RNA–Protein interactions for RNA: ENST00000534720.1

NPIPA1-204, Transcript of nuclear pore complex interacting protein family member A1, humanhuman

TSL 5

Gene NPIPA1, Length 1,915 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1-204ENST00000534720 CRB1P82279 1406 aa8.37□□□□□ -1.07
NPIPA1-204ENST00000534720 ZBTB7CA1YPR0 619 aa8.37□□□□□ -1.07
NPIPA1-204ENST00000534720 MS4A1P11836 297 aa8.37□□□□□ -1.07
NPIPA1-204ENST00000534720 BRPF1P55201 1214 aaPredicted RBP8.37□□□□□ -1.07
NPIPA1-204ENST00000534720 DCTN1Q14203 1278 aa8.37□□□□□ -1.07
NPIPA1-204ENST00000534720 NBPF6Q5VWK0 638 aa8.37□□□□□ -1.07
NPIPA1-204ENST00000534720 FRAT1Q92837 279 aaPredicted RBP8.37□□□□□ -1.07
NPIPA1-204ENST00000534720 NBPF4Q96M43 638 aa8.37□□□□□ -1.07
NPIPA1-204ENST00000534720 CHL1O00533 1208 aa8.36□□□□□ -1.07
NPIPA1-204ENST00000534720 VAMP4O75379 141 aa8.36□□□□□ -1.07
NPIPA1-204ENST00000534720 AAMPQ13685 434 aa8.36□□□□□ -1.07
NPIPA1-204ENST00000534720 ZKSCAN2Q63HK3 967 aa8.36□□□□□ -1.07
NPIPA1-204ENST00000534720 SSH1Q8WYL5 1049 aa8.36□□□□□ -1.07
NPIPA1-204ENST00000534720 RTF1Q92541 710 aaKnown RBP8.36□□□□□ -1.07
NPIPA1-204ENST00000534720 SMC4Q9NTJ3 1288 aa8.36□□□□□ -1.07
NPIPA1-204ENST00000534720 SOS2Q07890 1332 aaPredicted RBP8.36□□□□□ -1.07
NPIPA1-204ENST00000534720 KDM3BQ7LBC6 1761 aa8.35□□□□□ -1.07
NPIPA1-204ENST00000534720 MCM10Q7L590 875 aa8.35□□□□□ -1.07
NPIPA1-204ENST00000534720 ANKRD24Q8TF21 1146 aa8.35□□□□□ -1.07
NPIPA1-204ENST00000534720 BCL2L13Q9BXK5 485 aa8.35□□□□□ -1.07
NPIPA1-204ENST00000534720 STK24Q9Y6E0 443 aa8.35□□□□□ -1.07
NPIPA1-204ENST00000534720 SIPA1L3O60292 1781 aaPredicted RBP8.35□□□□□ -1.07
NPIPA1-204ENST00000534720 KIF16BQ96L93 1317 aa8.35□□□□□ -1.07
NPIPA1-204ENST00000534720 KIAA0232Q92628 1395 aa8.35□□□□□ -1.07
NPIPA1-204ENST00000534720 MAP3K5Q99683 1374 aa8.35□□□□□ -1.07
NPIPA1-204ENST00000534720 GNAT3A8MTJ3 354 aa8.35□□□□□ -1.07
NPIPA1-204ENST00000534720 USHBP1Q8N6Y0 703 aa8.35□□□□□ -1.07
NPIPA1-204ENST00000534720 PANK1Q8TE04 598 aa8.35□□□□□ -1.07
NPIPA1-204ENST00000534720 SCN11AQ9UI33 1791 aa8.34□□□□□ -1.07
NPIPA1-204ENST00000534720 CPDO75976 1380 aa8.34□□□□□ -1.07
NPIPA1-204ENST00000534720 ADAMTS7Q9UKP4 1686 aa8.34□□□□□ -1.07
NPIPA1-204ENST00000534720 IPO8O15397 1037 aaKnown RBP8.34□□□□□ -1.07
NPIPA1-204ENST00000534720 ZC3H6P61129 1189 aaKnown RBP8.34□□□□□ -1.07
NPIPA1-204ENST00000534720 TWISTNBQ3B726 338 aaPredicted RBP8.34□□□□□ -1.07
NPIPA1-204ENST00000534720 DZIP1LQ8IYY4 767 aaKnown RBP8.34□□□□□ -1.07
NPIPA1-204ENST00000534720 AXIN2Q9Y2T1 843 aa8.34□□□□□ -1.07
NPIPA1-204ENST00000534720 LTBP4Q8N2S1 1624 aa8.34□□□□□ -1.08
NPIPA1-204ENST00000534720 ROBO1Q9Y6N7 1651 aa8.33□□□□□ -1.08
NPIPA1-204ENST00000534720 PSEN1P49768 467 aa8.33□□□□□ -1.08
NPIPA1-204ENST00000534720 EVX2Q03828 476 aa8.33□□□□□ -1.08
NPIPA1-204ENST00000534720 ATF7IPQ6VMQ6 1270 aa8.33□□□□□ -1.08
NPIPA1-204ENST00000534720 PAXIP1Q6ZW49 1069 aaPredicted RBP8.33□□□□□ -1.08
NPIPA1-204ENST00000534720 PKD1L3Q7Z443 1732 aa8.33□□□□□ -1.08
NPIPA1-204ENST00000534720 TSPYL6Q8N831 410 aa8.33□□□□□ -1.08
NPIPA1-204ENST00000534720 C8orf58Q8NAV2 365 aa8.33□□□□□ -1.08
NPIPA1-204ENST00000534720 LRRC59Q96AG4 307 aaKnown RBP8.33□□□□□ -1.08
NPIPA1-204ENST00000534720 BABAM1Q9NWV8 329 aa8.33□□□□□ -1.08
NPIPA1-204ENST00000534720 COG6Q9Y2V7 657 aa8.33□□□□□ -1.08
NPIPA1-204ENST00000534720 ERBB3P21860 1342 aa8.33□□□□□ -1.08
NPIPA1-204ENST00000534720 RLBP1P12271 317 aa8.33□□□□□ -1.08
NPIPA1-204ENST00000534720 NKX1-1Q15270 411 aaPredicted RBP8.33□□□□□ -1.08
NPIPA1-204ENST00000534720 AMOTQ4VCS5 1084 aa8.33□□□□□ -1.08
NPIPA1-204ENST00000534720 PLEKHO1Q53GL0 409 aaPredicted RBP8.33□□□□□ -1.08
NPIPA1-204ENST00000534720 MRPL50Q8N5N7 158 aaKnown RBP8.33□□□□□ -1.08
NPIPA1-204ENST00000534720 ARHGAP45Q92619 1136 aa8.33□□□□□ -1.08
NPIPA1-204ENST00000534720 NOB1Q9ULX3 412 aaKnown RBP8.33□□□□□ -1.08
NPIPA1-204ENST00000534720 TNNQ9UQP3 1299 aa8.33□□□□□ -1.08
NPIPA1-204ENST00000534720 KDM2BQ8NHM5 1336 aa8.32□□□□□ -1.08
NPIPA1-204ENST00000534720 PARP4Q9UKK3 1724 aaKnown RBP8.32□□□□□ -1.08
NPIPA1-204ENST00000534720 PLEKHG2Q9H7P9 1386 aa8.32□□□□□ -1.08
NPIPA1-204ENST00000534720 TRIM27P14373 513 aa8.32□□□□□ -1.08
NPIPA1-204ENST00000534720 MVPQ14764 893 aaKnown RBP8.32□□□□□ -1.08
NPIPA1-204ENST00000534720 CENPQQ7L2Z9 268 aaPredicted RBP8.32□□□□□ -1.08
NPIPA1-204ENST00000534720 FTSJ3Q8IY81 847 aaKnown RBP8.32□□□□□ -1.08
NPIPA1-204ENST00000534720 SPRYD3Q8NCJ5 442 aa8.32□□□□□ -1.08
NPIPA1-204ENST00000534720 CABLES1Q8TDN4 633 aa8.32□□□□□ -1.08
NPIPA1-204ENST00000534720 CLUAP1Q96AJ1 413 aa8.32□□□□□ -1.08
NPIPA1-204ENST00000534720 CEMIPQ8WUJ3 1361 aa8.32□□□□□ -1.08
NPIPA1-204ENST00000534720 AHDC1Q5TGY3 1603 aaPredicted RBP8.31□□□□□ -1.08
NPIPA1-204ENST00000534720 OVOS2A0A0G2JMS6 1433 aa8.31□□□□□ -1.08
NPIPA1-204ENST00000534720 AKAP4Q5JQC9 854 aa8.31□□□□□ -1.08
NPIPA1-204ENST00000534720 IL17REQ8NFR9 667 aa8.31□□□□□ -1.08
NPIPA1-204ENST00000534720 MS4A3Q96HJ5 214 aa8.31□□□□□ -1.08
NPIPA1-204ENST00000534720 TSPYL4Q9UJ04 414 aa8.31□□□□□ -1.08
NPIPA1-204ENST00000534720 N4BP2Q86UW6 1770 aaPredicted RBP8.31□□□□□ -1.08
NPIPA1-204ENST00000534720 ELL2O00472 640 aaPredicted RBP8.31□□□□□ -1.08
NPIPA1-204ENST00000534720 TAF7Q15545 349 aaPredicted RBP8.31□□□□□ -1.08
NPIPA1-204ENST00000534720 DDX19BQ9UMR2 479 aa8.31□□□□□ -1.08
NPIPA1-204ENST00000534720 SOS1Q07889 1333 aaPredicted RBP8.3□□□□□ -1.08
NPIPA1-204ENST00000534720 COL22A1Q8NFW1 1626 aaPredicted RBP8.3□□□□□ -1.08
NPIPA1-204ENST00000534720 ZNF530Q6P9A1 599 aaPredicted RBP8.3□□□□□ -1.08
NPIPA1-204ENST00000534720 ERICH6Q7L0X2 663 aa8.29□□□□□ -1.08
NPIPA1-204ENST00000534720 CHRNA2Q15822 529 aa8.29□□□□□ -1.08
NPIPA1-204ENST00000534720 C1orf141Q5JVX7 400 aa8.29□□□□□ -1.08
NPIPA1-204ENST00000534720 TMEM57Q8N5G2 664 aa8.29□□□□□ -1.08
NPIPA1-204ENST00000534720 API5Q9BZZ5 524 aaKnown RBP8.29□□□□□ -1.08
NPIPA1-204ENST00000534720 MIS18AQ9NYP9 233 aa8.29□□□□□ -1.08
NPIPA1-204ENST00000534720 PHLPP1O60346 1717 aa8.28□□□□□ -1.08
NPIPA1-204ENST00000534720 COL14A1Q05707 1796 aaKnown RBP8.28□□□□□ -1.08
NPIPA1-204ENST00000534720 TCERG1O14776 1098 aaKnown RBP8.28□□□□□ -1.08
NPIPA1-204ENST00000534720 TATP17735 454 aaPredicted RBP8.28□□□□□ -1.08
NPIPA1-204ENST00000534720 KRT24Q2M2I5 525 aa8.28□□□□□ -1.08
NPIPA1-204ENST00000534720 ITPRIPQ8IWB1 547 aa8.28□□□□□ -1.08
NPIPA1-204ENST00000534720 RAPGEF4Q8WZA2 1011 aa8.28□□□□□ -1.08
NPIPA1-204ENST00000534720 CHMP4BQ9H444 224 aaKnown RBP8.28□□□□□ -1.08
NPIPA1-204ENST00000534720 NLRP2Q9NX02 1062 aa8.28□□□□□ -1.08
NPIPA1-204ENST00000534720 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.28□□□□□ -1.08
NPIPA1-204ENST00000534720 ABCC4O15439 1325 aa8.28□□□□□ -1.08
NPIPA1-204ENST00000534720 SHANK3Q9BYB0 1731 aa8.27□□□□□ -1.08
NPIPA1-204ENST00000534720 MEGF6O75095 1541 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms