVLP07476 585 aa12.08□□□□□ -0.48
RFX4-204ENST00000536688 TTC31Q49AM3 519 aaPredicted RBP12.08□□□□□ -0.48
RFX4-204ENST00000536688 MED4Q9NPJ6 270 aa12.08□□□□□ -0.48
RFX4-204ENST00000536688 RRP15Q9Y3B9 282 aaKnown RBP12.08□□□□□ -0.48
RFX4-204ENST00000536688 ATP6V1DQ9Y5K8 247 aa12.08□□□□□ -0.48
RFX4-204ENST00000536688 ZBTB7BO15156 539 aaPredicted RBP12.08□□□□□ -0.48
RFX4-204ENST00000536688 PTPN14Q15678 1187 aa12.08□□□□□ -0.48
RFX4-204ENST00000536688 NEUROD2Q15784 382 aa12.08□□□□□ -0.48
RFX4-204ENST00000536688 FILIP1Q7Z7B0 1213 aa12.08□□□□□ -0.48
RFX4-204ENST00000536688 PLA2G4DQ86XP0 818 aa12.08□□□□□ -0.48
RFX4-204ENST00000536688 EXOC4Q96A65 974 aa12.08□□□□□ -0.48
RFX4-204ENST00000536688 RRP7AQ9Y3A4 280 aaKnown RBP12.08□□□□□ -0.48
RFX4-204ENST00000536688 TCHHQ07283 1943 aa12.08□□□□□ -0.48
RFX4-204ENST00000536688 KIF24Q5T7B8 1368 aa12.07□□□□□ -0.48
RFX4-204ENST00000536688 AATKQ6ZMQ8 1374 aa12.07□□□□□ -0.48
RFX4-204ENST00000536688 EXOSC9Q06265 439 aaKnown RBP12.07□□□□□ -0.48
RFX4-204ENST00000536688 RGL3Q3MIN7 710 aa12.07□□□□□ -0.48
RFX4-204ENST00000536688 ERC2O15083 957 aa12.06□□□□□ -0.48
RFX4-204ENST00000536688 NEK11Q8NG66 645 aa12.06□□□□□ -0.48
RFX4-204ENST00000536688 CFAP53Q96M91 514 aa12.06□□□□□ -0.48
RFX4-204ENST00000536688 RGS12O14924 1447 aa12.06□□□□□ -0.48
RFX4-204ENST00000536688 TRIM66O15016 1216 aa12.06□□□□□ -0.48
RFX4-204ENST00000536688 U2SURPO15042 1029 aaKnown RBP12.06□□□□□ -0.48
RFX4-204ENST00000536688 RPS6KA5O75582 802 aa12.06□□□□□ -0.48
RFX4-204ENST00000536688 CAVIN2O95810 425 aa12.06□□□□□ -0.48
RFX4-204ENST00000536688 TPM1P09493 284 aa12.06□□□□□ -0.48
RFX4-204ENST00000536688 TSPY4P0CV99 314 aa12.06□□□□□ -0.48
RFX4-204ENST00000536688 TSPY10P0CW01 314 aa12.06□□□□□ -0.48
RFX4-204ENST00000536688 CLCN6P51797 869 aa12.06□□□□□ -0.48
RFX4-204ENST00000536688 PLCB2Q00722 1185 aa12.06□□□□□ -0.48
RFX4-204ENST00000536688 PTCH1Q13635 1447 aa12.06□□□□□ -0.48
RFX4-204ENST00000536688 SPHKAPQ2M3C7 1700 aa12.06□□□□□ -0.48
RFX4-204ENST00000536688 RTF1Q92541 710 aaKnown RBP12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms