RNA–Protein interactions for RNA: ENST00000533595.5

SF3B2-214, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 5

Gene SF3B2, Length 1,081 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-214ENST00000533595 CEMIPQ8WUJ3 1361 aa19.22■□□□□ 0.67
SF3B2-214ENST00000533595 RIPK4P57078 832 aa19.22■□□□□ 0.67
SF3B2-214ENST00000533595 TEFQ10587 303 aa19.22■□□□□ 0.67
SF3B2-214ENST00000533595 MCM10Q7L590 875 aa19.22■□□□□ 0.67
SF3B2-214ENST00000533595 PALLDQ8WX93 1383 aa19.21■□□□□ 0.67
SF3B2-214ENST00000533595 TXNRD1Q16881 649 aa19.21■□□□□ 0.67
SF3B2-214ENST00000533595 PROM2Q8N271 834 aa19.21■□□□□ 0.67
SF3B2-214ENST00000533595 ASAP1Q9ULH1 1129 aa19.21■□□□□ 0.67
SF3B2-214ENST00000533595 RRP7AQ9Y3A4 280 aaKnown RBP19.21■□□□□ 0.67
SF3B2-214ENST00000533595 APAF1O14727 1248 aa19.2■□□□□ 0.66
SF3B2-214ENST00000533595 DCTN1Q14203 1278 aa19.2■□□□□ 0.66
SF3B2-214ENST00000533595 NEUROD2Q15784 382 aa19.2■□□□□ 0.66
SF3B2-214ENST00000533595 ATG3Q9NT62 314 aa19.2■□□□□ 0.66
SF3B2-214ENST00000533595 LMOD3Q0VAK6 560 aa19.19■□□□□ 0.66
SF3B2-214ENST00000533595 RREB1Q92766 1687 aa19.18■□□□□ 0.66
SF3B2-214ENST00000533595 LY75O60449 1722 aa19.18■□□□□ 0.66
SF3B2-214ENST00000533595 SLC27A3Q5K4L6 730 aa19.18■□□□□ 0.66
SF3B2-214ENST00000533595 CCNL1Q9UK58 526 aaPredicted RBP19.16■□□□□ 0.66
SF3B2-214ENST00000533595 SIPA1L3O60292 1781 aaPredicted RBP19.16■□□□□ 0.66
SF3B2-214ENST00000533595 THUMPD2Q9BTF0 503 aaKnown RBP19.15■□□□□ 0.66
SF3B2-214ENST00000533595 LRRC4BQ9NT99 713 aa19.15■□□□□ 0.66
SF3B2-214ENST00000533595 TRIM35Q9UPQ4 493 aa19.15■□□□□ 0.66
SF3B2-214ENST00000533595 SRCAPQ6ZRS2 3230 aa19.15■□□□□ 0.66
SF3B2-214ENST00000533595 NUP188Q5SRE5 1749 aa19.14■□□□□ 0.66
SF3B2-214ENST00000533595 LOC102724428A0A0B4J2F2 783 aa19.14■□□□□ 0.65
SF3B2-214ENST00000533595 BTBD11A6QL63 1104 aa19.14■□□□□ 0.65
SF3B2-214ENST00000533595 KCNQ4P56696 695 aa19.14■□□□□ 0.65
SF3B2-214ENST00000533595 SIK1P57059 783 aa19.14■□□□□ 0.65
SF3B2-214ENST00000533595 SLC39A6Q13433 755 aa19.14■□□□□ 0.65
SF3B2-214ENST00000533595 TAF7Q15545 349 aaPredicted RBP19.14■□□□□ 0.65
SF3B2-214ENST00000533595 PTCD1O75127 700 aaKnown RBP19.13■□□□□ 0.65
SF3B2-214ENST00000533595 RBM42Q9BTD8 480 aaKnown RBP19.13■□□□□ 0.65
SF3B2-214ENST00000533595 PAPPAQ13219 1627 aa19.12■□□□□ 0.65
SF3B2-214ENST00000533595 NBPF14Q5TI25 921 aa19.12■□□□□ 0.65
SF3B2-214ENST00000533595 ZNF790Q6PG37 636 aa19.12■□□□□ 0.65
SF3B2-214ENST00000533595 TTC5Q8N0Z6 440 aa19.12■□□□□ 0.65
SF3B2-214ENST00000533595 HMGB2P26583 209 aaKnown RBP19.11■□□□□ 0.65
SF3B2-214ENST00000533595 ATP6V1AP38606 617 aa19.11■□□□□ 0.65
SF3B2-214ENST00000533595 SENP3-EIF4A1A0A087X0R7 540 aa19.1■□□□□ 0.65
SF3B2-214ENST00000533595 NCBP3Q53F19 620 aaKnown RBP19.09■□□□□ 0.65
SF3B2-214ENST00000533595 SLC4A9Q96Q91 983 aa19.09■□□□□ 0.65
SF3B2-214ENST00000533595 KCPQ6ZWJ8 1503 aa19.09■□□□□ 0.65
SF3B2-214ENST00000533595 KCNQ3O43525 872 aa19.08■□□□□ 0.64
SF3B2-214ENST00000533595 ITPK1Q13572 414 aa19.08■□□□□ 0.64
SF3B2-214ENST00000533595 CCDC27Q2M243 656 aa19.08■□□□□ 0.64
SF3B2-214ENST00000533595 ANO8Q9HCE9 1232 aaPredicted RBP19.08■□□□□ 0.64
SF3B2-214ENST00000533595 STK32BQ9NY57 414 aa19.08■□□□□ 0.64
SF3B2-214ENST00000533595 MIS18AQ9NYP9 233 aa19.08■□□□□ 0.64
SF3B2-214ENST00000533595 UBR2Q8IWV8 1755 aa19.08■□□□□ 0.64
SF3B2-214ENST00000533595 ZNF831Q5JPB2 1677 aa19.08■□□□□ 0.64
SF3B2-214ENST00000533595 CALD1Q05682 793 aaKnown RBP19.07■□□□□ 0.64
SF3B2-214ENST00000533595 ZNF496Q96IT1 587 aaPredicted RBP19.07■□□□□ 0.64
SF3B2-214ENST00000533595 FMNL2Q96PY5 1086 aa19.07■□□□□ 0.64
SF3B2-214ENST00000533595 BABAM1Q9NWV8 329 aa19.07■□□□□ 0.64
SF3B2-214ENST00000533595 C5P01031 1676 aa19.07■□□□□ 0.64
SF3B2-214ENST00000533595 TAF1LQ8IZX4 1826 aa19.07■□□□□ 0.64
SF3B2-214ENST00000533595 SLC15A2Q16348 729 aa19.06■□□□□ 0.64
SF3B2-214ENST00000533595 VSIG10Q8N0Z9 540 aa19.06■□□□□ 0.64
SF3B2-214ENST00000533595 NGEFQ8N5V2 710 aa19.06■□□□□ 0.64
SF3B2-214ENST00000533595 LINC00116Q8NCU8 138 aa19.06■□□□□ 0.64
SF3B2-214ENST00000533595 SALL2Q9Y467 1007 aaPredicted RBP19.06■□□□□ 0.64
SF3B2-214ENST00000533595 R3HDM1Q15032 1099 aaKnown RBP19.05■□□□□ 0.64
SF3B2-214ENST00000533595 ZNF827Q17R98 1081 aa19.05■□□□□ 0.64
SF3B2-214ENST00000533595 WWC1Q8IX03 1113 aa19.05■□□□□ 0.64
SF3B2-214ENST00000533595 AKT1S1Q96B36 256 aa19.05■□□□□ 0.64
SF3B2-214ENST00000533595 TSPYL4Q9UJ04 414 aa19.05■□□□□ 0.64
SF3B2-214ENST00000533595 HEG1Q9ULI3 1381 aa19.05■□□□□ 0.64
SF3B2-214ENST00000533595 LAS1LQ9Y4W2 734 aaKnown RBP19.04■□□□□ 0.64
SF3B2-214ENST00000533595 KDM3BQ7LBC6 1761 aa19.04■□□□□ 0.64
SF3B2-214ENST00000533595 PSDA5PKW4 1024 aaPredicted RBP19.03■□□□□ 0.64
SF3B2-214ENST00000533595 CHL1O00533 1208 aa19.03■□□□□ 0.64
SF3B2-214ENST00000533595 DNAJC10Q8IXB1 793 aa19.03■□□□□ 0.64
SF3B2-214ENST00000533595 AK7Q96M32 723 aa19.03■□□□□ 0.64
SF3B2-214ENST00000533595 CFAP44Q96MT7 982 aa19.03■□□□□ 0.64
SF3B2-214ENST00000533595 TFCP2L1Q9NZI6 479 aa19.03■□□□□ 0.64
SF3B2-214ENST00000533595 CICQ96RK0 1608 aaPredicted RBP19.03■□□□□ 0.64
SF3B2-214ENST00000533595 C4BP0C0L5 1744 aa19.03■□□□□ 0.64
SF3B2-214ENST00000533595 TJP1Q07157 1748 aa19.03■□□□□ 0.64
SF3B2-214ENST00000533595 COL5A3P25940 1745 aaPredicted RBP19.01■□□□□ 0.63
SF3B2-214ENST00000533595 EIF4A1P60842 406 aaKnown RBP19.01■□□□□ 0.63
SF3B2-214ENST00000533595 GNAI1P63096 354 aa19.01■□□□□ 0.63
SF3B2-214ENST00000533595 RC3H1Q5TC82 1133 aaKnown RBP19.01■□□□□ 0.63
SF3B2-214ENST00000533595 TEX13AQ9BXU3 409 aaPredicted RBP19.01■□□□□ 0.63
SF3B2-214ENST00000533595 IFT57Q9NWB7 429 aa19.01■□□□□ 0.63
SF3B2-214ENST00000533595 SNRPA1P09661 255 aaKnown RBP19■□□□□ 0.63
SF3B2-214ENST00000533595 ZNF853P0CG23 659 aa19■□□□□ 0.63
SF3B2-214ENST00000533595 CNTNAP4Q9C0A0 1308 aa19■□□□□ 0.63
SF3B2-214ENST00000533595 STARD3NLO95772 234 aa18.99■□□□□ 0.63
SF3B2-214ENST00000533595 CYP19A1P11511 503 aaPredicted RBP18.99■□□□□ 0.63
SF3B2-214ENST00000533595 CRKLP46109 303 aaKnown RBP18.99■□□□□ 0.63
SF3B2-214ENST00000533595 WDR63Q8IWG1 891 aa18.99■□□□□ 0.63
SF3B2-214ENST00000533595 IL16Q14005 1332 aa18.99■□□□□ 0.63
SF3B2-214ENST00000533595 GNPATO15228 680 aa18.98■□□□□ 0.63
SF3B2-214ENST00000533595 MBIPQ9NS73 344 aa18.98■□□□□ 0.63
SF3B2-214ENST00000533595 GIGYF1O75420 1035 aaPredicted RBP18.97■□□□□ 0.63
SF3B2-214ENST00000533595 CCDC87Q9NVE4 849 aa18.97■□□□□ 0.63
SF3B2-214ENST00000533595 MYH14Q7Z406 1995 aaKnown RBP18.97■□□□□ 0.63
SF3B2-214ENST00000533595 TUBGCP6Q96RT7 1819 aa18.96■□□□□ 0.63
SF3B2-214ENST00000533595 PRAMEF22A3QJZ6 481 aa18.96■□□□□ 0.63
SF3B2-214ENST00000533595 INTS5Q6P9B9 1019 aaKnown RBP18.96■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms