RNA–Protein interactions for RNA: ENST00000535504.1

SSPN-204, Transcript of sarcospan, humanhuman

TSL 1 (best) BASIC

Gene SSPN, Length 419 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSPN-204ENST00000535504 ATG3Q9NT62 314 aa28.96■■■□□ 2.23
SSPN-204ENST00000535504 TFCP2L1Q9NZI6 479 aa28.96■■■□□ 2.23
SSPN-204ENST00000535504 RBM42Q9BTD8 480 aaKnown RBP28.95■■■□□ 2.22
SSPN-204ENST00000535504 ATP6V1AP38606 617 aa28.94■■■□□ 2.22
SSPN-204ENST00000535504 KCNQ4P56696 695 aa28.94■■■□□ 2.22
SSPN-204ENST00000535504 LGR6Q9HBX8 967 aa28.94■■■□□ 2.22
SSPN-204ENST00000535504 PAPPAQ13219 1627 aa28.92■■■□□ 2.22
SSPN-204ENST00000535504 TTC5Q8N0Z6 440 aa28.91■■■□□ 2.22
SSPN-204ENST00000535504 AK7Q96M32 723 aa28.91■■■□□ 2.22
SSPN-204ENST00000535504 VIRMAQ69YN4 1812 aaKnown RBP28.91■■■□□ 2.22
SSPN-204ENST00000535504 HTATSF1O43719 755 aaKnown RBP28.9■■■□□ 2.22
SSPN-204ENST00000535504 C5P01031 1676 aa28.89■■■□□ 2.22
SSPN-204ENST00000535504 ZNF827Q17R98 1081 aa28.89■■■□□ 2.22
SSPN-204ENST00000535504 AKT1S1Q96B36 256 aa28.89■■■□□ 2.22
SSPN-204ENST00000535504 MRC1P22897 1456 aa28.89■■■□□ 2.22
SSPN-204ENST00000535504 SPON1Q9HCB6 807 aa28.88■■■□□ 2.21
SSPN-204ENST00000535504 PTCD1O75127 700 aaKnown RBP28.87■■■□□ 2.21
SSPN-204ENST00000535504 FLAD1Q8NFF5 587 aa28.87■■■□□ 2.21
SSPN-204ENST00000535504 MSH5O43196 834 aa28.86■■■□□ 2.21
SSPN-204ENST00000535504 NFE2L2Q16236 605 aa28.85■■■□□ 2.21
SSPN-204ENST00000535504 PLEKHF1Q96S99 279 aa28.85■■■□□ 2.21
SSPN-204ENST00000535504 ADAMTS7Q9UKP4 1686 aa28.85■■■□□ 2.21
SSPN-204ENST00000535504 IL17REQ8NFR9 667 aa28.84■■■□□ 2.21
SSPN-204ENST00000535504 TAF1LQ8IZX4 1826 aa28.83■■■□□ 2.21
SSPN-204ENST00000535504 LMOD3Q0VAK6 560 aa28.83■■■□□ 2.21
SSPN-204ENST00000535504 SLC16A10Q8TF71 515 aa28.82■■■□□ 2.2
SSPN-204ENST00000535504 PPP1R1BQ9UD71 204 aaPredicted RBP28.82■■■□□ 2.2
SSPN-204ENST00000535504 LRP5O75197 1615 aa28.82■■■□□ 2.2
SSPN-204ENST00000535504 C4BP0C0L5 1744 aa28.82■■■□□ 2.2
SSPN-204ENST00000535504 CEMIPQ8WUJ3 1361 aa28.81■■■□□ 2.2
SSPN-204ENST00000535504 MCM10Q7L590 875 aa28.81■■■□□ 2.2
SSPN-204ENST00000535504 RUNDC1Q96C34 613 aa28.81■■■□□ 2.2
SSPN-204ENST00000535504 QSER1Q2KHR3 1735 aa28.8■■■□□ 2.2
SSPN-204ENST00000535504 ZNF831Q5JPB2 1677 aa28.8■■■□□ 2.2
SSPN-204ENST00000535504 BTBD11A6QL63 1104 aa28.8■■■□□ 2.2
SSPN-204ENST00000535504 SLC39A6Q13433 755 aa28.8■■■□□ 2.2
SSPN-204ENST00000535504 MTFR1LQ9H019 292 aa28.8■■■□□ 2.2
SSPN-204ENST00000535504 ZBTB7AO95365 584 aa28.79■■■□□ 2.2
SSPN-204ENST00000535504 ITPK1Q13572 414 aa28.79■■■□□ 2.2
SSPN-204ENST00000535504 LINC00116Q8NCU8 138 aa28.79■■■□□ 2.2
SSPN-204ENST00000535504 CASZ1Q86V15 1759 aa28.78■■■□□ 2.2
SSPN-204ENST00000535504 PNPLA7Q6ZV29 1317 aa28.78■■■□□ 2.2
SSPN-204ENST00000535504 GNPATO15228 680 aa28.78■■■□□ 2.2
SSPN-204ENST00000535504 MRS2Q9HD23 443 aa28.78■■■□□ 2.2
SSPN-204ENST00000535504 ADAMTS8Q9UP79 889 aa28.78■■■□□ 2.2
SSPN-204ENST00000535504 RIPK4P57078 832 aa28.77■■■□□ 2.2
SSPN-204ENST00000535504 CCDC146Q8IYE0 955 aa28.77■■■□□ 2.2
SSPN-204ENST00000535504 SSFA2P28290 1259 aa28.76■■■□□ 2.19
SSPN-204ENST00000535504 ZNF790Q6PG37 636 aa28.76■■■□□ 2.19
SSPN-204ENST00000535504 PNISRQ8TF01 805 aaKnown RBP28.76■■■□□ 2.19
SSPN-204ENST00000535504 RTCBQ9Y3I0 505 aaKnown RBP28.76■■■□□ 2.19
SSPN-204ENST00000535504 PHF14O94880 888 aa28.75■■■□□ 2.19
SSPN-204ENST00000535504 DCTN1Q14203 1278 aa28.75■■■□□ 2.19
SSPN-204ENST00000535504 RC3H1Q5TC82 1133 aaKnown RBP28.75■■■□□ 2.19
SSPN-204ENST00000535504 VSIG10Q8N0Z9 540 aa28.75■■■□□ 2.19
SSPN-204ENST00000535504 ATF5Q9Y2D1 282 aaPredicted RBP28.75■■■□□ 2.19
SSPN-204ENST00000535504 CNTNAP4Q9C0A0 1308 aa28.74■■■□□ 2.19
SSPN-204ENST00000535504 POLD1P28340 1107 aa28.74■■■□□ 2.19
SSPN-204ENST00000535504 FMNL2Q96PY5 1086 aa28.74■■■□□ 2.19
SSPN-204ENST00000535504 DLG5Q8TDM6 1919 aa28.73■■■□□ 2.19
SSPN-204ENST00000535504 TMPOP42166 694 aaKnown RBP28.73■■■□□ 2.19
SSPN-204ENST00000535504 TAF7Q15545 349 aaPredicted RBP28.73■■■□□ 2.19
SSPN-204ENST00000535504 TEX13AQ9BXU3 409 aaPredicted RBP28.73■■■□□ 2.19
SSPN-204ENST00000535504 PDGFDQ9GZP0 370 aaPredicted RBP28.73■■■□□ 2.19
SSPN-204ENST00000535504 TUBGCP6Q96RT7 1819 aa28.72■■■□□ 2.19
SSPN-204ENST00000535504 NEUROD2Q15784 382 aa28.72■■■□□ 2.19
SSPN-204ENST00000535504 SLC4A9Q96Q91 983 aa28.72■■■□□ 2.19
SSPN-204ENST00000535504 SIPA1L3O60292 1781 aaPredicted RBP28.71■■■□□ 2.19
SSPN-204ENST00000535504 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP28.71■■■□□ 2.19
SSPN-204ENST00000535504 STARD3NLO95772 234 aa28.71■■■□□ 2.19
SSPN-204ENST00000535504 COL23A1Q86Y22 540 aaPredicted RBP28.71■■■□□ 2.19
SSPN-204ENST00000535504 ADRA2BP18089 450 aa28.7■■■□□ 2.18
SSPN-204ENST00000535504 TRAPPC3LQ5T215 181 aa28.7■■■□□ 2.18
SSPN-204ENST00000535504 CRKLP46109 303 aaKnown RBP28.69■■■□□ 2.18
SSPN-204ENST00000535504 DNAJC10Q8IXB1 793 aa28.69■■■□□ 2.18
SSPN-204ENST00000535504 KCPQ6ZWJ8 1503 aa28.69■■■□□ 2.18
SSPN-204ENST00000535504 NPM2Q86SE8 214 aaKnown RBP28.68■■■□□ 2.18
SSPN-204ENST00000535504 COL5A3P25940 1745 aaPredicted RBP28.68■■■□□ 2.18
SSPN-204ENST00000535504 HEG1Q9ULI3 1381 aa28.67■■■□□ 2.18
SSPN-204ENST00000535504 RPS6KA4O75676 772 aa28.67■■■□□ 2.18
SSPN-204ENST00000535504 ZNF496Q96IT1 587 aaPredicted RBP28.67■■■□□ 2.18
SSPN-204ENST00000535504 RRP7AQ9Y3A4 280 aaKnown RBP28.67■■■□□ 2.18
SSPN-204ENST00000535504 CICQ96RK0 1608 aaPredicted RBP28.67■■■□□ 2.18
SSPN-204ENST00000535504 UBR3Q6ZT12 1888 aa28.67■■■□□ 2.18
SSPN-204ENST00000535504 UBR2Q8IWV8 1755 aa28.67■■■□□ 2.18
SSPN-204ENST00000535504 CCDC87Q9NVE4 849 aa28.66■■■□□ 2.18
SSPN-204ENST00000535504 RFC4P35249 363 aa28.65■■■□□ 2.18
SSPN-204ENST00000535504 TJP1Q07157 1748 aa28.65■■■□□ 2.18
SSPN-204ENST00000535504 SNRPA1P09661 255 aaKnown RBP28.62■■■□□ 2.17
SSPN-204ENST00000535504 CYP19A1P11511 503 aaPredicted RBP28.62■■■□□ 2.17
SSPN-204ENST00000535504 THUMPD2Q9BTF0 503 aaKnown RBP28.62■■■□□ 2.17
SSPN-204ENST00000535504 CALD1Q05682 793 aaKnown RBP28.61■■■□□ 2.17
SSPN-204ENST00000535504 CCDC184Q52MB2 194 aa28.61■■■□□ 2.17
SSPN-204ENST00000535504 ARXQ96QS3 562 aa28.61■■■□□ 2.17
SSPN-204ENST00000535504 TSPYL4Q9UJ04 414 aa28.61■■■□□ 2.17
SSPN-204ENST00000535504 APAF1O14727 1248 aa28.6■■■□□ 2.17
SSPN-204ENST00000535504 MSL1Q68DK7 614 aa28.6■■■□□ 2.17
SSPN-204ENST00000535504 BABAM1Q9NWV8 329 aa28.6■■■□□ 2.17
SSPN-204ENST00000535504 KCNQ3O43525 872 aa28.59■■■□□ 2.17
SSPN-204ENST00000535504 PTGER2P43116 358 aa28.59■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms