RNA–Protein interactions for RNA: ENST00000535181.5

CHFR-209, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 753 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-209ENST00000535181 SIPA1L3O60292 1781 aaPredicted RBP27.16■■□□□ 1.94
CHFR-209ENST00000535181 CCER2I3L3R5 266 aa27.15■■□□□ 1.94
CHFR-209ENST00000535181 SLC27A3Q5K4L6 730 aa27.15■■□□□ 1.94
CHFR-209ENST00000535181 NFATC2IPQ8NCF5 419 aa27.15■■□□□ 1.94
CHFR-209ENST00000535181 RTF1Q92541 710 aaKnown RBP27.15■■□□□ 1.94
CHFR-209ENST00000535181 CCDC146Q8IYE0 955 aa27.14■■□□□ 1.94
CHFR-209ENST00000535181 PAPPAQ13219 1627 aa27.14■■□□□ 1.94
CHFR-209ENST00000535181 TMPOP42166 694 aaKnown RBP27.13■■□□□ 1.93
CHFR-209ENST00000535181 ATG3Q9NT62 314 aa27.13■■□□□ 1.93
CHFR-209ENST00000535181 ZNF831Q5JPB2 1677 aa27.11■■□□□ 1.93
CHFR-209ENST00000535181 TEFQ10587 303 aa27.11■■□□□ 1.93
CHFR-209ENST00000535181 ASAP1Q9ULH1 1129 aa27.11■■□□□ 1.93
CHFR-209ENST00000535181 HMGB2P26583 209 aaKnown RBP27.09■■□□□ 1.93
CHFR-209ENST00000535181 RIPK4P57078 832 aa27.09■■□□□ 1.93
CHFR-209ENST00000535181 LMOD3Q0VAK6 560 aa27.09■■□□□ 1.93
CHFR-209ENST00000535181 MCM10Q7L590 875 aa27.08■■□□□ 1.93
CHFR-209ENST00000535181 LRRC4BQ9NT99 713 aa27.07■■□□□ 1.92
CHFR-209ENST00000535181 CCNL1Q9UK58 526 aaPredicted RBP27.07■■□□□ 1.92
CHFR-209ENST00000535181 CICQ96RK0 1608 aaPredicted RBP27.06■■□□□ 1.92
CHFR-209ENST00000535181 UBR2Q8IWV8 1755 aa27.06■■□□□ 1.92
CHFR-209ENST00000535181 LOC102724428A0A0B4J2F2 783 aa27.05■■□□□ 1.92
CHFR-209ENST00000535181 SIK1P57059 783 aa27.05■■□□□ 1.92
CHFR-209ENST00000535181 DCTN1Q14203 1278 aa27.05■■□□□ 1.92
CHFR-209ENST00000535181 C5P01031 1676 aa27.05■■□□□ 1.92
CHFR-209ENST00000535181 TAF1LQ8IZX4 1826 aa27.04■■□□□ 1.92
CHFR-209ENST00000535181 NBPF14Q5TI25 921 aa27.04■■□□□ 1.92
CHFR-209ENST00000535181 APAF1O14727 1248 aa27.03■■□□□ 1.92
CHFR-209ENST00000535181 KCPQ6ZWJ8 1503 aa27.03■■□□□ 1.92
CHFR-209ENST00000535181 NCBP3Q53F19 620 aaKnown RBP27.02■■□□□ 1.92
CHFR-209ENST00000535181 RRP7AQ9Y3A4 280 aaKnown RBP27.02■■□□□ 1.92
CHFR-209ENST00000535181 MIER1Q8N108 512 aa27.01■■□□□ 1.91
CHFR-209ENST00000535181 TRIM35Q9UPQ4 493 aa27.01■■□□□ 1.91
CHFR-209ENST00000535181 TAF7Q15545 349 aaPredicted RBP27■■□□□ 1.91
CHFR-209ENST00000535181 ZNF790Q6PG37 636 aa27■■□□□ 1.91
CHFR-209ENST00000535181 FAM9BQ8IZU0 186 aa27■■□□□ 1.91
CHFR-209ENST00000535181 ANO8Q9HCE9 1232 aaPredicted RBP27■■□□□ 1.91
CHFR-209ENST00000535181 BTBD11A6QL63 1104 aa26.99■■□□□ 1.91
CHFR-209ENST00000535181 SLC39A6Q13433 755 aa26.99■■□□□ 1.91
CHFR-209ENST00000535181 NEUROD2Q15784 382 aa26.99■■□□□ 1.91
CHFR-209ENST00000535181 TTC5Q8N0Z6 440 aa26.98■■□□□ 1.91
CHFR-209ENST00000535181 SLC4A9Q96Q91 983 aa26.98■■□□□ 1.91
CHFR-209ENST00000535181 COL5A3P25940 1745 aaPredicted RBP26.98■■□□□ 1.91
CHFR-209ENST00000535181 KDM3BQ7LBC6 1761 aa26.97■■□□□ 1.91
CHFR-209ENST00000535181 ATP6V1AP38606 617 aa26.97■■□□□ 1.91
CHFR-209ENST00000535181 KCNQ4P56696 695 aa26.97■■□□□ 1.91
CHFR-209ENST00000535181 AKT1S1Q96B36 256 aa26.97■■□□□ 1.91
CHFR-209ENST00000535181 RBM42Q9BTD8 480 aaKnown RBP26.97■■□□□ 1.91
CHFR-209ENST00000535181 THUMPD2Q9BTF0 503 aaKnown RBP26.97■■□□□ 1.91
CHFR-209ENST00000535181 STK32BQ9NY57 414 aa26.97■■□□□ 1.91
CHFR-209ENST00000535181 C4BP0C0L5 1744 aa26.96■■□□□ 1.91
CHFR-209ENST00000535181 TJP1Q07157 1748 aa26.96■■□□□ 1.91
CHFR-209ENST00000535181 QSER1Q2KHR3 1735 aa26.96■■□□□ 1.91
CHFR-209ENST00000535181 PTCD1O75127 700 aaKnown RBP26.96■■□□□ 1.91
CHFR-209ENST00000535181 SLC15A2Q16348 729 aa26.96■■□□□ 1.91
CHFR-209ENST00000535181 VSIG10Q8N0Z9 540 aa26.96■■□□□ 1.91
CHFR-209ENST00000535181 BABAM1Q9NWV8 329 aa26.96■■□□□ 1.91
CHFR-209ENST00000535181 ITPK1Q13572 414 aa26.95■■□□□ 1.9
CHFR-209ENST00000535181 CCDC27Q2M243 656 aa26.95■■□□□ 1.9
CHFR-209ENST00000535181 ZNF827Q17R98 1081 aa26.93■■□□□ 1.9
CHFR-209ENST00000535181 R3HDM1Q15032 1099 aaKnown RBP26.92■■□□□ 1.9
CHFR-209ENST00000535181 NGEFQ8N5V2 710 aa26.92■■□□□ 1.9
CHFR-209ENST00000535181 LINC00116Q8NCU8 138 aa26.92■■□□□ 1.9
CHFR-209ENST00000535181 ZNF496Q96IT1 587 aaPredicted RBP26.92■■□□□ 1.9
CHFR-209ENST00000535181 HEG1Q9ULI3 1381 aa26.92■■□□□ 1.9
CHFR-209ENST00000535181 FMNL2Q96PY5 1086 aa26.91■■□□□ 1.9
CHFR-209ENST00000535181 TUBGCP6Q96RT7 1819 aa26.9■■□□□ 1.9
CHFR-209ENST00000535181 CALD1Q05682 793 aaKnown RBP26.9■■□□□ 1.9
CHFR-209ENST00000535181 CNTNAP4Q9C0A0 1308 aa26.9■■□□□ 1.9
CHFR-209ENST00000535181 KCNQ3O43525 872 aa26.89■■□□□ 1.9
CHFR-209ENST00000535181 RC3H1Q5TC82 1133 aaKnown RBP26.89■■□□□ 1.9
CHFR-209ENST00000535181 CASZ1Q86V15 1759 aa26.88■■□□□ 1.89
CHFR-209ENST00000535181 UBR3Q6ZT12 1888 aa26.87■■□□□ 1.89
CHFR-209ENST00000535181 PSDA5PKW4 1024 aaPredicted RBP26.87■■□□□ 1.89
CHFR-209ENST00000535181 TEX13AQ9BXU3 409 aaPredicted RBP26.87■■□□□ 1.89
CHFR-209ENST00000535181 CHL1O00533 1208 aa26.86■■□□□ 1.89
CHFR-209ENST00000535181 WWC1Q8IX03 1113 aa26.86■■□□□ 1.89
CHFR-209ENST00000535181 DNAJC10Q8IXB1 793 aa26.86■■□□□ 1.89
CHFR-209ENST00000535181 AK7Q96M32 723 aa26.86■■□□□ 1.89
CHFR-209ENST00000535181 MIS18AQ9NYP9 233 aa26.86■■□□□ 1.89
CHFR-209ENST00000535181 TFCP2L1Q9NZI6 479 aa26.86■■□□□ 1.89
CHFR-209ENST00000535181 TSPYL4Q9UJ04 414 aa26.86■■□□□ 1.89
CHFR-209ENST00000535181 CFAP44Q96MT7 982 aa26.85■■□□□ 1.89
CHFR-209ENST00000535181 MYH14Q7Z406 1995 aaKnown RBP26.84■■□□□ 1.89
CHFR-209ENST00000535181 IFT57Q9NWB7 429 aa26.84■■□□□ 1.89
CHFR-209ENST00000535181 ZNF853P0CG23 659 aa26.83■■□□□ 1.89
CHFR-209ENST00000535181 CYP19A1P11511 503 aaPredicted RBP26.83■■□□□ 1.89
CHFR-209ENST00000535181 EIF4A1P60842 406 aaKnown RBP26.83■■□□□ 1.89
CHFR-209ENST00000535181 FLAD1Q8NFF5 587 aa26.83■■□□□ 1.89
CHFR-209ENST00000535181 PNPLA7Q6ZV29 1317 aa26.83■■□□□ 1.89
CHFR-209ENST00000535181 SNRPA1P09661 255 aaKnown RBP26.82■■□□□ 1.88
CHFR-209ENST00000535181 SSFA2P28290 1259 aa26.82■■□□□ 1.88
CHFR-209ENST00000535181 CRKLP46109 303 aaKnown RBP26.82■■□□□ 1.88
CHFR-209ENST00000535181 LAMB4A4D0S4 1761 aa26.81■■□□□ 1.88
CHFR-209ENST00000535181 STARD3NLO95772 234 aa26.81■■□□□ 1.88
CHFR-209ENST00000535181 GNAI1P63096 354 aa26.81■■□□□ 1.88
CHFR-209ENST00000535181 IL16Q14005 1332 aa26.81■■□□□ 1.88
CHFR-209ENST00000535181 GNPATO15228 680 aa26.8■■□□□ 1.88
CHFR-209ENST00000535181 INTS5Q6P9B9 1019 aaKnown RBP26.79■■□□□ 1.88
CHFR-209ENST00000535181 WDR63Q8IWG1 891 aa26.79■■□□□ 1.88
CHFR-209ENST00000535181 CCDC87Q9NVE4 849 aa26.79■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms